Protein–RNA interactions for Protein: O43347

MSI1, RNA-binding protein Musashi homolog 1, humanhuman

Known RBP Predictions only

Length 362 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MSI1O43347 SIGLEC30P-201ENST00000455569 941 ntBASIC18.14■□□□□ 0.49
MSI1O43347 MSRA-206ENST00000521209 814 ntTSL 3 BASIC18.14■□□□□ 0.49
MSI1O43347 ORAOV1-210ENST00000539414 817 ntAPPRIS ALT1 TSL 2 BASIC18.14■□□□□ 0.49
MSI1O43347 ARAP1-AS1-201ENST00000542022 388 ntTSL 5 BASIC18.14■□□□□ 0.49
MSI1O43347 AC012640.2-201ENST00000561606 901 ntBASIC18.14■□□□□ 0.49
MSI1O43347 WDR88-203ENST00000592765 651 ntTSL 5 BASIC18.14■□□□□ 0.49
MSI1O43347 TSPY4-205ENST00000640033 663 ntAPPRIS ALT2 TSL 5 BASIC18.14■□□□□ 0.49
MSI1O43347 XYLT1-201ENST00000261381 9891 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
MSI1O43347 C1orf159-204ENST00000379339 2429 ntAPPRIS ALT2 TSL 2 BASIC18.14■□□□□ 0.49
MSI1O43347 SOWAHC-201ENST00000356454 4657 ntAPPRIS P1 BASIC18.14■□□□□ 0.49
MSI1O43347 LRCH1-201ENST00000311191 4710 ntAPPRIS ALT2 TSL 1 (best) BASIC18.14■□□□□ 0.49
MSI1O43347 SDHA-213ENST00000510361 2148 ntTSL 2 BASIC18.14■□□□□ 0.49
MSI1O43347 AC243591.1-201ENST00000452967 1364 ntBASIC18.14■□□□□ 0.49
MSI1O43347 AJUBA-202ENST00000361265 2569 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
MSI1O43347 ARHGAP22-206ENST00000435790 2595 ntAPPRIS ALT2 TSL 2 BASIC18.14■□□□□ 0.49
MSI1O43347 PCCB-209ENST00000469217 1841 ntAPPRIS ALT2 TSL 2 BASIC18.14■□□□□ 0.49
MSI1O43347 CRTC3-208ENST00000560098 1421 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
MSI1O43347 ZRSR2-201ENST00000307771 1491 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
MSI1O43347 BTG3-202ENST00000348354 1456 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
MSI1O43347 MCCC1-215ENST00000629669 2316 ntTSL 5 BASIC18.14■□□□□ 0.49
MSI1O43347 PAQR4-202ENST00000318782 2793 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
MSI1O43347 POLR3D-201ENST00000306433 1931 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
MSI1O43347 TMEM198-201ENST00000344458 2393 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
MSI1O43347 ALG3-201ENST00000397676 1528 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
MSI1O43347 ZCCHC23-201ENST00000500526 1951 ntTSL 2 BASIC18.13■□□□□ 0.49
MSI1O43347 SNTB1-201ENST00000395601 5164 ntAPPRIS P1 TSL 5 BASIC18.13■□□□□ 0.49
MSI1O43347 KRT79-201ENST00000330553 2068 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
MSI1O43347 GCAT-202ENST00000323205 1656 ntTSL 2 BASIC18.13■□□□□ 0.49
MSI1O43347 GBA2-201ENST00000378088 1672 ntTSL 2 BASIC18.13■□□□□ 0.49
MSI1O43347 SGCE-206ENST00000445866 1666 ntTSL 5 BASIC18.13■□□□□ 0.49
MSI1O43347 C6orf223-203ENST00000442114 3109 ntAPPRIS ALT2 TSL 1 (best) BASIC18.13■□□□□ 0.49
MSI1O43347 NUDT9-201ENST00000302174 1701 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
