Protein–RNA interactions for Protein: O43707

ACTN4, Alpha-actinin-4, humanhuman

Known RBP Predictions only

Length 911 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN4O43707 VCX3A-203ENST00000612369 812 ntAPPRIS ALT2 TSL 5 BASIC19.6■□□□□ 0.73
ACTN4O43707 LINC00847-201ENST00000501855 1871 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
ACTN4O43707 SYTL3-202ENST00000360448 2504 ntAPPRIS ALT1 TSL 5 BASIC19.6■□□□□ 0.73
ACTN4O43707 B4GALT4-216ENST00000483209 2494 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
ACTN4O43707 NOTCH3-201ENST00000263388 8666 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
ACTN4O43707 HASPIN-201ENST00000325418 2797 ntAPPRIS P1 BASIC19.6■□□□□ 0.73
ACTN4O43707 MEST-202ENST00000341441 2443 ntAPPRIS ALT1 TSL 1 (best) BASIC19.6■□□□□ 0.73
ACTN4O43707 ETV4-205ENST00000545954 1775 ntTSL 2 BASIC19.6■□□□□ 0.73
ACTN4O43707 DCP1B-201ENST00000280665 2086 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
ACTN4O43707 BCAM-206ENST00000589651 2686 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
ACTN4O43707 KLHDC7B-201ENST00000395676 2991 ntAPPRIS P1 BASIC19.59■□□□□ 0.73
ACTN4O43707 AL079303.2-201ENST00000555107 2613 ntTSL 3 BASIC19.59■□□□□ 0.73
ACTN4O43707 KAZN-208ENST00000636203 6874 ntTSL 5 BASIC19.59■□□□□ 0.73
ACTN4O43707 GABRB2-202ENST00000353437 1963 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
ACTN4O43707 TRAF2-201ENST00000247668 2264 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
ACTN4O43707 RGL3-202ENST00000393423 2278 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
ACTN4O43707 AC106886.4-201ENST00000623557 2502 ntBASIC19.59■□□□□ 0.73
ACTN4O43707 AC092053.1-201ENST00000605787 1936 ntBASIC19.59■□□□□ 0.73
ACTN4O43707 P2RX5-209ENST00000552276 1642 ntAPPRIS ALT2 TSL 5 BASIC19.59■□□□□ 0.73
ACTN4O43707 FAM120AOS-201ENST00000375412 2771 ntAPPRIS P3 TSL 1 (best) BASIC19.59■□□□□ 0.73
ACTN4O43707 ARHGEF4-206ENST00000428230 2172 ntTSL 5 BASIC19.59■□□□□ 0.73
ACTN4O43707 SEPHS1-201ENST00000327347 3273 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
ACTN4O43707 CARHSP1-201ENST00000311052 746 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
ACTN4O43707 MOS-201ENST00000311923 1041 ntAPPRIS P1 BASIC19.59■□□□□ 0.73
ACTN4O43707 ISCU-202ENST00000392807 1069 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
ACTN4O43707 MAPKAP1-208ENST00000394063 2977 ntTSL 5 BASIC19.59■□□□□ 0.73
ACTN4O43707 CLDN7-202ENST00000397317 1228 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
ACTN4O43707 C2orf82-202ENST00000409230 663 ntAPPRIS P2 TSL 3 BASIC19.59■□□□□ 0.73
ACTN4O43707 ISCU-203ENST00000431221 799 ntTSL 2 BASIC19.59■□□□□ 0.73
ACTN4O43707 LY6E-209ENST00000521003 740 ntAPPRIS P2 TSL 2 BASIC19.59■□□□□ 0.73
ACTN4O43707 MYL6-203ENST00000536128 1221 ntTSL 2 BASIC19.59■□□□□ 0.73
ACTN4O43707 AP000777.3-201ENST00000538705 491 ntTSL 3 BASIC19.59■□□□□ 0.73
