Protein–RNA interactions for Protein: O43933

PEX1, Peroxisome biogenesis factor 1, humanhuman

Predictions only

Length 1,283 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PEX1O43933 KIRREL2-205ENST00000592409 2563 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
PEX1O43933 MRM2-203ENST00000440306 1570 ntAPPRIS P1 TSL 5 BASIC17.1■□□□□ 0.33
PEX1O43933 CALHM3-201ENST00000369783 1652 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
PEX1O43933 PSRC1-203ENST00000369907 1717 ntAPPRIS P3 TSL 1 (best) BASIC17.1■□□□□ 0.33
PEX1O43933 CD40-202ENST00000372285 1729 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
PEX1O43933 OSMR-202ENST00000502536 1740 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
PEX1O43933 C4orf50-202ENST00000531445 6860 ntAPPRIS P5 TSL 5 BASIC17.1■□□□□ 0.33
PEX1O43933 FCMR-201ENST00000367091 1950 ntAPPRIS P3 TSL 1 (best) BASIC17.09■□□□□ 0.33
PEX1O43933 CTSB-228ENST00000533455 2009 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
PEX1O43933 PPM1M-202ENST00000323588 2193 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
PEX1O43933 ITGAV-202ENST00000374907 6903 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
PEX1O43933 SLC2A6-201ENST00000371897 2301 ntTSL 2 BASIC17.09■□□□□ 0.33
PEX1O43933 TSC2-222ENST00000568454 5434 ntAPPRIS ALT2 TSL 2 BASIC17.09■□□□□ 0.33
PEX1O43933 DNAAF1-201ENST00000378553 2379 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
PEX1O43933 TOM1-210ENST00000449058 2389 ntAPPRIS P3 TSL 1 (best) BASIC17.09■□□□□ 0.33
PEX1O43933 AL513477.1-201ENST00000602865 2407 ntBASIC17.09■□□□□ 0.33
PEX1O43933 SEPHS2-201ENST00000478753 2551 ntAPPRIS P1 BASIC17.09■□□□□ 0.33
PEX1O43933 MAPRE1-201ENST00000375571 2623 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
PEX1O43933 ATP6V0E2-201ENST00000421974 2605 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
PEX1O43933 LRP11-201ENST00000239367 3260 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
PEX1O43933 GUCA1B-201ENST00000230361 1113 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
PEX1O43933 ISCA1-202ENST00000326094 1264 ntTSL 3 BASIC17.09■□□□□ 0.33
PEX1O43933 MED4-202ENST00000378586 931 ntAPPRIS ALT2 TSL 2 BASIC17.09■□□□□ 0.33
PEX1O43933 SDCBP2-203ENST00000381808 1261 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
PEX1O43933 NT5C2-211ENST00000470299 249 ntTSL 5 BASIC17.09■□□□□ 0.33
PEX1O43933 NEK7-207ENST00000538004 1036 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
PEX1O43933 AC027796.4-201ENST00000575741 874 ntTSL 5 BASIC17.09■□□□□ 0.33
PEX1O43933 SLF2-205ENST00000609386 891 ntAPPRIS ALT2 BASIC17.09■□□□□ 0.33
PEX1O43933 IER3-202ENST00000376377 1350 ntBASIC17.09■□□□□ 0.33
PEX1O43933 LINC01311-201ENST00000565162 1445 ntBASIC17.09■□□□□ 0.33
PEX1O43933 EEF1AKMT2-201ENST00000368836 1462 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