MSI1O43347 CYP2D6-204ENST00000389970 1714 ntTSL 5 BASIC18.13■□□□□ 0.49
MSI1O43347 PDZD3-202ENST00000355547 2252 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
MSI1O43347 GAL3ST1-201ENST00000338911 1782 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
MSI1O43347 SLC7A9-204ENST00000590341 1752 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
MSI1O43347 MRPL28-201ENST00000199706 1098 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
MSI1O43347 PTH2-201ENST00000270631 459 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
MSI1O43347 Metazoa_SRP.28-201ENST00000366402 260 ntBASIC18.13■□□□□ 0.49
MSI1O43347 AL589182.1-202ENST00000548416 533 ntTSL 4 BASIC18.13■□□□□ 0.49
MSI1O43347 ABHD17A-204ENST00000590661 1079 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
MSI1O43347 PPM1G-201ENST00000344034 2311 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
MSI1O43347 SAMD3-202ENST00000368134 2377 ntAPPRIS P1 TSL 2 BASIC18.13■□□□□ 0.49
MSI1O43347 GULP1-206ENST00000409830 1376 ntAPPRIS P3 TSL 1 (best) BASIC18.13■□□□□ 0.49
MSI1O43347 PABPC1L-217ENST00000537323 1910 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
MSI1O43347 NOV-201ENST00000259526 2522 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
MSI1O43347 RSRC1-211ENST00000480820 1410 ntAPPRIS P1 TSL 5 BASIC18.13■□□□□ 0.49
MSI1O43347 RNF157-201ENST00000269391 4955 ntAPPRIS P3 TSL 1 (best) BASIC18.13■□□□□ 0.49
MSI1O43347 WDR90-202ENST00000315764 1454 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
MSI1O43347 NIPAL2-202ENST00000430223 4496 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
MSI1O43347 AC068446.2-201ENST00000500487 2165 ntTSL 2 BASIC18.13■□□□□ 0.49
MSI1O43347 CSNK1D-204ENST00000398519 1580 ntTSL 5 BASIC18.13■□□□□ 0.49
MSI1O43347 SARS2-212ENST00000600042 1630 ntTSL 2 BASIC18.12■□□□□ 0.49
MSI1O43347 ZNF419-201ENST00000221735 2309 ntAPPRIS ALT2 TSL 1 (best) BASIC18.12■□□□□ 0.49
MSI1O43347 ANGPTL4-202ENST00000393962 1705 ntTSL 5 BASIC18.12■□□□□ 0.49
MSI1O43347 TMEM175-201ENST00000264771 1860 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
MSI1O43347 CLDN9-201ENST00000445369 2050 ntAPPRIS P1 BASIC18.12■□□□□ 0.49
MSI1O43347 PRR29-AS1-202ENST00000580942 2926 ntTSL 2 BASIC18.12■□□□□ 0.49
MSI1O43347 GOSR2-201ENST00000225567 1245 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
MSI1O43347 TMEM89-201ENST00000330862 662 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
MSI1O43347 INPP5A-203ENST00000368594 2967 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
MSI1O43347 FAM99B-201ENST00000382166 1067 ntTSL 5 BASIC18.12■□□□□ 0.49
MSI1O43347 HDAC11-202ENST00000402259 1000 ntTSL 3 BASIC18.12■□□□□ 0.49
MSI1O43347 VPS13A-AS1-201ENST00000415172 519 ntTSL 2 BASIC18.12■□□□□ 0.49
MSI1O43347 AC007834.1-201ENST00000446473 728 ntTSL 3 BASIC18.12■□□□□ 0.49