ACTN4O43707 STK25P1-201ENST00000585406 838 ntBASIC19.59■□□□□ 0.73
ACTN4O43707 AC016590.1-204ENST00000586442 813 ntTSL 5 BASIC19.59■□□□□ 0.73
ACTN4O43707 AC104971.2-201ENST00000588144 1209 ntTSL 2 BASIC19.59■□□□□ 0.73
ACTN4O43707 IGFLR1-209ENST00000592537 1195 ntAPPRIS P2 TSL 1 (best) BASIC19.59■□□□□ 0.73
ACTN4O43707 AC002985.2-201ENST00000601106 957 ntTSL 4 BASIC19.59■□□□□ 0.73
ACTN4O43707 Metazoa_SRP.104-201ENST00000622099 280 ntBASIC19.59■□□□□ 0.73
ACTN4O43707 AC116407.4-201ENST00000623319 1061 ntBASIC19.59■□□□□ 0.73
ACTN4O43707 LHX3-203ENST00000619587 2698 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
ACTN4O43707 C1orf56-201ENST00000368926 2096 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
ACTN4O43707 NUP62-211ENST00000597029 2053 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
ACTN4O43707 SQOR-208ENST00000568606 1792 ntAPPRIS P1 TSL 5 BASIC19.59■□□□□ 0.73
ACTN4O43707 AL138752.2-201ENST00000540557 2591 ntAPPRIS P1 TSL 5 BASIC19.59■□□□□ 0.73
ACTN4O43707 INO80E-201ENST00000304516 1489 ntTSL 2 BASIC19.59■□□□□ 0.73
ACTN4O43707 ADAM22-202ENST00000398201 2784 ntAPPRIS ALT2 TSL 1 (best) BASIC19.59■□□□□ 0.73
ACTN4O43707 TAPBP-238ENST00000475304 1686 ntAPPRIS ALT2 TSL 5 BASIC19.59■□□□□ 0.73
ACTN4O43707 SLC9A6-208ENST00000636206 4711 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
ACTN4O43707 GDPD5-214ENST00000533784 2441 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
ACTN4O43707 PPM1H-201ENST00000228705 6353 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
ACTN4O43707 ADNP2-201ENST00000262198 5393 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
ACTN4O43707 ADCYAP1R1-203ENST00000409363 1889 ntAPPRIS ALT2 TSL 1 (best) BASIC19.58■□□□□ 0.73
ACTN4O43707 SIRT1-201ENST00000212015 4094 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
ACTN4O43707 SEPHS2-201ENST00000478753 2551 ntAPPRIS P1 BASIC19.58■□□□□ 0.73
ACTN4O43707 COLEC11-206ENST00000403096 1557 ntTSL 1 (best) BASIC19.58■□□□□ 0.73
ACTN4O43707 CCT6P1-202ENST00000442266 1317 ntTSL 2 BASIC19.58■□□□□ 0.73
ACTN4O43707 PARD3B-206ENST00000462231 2968 ntTSL 1 (best) BASIC19.58■□□□□ 0.73
ACTN4O43707 CSF1-204ENST00000369802 2484 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
ACTN4O43707 PGLS-201ENST00000252603 1028 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
ACTN4O43707 NMRK1-202ENST00000376808 1121 ntTSL 1 (best) BASIC19.58■□□□□ 0.72
ACTN4O43707 BX276092.5-203ENST00000456199 560 ntBASIC19.58■□□□□ 0.72
ACTN4O43707 AL049597.2-201ENST00000565575 961 ntBASIC19.58■□□□□ 0.72
ACTN4O43707 AL121672.3-201ENST00000608644 468 ntBASIC19.58■□□□□ 0.72
ACTN4O43707 AC005258.1-201ENST00000621615 1268 ntAPPRIS P1 TSL 2 BASIC19.58■□□□□ 0.72
ACTN4O43707 KBTBD11-201ENST00000320248 6710 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
ACTN4O43707 DPP9-AS1-201ENST00000381796 3071 ntTSL 2 BASIC19.58■□□□□ 0.72