PEX1O43933 ARHGAP8-202ENST00000356099 1584 ntAPPRIS P3 TSL 1 (best) BASIC17.09■□□□□ 0.33
PEX1O43933 TICAM1-202ENST00000621756 1650 ntTSL 5 BASIC17.09■□□□□ 0.33
PEX1O43933 ZNF296-201ENST00000303809 1744 ntAPPRIS P2 TSL 1 (best) BASIC17.09■□□□□ 0.33
PEX1O43933 PSRC1-204ENST00000369909 1742 ntAPPRIS P3 TSL 1 (best) BASIC17.09■□□□□ 0.33
PEX1O43933 NCAPD2-201ENST00000315579 5548 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
PEX1O43933 TRMT44-201ENST00000389737 2799 ntAPPRIS P2 TSL 5 BASIC17.09■□□□□ 0.33
PEX1O43933 NPAS3-202ENST00000356141 2802 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
PEX1O43933 SH3BP5-202ENST00000383791 2822 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
PEX1O43933 SLC35G1-202ENST00000427197 2402 ntAPPRIS ALT2 TSL 1 (best) BASIC17.08■□□□□ 0.33
PEX1O43933 PARP16-202ENST00000444347 2352 ntTSL 2 BASIC17.08■□□□□ 0.33
PEX1O43933 CISD2-201ENST00000273986 2327 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
PEX1O43933 LIMS2-208ENST00000410011 2335 ntAPPRIS ALT1 TSL 1 (best) BASIC17.08■□□□□ 0.33
PEX1O43933 SLC25A45-208ENST00000527174 2138 ntAPPRIS P1 TSL 3 BASIC17.08■□□□□ 0.33
PEX1O43933 CD300A-202ENST00000360141 1858 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
PEX1O43933 AL109659.2-201ENST00000606809 1674 ntBASIC17.08■□□□□ 0.32
PEX1O43933 HAUS4-218ENST00000555986 1626 ntTSL 5 BASIC17.08■□□□□ 0.32
PEX1O43933 PRDX3-201ENST00000298510 1591 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
PEX1O43933 ARHGAP26-202ENST00000378004 9200 ntAPPRIS ALT1 TSL 1 (best) BASIC17.08■□□□□ 0.32
PEX1O43933 PHOSPHO2-201ENST00000359744 1125 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
PEX1O43933 AL161452.1-201ENST00000415062 1117 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
PEX1O43933 RASA4DP-201ENST00000460726 1199 ntBASIC17.08■□□□□ 0.32
PEX1O43933 SURF4-206ENST00000485435 1206 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
PEX1O43933 LY6E-213ENST00000522528 606 ntTSL 3 BASIC17.08■□□□□ 0.32
PEX1O43933 VENTXP5-201ENST00000523979 775 ntBASIC17.08■□□□□ 0.32
PEX1O43933 AF186192.2-201ENST00000524514 423 ntTSL 3 BASIC17.08■□□□□ 0.32
PEX1O43933 ZNF444P1-201ENST00000559497 298 ntBASIC17.08■□□□□ 0.32
PEX1O43933 C16orf74-203ENST00000602675 744 ntAPPRIS ALT2 TSL 1 (best) BASIC17.08■□□□□ 0.32
PEX1O43933 C16orf74-206ENST00000602766 832 ntAPPRIS ALT2 TSL 3 BASIC17.08■□□□□ 0.32
PEX1O43933 ZNF534-205ENST00000617900 1085 ntTSL 2 BASIC17.08■□□□□ 0.32
PEX1O43933 HYMAI.1-201ENST00000620949 238 ntBASIC17.08■□□□□ 0.32
PEX1O43933 AC112497.1-201ENST00000624824 639 ntBASIC17.08■□□□□ 0.32
PEX1O43933 SPINK2-207ENST00000631082 392 ntTSL 5 BASIC17.08■□□□□ 0.32
PEX1O43933 DNAJB6-218ENST00000634080 1005 ntTSL 2 BASIC17.08■□□□□ 0.32
PEX1O43933 WASF1-207ENST00000392589 3220 ntAPPRIS P1 TSL 5 BASIC17.08■□□□□ 0.32
PEX1O43933 AL596257.1-201ENST00000641463 2694 ntBASIC17.08■□□□□ 0.32
PEX1O43933 ABCF3-203ENST00000429586 2624 ntAPPRIS P2 TSL 1 (best) BASIC17.08■□□□□ 0.32