MSI1O43347 HFE-210ENST00000470149 1123 ntAPPRIS ALT2 TSL 1 (best) BASIC18.12■□□□□ 0.49
MSI1O43347 NDUFB2-209ENST00000472695 503 ntTSL 5 BASIC18.12■□□□□ 0.49
MSI1O43347 HOXB-AS4-202ENST00000480386 566 ntTSL 4 BASIC18.12■□□□□ 0.49
MSI1O43347 S100A2-206ENST00000497140 697 ntTSL 2 BASIC18.12■□□□□ 0.49
MSI1O43347 AC034243.1-201ENST00000520838 587 ntTSL 2 BASIC18.12■□□□□ 0.49
MSI1O43347 NCAM1-AS1-202ENST00000533638 618 ntTSL 4 BASIC18.12■□□□□ 0.49
MSI1O43347 PSME1-205ENST00000559123 1033 ntTSL 5 BASIC18.12■□□□□ 0.49
MSI1O43347 PRSS8-206ENST00000568261 1214 ntTSL 2 BASIC18.12■□□□□ 0.49
MSI1O43347 PDCD2L-203ENST00000587065 492 ntTSL 3 BASIC18.12■□□□□ 0.49
MSI1O43347 AC107918.4-202ENST00000641623 219 ntBASIC18.12■□□□□ 0.49
MSI1O43347 JMJD6-205ENST00000585429 1330 ntTSL 5 BASIC18.12■□□□□ 0.49
MSI1O43347 NEIL2-203ENST00000436750 2226 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
MSI1O43347 IQGAP2-201ENST00000274364 5844 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
MSI1O43347 TRAF3IP1-201ENST00000373327 4279 ntAPPRIS P3 TSL 1 (best) BASIC18.12■□□□□ 0.49
MSI1O43347 SSBP3-203ENST00000371319 1578 ntAPPRIS ALT1 TSL 2 BASIC18.12■□□□□ 0.49
MSI1O43347 L1CAM-205ENST00000370060 5113 ntAPPRIS P4 TSL 5 BASIC18.12■□□□□ 0.49
MSI1O43347 TMEM131-201ENST00000186436 6640 ntAPPRIS P1 TSL 5 BASIC18.12■□□□□ 0.49
MSI1O43347 RAI2-203ENST00000415486 2037 ntTSL 2 BASIC18.11■□□□□ 0.49
MSI1O43347 ANKRD29-208ENST00000592179 3361 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
MSI1O43347 TBXAS1-206ENST00000425687 2080 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
MSI1O43347 CAP2-208ENST00000611958 2686 ntTSL 2 BASIC18.11■□□□□ 0.49
MSI1O43347 TOR3A-203ENST00000367627 2724 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
MSI1O43347 TOR3A-201ENST00000352445 1182 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
MSI1O43347 OPN1LW-201ENST00000369951 1261 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
MSI1O43347 AC016999.1-201ENST00000447880 452 ntTSL 3 BASIC18.11■□□□□ 0.49
MSI1O43347 PRYP5-201ENST00000451909 266 ntBASIC18.11■□□□□ 0.49
MSI1O43347 AC069287.3-201ENST00000527297 589 ntTSL 5 BASIC18.11■□□□□ 0.49
MSI1O43347 TRMT112-203ENST00000535750 823 ntTSL 2 BASIC18.11■□□□□ 0.49
MSI1O43347 AC133919.2-201ENST00000565965 589 ntTSL 4 BASIC18.11■□□□□ 0.49
MSI1O43347 MIR22HG-204ENST00000571595 767 ntTSL 5 BASIC18.11■□□□□ 0.49
MSI1O43347 AC084125.4-201ENST00000580385 338 ntTSL 3 BASIC18.11■□□□□ 0.49
MSI1O43347 GPX4-212ENST00000616066 924 ntAPPRIS ALT1 TSL 5 BASIC18.11■□□□□ 0.49
MSI1O43347 DBNL-213ENST00000452943 1513 ntTSL 2 BASIC18.11■□□□□ 0.49
MSI1O43347 DPF3-204ENST00000546183 1514 ntTSL 2 BASIC18.11■□□□□ 0.49
MSI1O43347 SLC7A9-202ENST00000587772 1568 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Retrieved 100 of 98,524 protein–RNA pairs in 29.9 ms