ACTN4O43707 ST8SIA5-202ENST00000536490 1499 ntTSL 2 BASIC19.58■□□□□ 0.72
ACTN4O43707 AL353593.2-201ENST00000602529 1483 ntBASIC19.58■□□□□ 0.72
ACTN4O43707 GLIS1-202ENST00000628545 2807 ntAPPRIS ALT2 TSL 5 BASIC19.58■□□□□ 0.72
ACTN4O43707 CDKN1A-204ENST00000448526 2104 ntAPPRIS P1 TSL 3 BASIC19.58■□□□□ 0.72
ACTN4O43707 PTHLH-201ENST00000201015 1872 ntAPPRIS P3 TSL 3 BASIC19.58■□□□□ 0.72
ACTN4O43707 ACY1-206ENST00000476351 1409 ntTSL 3 BASIC19.58■□□□□ 0.72
ACTN4O43707 SPAST-202ENST00000345662 5116 ntAPPRIS ALT1 TSL 1 (best) BASIC19.58■□□□□ 0.72
ACTN4O43707 ARL13B-203ENST00000394222 2453 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
ACTN4O43707 ZFP64-205ENST00000371518 1841 ntTSL 1 (best) BASIC19.58■□□□□ 0.72
ACTN4O43707 DPEP3-201ENST00000268793 2018 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
ACTN4O43707 ABHD14B-204ENST00000461108 1397 ntTSL 2 BASIC19.57■□□□□ 0.72
ACTN4O43707 SLC27A4-202ENST00000372870 1557 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
ACTN4O43707 BAZ1A-203ENST00000382422 5775 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
ACTN4O43707 HRASLS5-206ENST00000540857 3032 ntAPPRIS ALT2 TSL 1 (best) BASIC19.57■□□□□ 0.72
ACTN4O43707 UBE3D-203ENST00000369747 1917 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
ACTN4O43707 TLE3-205ENST00000539550 2464 ntTSL 2 BASIC19.57■□□□□ 0.72
ACTN4O43707 CFAP100-201ENST00000352312 2086 ntAPPRIS P2 TSL 2 BASIC19.57■□□□□ 0.72
ACTN4O43707 NKIRAS2-207ENST00000449471 1461 ntTSL 2 BASIC19.57■□□□□ 0.72
ACTN4O43707 PFDN6-201ENST00000374606 740 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
ACTN4O43707 MPIG6B-202ENST00000375805 668 ntAPPRIS ALT2 TSL 1 (best) BASIC19.57■□□□□ 0.72
ACTN4O43707 RNF216P1-205ENST00000406089 807 ntTSL 5 BASIC19.57■□□□□ 0.72
ACTN4O43707 AC103564.2-201ENST00000432853 1299 ntBASIC19.57■□□□□ 0.72
ACTN4O43707 RNASEH2C-202ENST00000527610 835 ntTSL 2 BASIC19.57■□□□□ 0.72
ACTN4O43707 NAPSB-203ENST00000531692 561 ntTSL 2 BASIC19.57■□□□□ 0.72
ACTN4O43707 LCE1E-203ENST00000619588 267 ntAPPRIS ALT2 TSL 5 BASIC19.57■□□□□ 0.72
ACTN4O43707 WIPF1-201ENST00000272746 3028 ntAPPRIS ALT2 TSL 1 (best) BASIC19.57■□□□□ 0.72
ACTN4O43707 RNF169-201ENST00000299563 7823 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
ACTN4O43707 DYDC2-202ENST00000372197 2022 ntAPPRIS P3 TSL 1 (best) BASIC19.57■□□□□ 0.72
ACTN4O43707 HNF1B-202ENST00000614313 1819 ntTSL 5 BASIC19.57■□□□□ 0.72
ACTN4O43707 HNF1B-203ENST00000617272 1820 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
ACTN4O43707 LINC00671-201ENST00000301683 1958 ntTSL 2 BASIC19.57■□□□□ 0.72
ACTN4O43707 FAM153A-203ENST00000440605 1966 ntAPPRIS P2 TSL 1 (best) BASIC19.57■□□□□ 0.72
ACTN4O43707 POLR3E-203ENST00000418581 2529 ntTSL 2 BASIC19.57■□□□□ 0.72
ACTN4O43707 MTA1-201ENST00000331320 2876 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
Retrieved 100 of 98,524 protein–RNA pairs in 27.1 ms