PEX1O43933 PPP2R2B-206ENST00000453001 2569 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
PEX1O43933 CCDC120-202ENST00000496529 2415 ntAPPRIS P3 TSL 2 BASIC17.08■□□□□ 0.32
PEX1O43933 ELMO3-203ENST00000477898 2281 ntAPPRIS ALT2 TSL 2 BASIC17.08■□□□□ 0.32
PEX1O43933 GLS2-216ENST00000610413 2296 ntTSL 5 BASIC17.08■□□□□ 0.32
PEX1O43933 MAPK14-201ENST00000229794 3779 ntAPPRIS P5 TSL 1 (best) BASIC17.08■□□□□ 0.32
PEX1O43933 FLYWCH1-203ENST00000416288 4963 ntAPPRIS P3 TSL 1 (best) BASIC17.08■□□□□ 0.32
PEX1O43933 UNC119-204ENST00000470125 2050 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
PEX1O43933 RRBP1-208ENST00000470422 2070 ntTSL 2 BASIC17.08■□□□□ 0.32
PEX1O43933 FRS2-206ENST00000549921 1952 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
PEX1O43933 SURF4-209ENST00000618229 3200 ntTSL 2 BASIC17.08■□□□□ 0.32
PEX1O43933 NFATC2-206ENST00000609943 5690 ntAPPRIS ALT2 TSL 1 (best) BASIC17.07■□□□□ 0.32
PEX1O43933 ARHGEF5-202ENST00000471847 1862 ntAPPRIS ALT2 TSL 1 (best) BASIC17.07■□□□□ 0.32
PEX1O43933 TMEM104-202ENST00000417024 1781 ntTSL 2 BASIC17.07■□□□□ 0.32
PEX1O43933 RDH8-203ENST00000591589 1715 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
PEX1O43933 TSSC4-201ENST00000333256 1686 ntAPPRIS P3 TSL 1 (best) BASIC17.07■□□□□ 0.32
PEX1O43933 ZBED3-AS1-208ENST00000512001 1668 ntTSL 3 BASIC17.07■□□□□ 0.32
PEX1O43933 GPAT2-201ENST00000359548 2761 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
PEX1O43933 PEPD-203ENST00000436370 1638 ntTSL 2 BASIC17.07■□□□□ 0.32
PEX1O43933 NDRG1-202ENST00000414097 3755 ntAPPRIS P1 TSL 2 BASIC17.07■□□□□ 0.32
PEX1O43933 VIPR1-217ENST00000543411 2681 ntTSL 2 BASIC17.07■□□□□ 0.32
PEX1O43933 FCER2-201ENST00000346664 1596 ntAPPRIS P2 TSL 1 (best) BASIC17.07■□□□□ 0.32
PEX1O43933 PRMT6-201ENST00000370078 2616 ntAPPRIS P1 BASIC17.07■□□□□ 0.32
PEX1O43933 AC010198.1-201ENST00000500076 1552 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
PEX1O43933 FCER2-205ENST00000597921 1560 ntAPPRIS P2 TSL 1 (best) BASIC17.07■□□□□ 0.32
PEX1O43933 L3HYPDH-201ENST00000247194 1527 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
PEX1O43933 PLPP4-202ENST00000398250 1521 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
PEX1O43933 NCF1B-201ENST00000423083 1516 ntTSL 2 BASIC17.07■□□□□ 0.32
PEX1O43933 FLJ38576-201ENST00000623820 2459 ntBASIC17.07■□□□□ 0.32
PEX1O43933 MTDH-201ENST00000336273 6177 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
PEX1O43933 PRR5-203ENST00000403581 2279 ntTSL 2 BASIC17.07■□□□□ 0.32
PEX1O43933 IGLL1-201ENST00000249053 716 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
PEX1O43933 COPE-201ENST00000262812 1141 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
PEX1O43933 MRPL24-202ENST00000368211 883 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Retrieved 100 of 98,524 protein–RNA pairs in 48.2 ms