Protein–RNA interactions for Protein: O43316

PAX4, Paired box protein Pax-4, humanhuman

Predictions only

Length 350 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PAX4O43316 ANAPC11-218ENST00000582222 523 ntTSL 2 BASIC12.53□□□□□ -0.4
PAX4O43316 RTBDN-213ENST00000592204 1024 ntAPPRIS ALT2 TSL 1 (best) BASIC12.53□□□□□ -0.4
PAX4O43316 SATB1-AS1-227ENST00000625533 743 ntTSL 5 BASIC12.53□□□□□ -0.4
PAX4O43316 LINC01714-202ENST00000635451 896 ntTSL 5 BASIC12.53□□□□□ -0.4
PAX4O43316 TFEB-201ENST00000230323 2354 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
PAX4O43316 TADA3-201ENST00000301964 2355 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
PAX4O43316 HSPA4-205ENST00000617074 2358 ntTSL 5 BASIC12.53□□□□□ -0.4
PAX4O43316 SMOC1-201ENST00000361956 2040 ntAPPRIS ALT1 TSL 1 (best) BASIC12.53□□□□□ -0.4
PAX4O43316 C18orf8-208ENST00000590868 2002 ntTSL 2 BASIC12.53□□□□□ -0.4
PAX4O43316 INF2-204ENST00000398337 1689 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
PAX4O43316 AC055811.2-201ENST00000427497 1693 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
PAX4O43316 SPDYE5-203ENST00000625065 1700 ntAPPRIS P2 TSL 5 BASIC12.53□□□□□ -0.4
PAX4O43316 MIB2-201ENST00000355826 3290 ntAPPRIS ALT2 TSL 1 (best) BASIC12.53□□□□□ -0.4
PAX4O43316 TRA2A-211ENST00000538367 2142 ntAPPRIS ALT2 TSL 2 BASIC12.53□□□□□ -0.4
PAX4O43316 AC016734.2-201ENST00000624325 1377 ntBASIC12.53□□□□□ -0.4
PAX4O43316 FCGRT-201ENST00000221466 1798 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
PAX4O43316 COA5-201ENST00000328709 1754 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
PAX4O43316 NRG2-205ENST00000361474 3020 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
PAX4O43316 DPYSL3-201ENST00000343218 5476 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
PAX4O43316 SDCBP2-201ENST00000339987 1404 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
PAX4O43316 POLI-207ENST00000579434 2705 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
PAX4O43316 MED29-202ENST00000594368 1471 ntTSL 2 BASIC12.53□□□□□ -0.4
PAX4O43316 SH2D3C-203ENST00000373277 2750 ntAPPRIS ALT2 TSL 1 (best) BASIC12.52□□□□□ -0.4
PAX4O43316 ARNTL-201ENST00000389707 2776 ntAPPRIS P3 TSL 1 (best) BASIC12.52□□□□□ -0.4
PAX4O43316 MAEA-219ENST00000514708 1945 ntTSL 2 BASIC12.52□□□□□ -0.4
PAX4O43316 TMEM127-201ENST00000258439 6266 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
PAX4O43316 C16orf45-201ENST00000300006 2404 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
PAX4O43316 HOTAIR-201ENST00000424518 2421 ntTSL 5 BASIC12.52□□□□□ -0.4
PAX4O43316 ITPK1-201ENST00000267615 6066 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
PAX4O43316 MAPKAPK3-201ENST00000357955 2500 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
PAX4O43316 DAGLA-201ENST00000257215 5757 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
PAX4O43316 AL079301.1-201ENST00000424580 1633 ntTSL 2 BASIC12.52□□□□□ -0.4
PAX4O43316 NME9-203ENST00000383180 2133 ntTSL 2 BASIC12.52□□□□□ -0.4
PAX4O43316 NFATC4-204ENST00000424781 5488 ntAPPRIS ALT2 TSL 1 (best) BASIC12.52□□□□□ -0.4
PAX4O43316 PSRC1-201ENST00000369903 1710 ntAPPRIS P3 TSL 5 BASIC12.52□□□□□ -0.41
PAX4O43316 LINC00683-201ENST00000578803 2221 ntTSL 2 BASIC12.52□□□□□ -0.41
PAX4O43316 CEP170B-202ENST00000414716 6705 ntAPPRIS P2 TSL 1 (best) BASIC12.52□□□□□ -0.41
PAX4O43316 DCAF17-202ENST00000375255 5828 ntAPPRIS P3 TSL 1 (best) BASIC12.52□□□□□ -0.41
PAX4O43316 GPR32-201ENST00000270590 1269 ntAPPRIS P1 BASIC12.52□□□□□ -0.41
PAX4O43316 CARHSP1-201ENST00000311052 746 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
PAX4O43316 TYMSOS-201ENST00000323813 844 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
PAX4O43316 OARD1-201ENST00000373154 1129 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
PAX4O43316 C1QC-203ENST00000374640 1163 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
PAX4O43316 CATIP-AS1-202ENST00000441749 480 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
PAX4O43316 C16orf91-201ENST00000442039 978 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
PAX4O43316 GOLGA2P7-203ENST00000557881 896 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
PAX4O43316 HOXB8-203ENST00000576562 743 ntAPPRIS ALT1 TSL 2 BASIC12.52□□□□□ -0.41
PAX4O43316 NBPF14-202ENST00000593495 1082 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
PAX4O43316 Metazoa_SRP.33-201ENST00000613468 285 ntBASIC12.52□□□□□ -0.41
PAX4O43316 AC012183.1-201ENST00000625197 499 ntBASIC12.52□□□□□ -0.41
PAX4O43316 AC005906.2-206ENST00000638180 1029 ntTSL 5 BASIC12.52□□□□□ -0.41
PAX4O43316 ZNF48-205ENST00000613509 3339 ntAPPRIS P1 TSL 2 BASIC12.52□□□□□ -0.41
PAX4O43316 AC067852.2-201ENST00000590513 2313 ntBASIC12.52□□□□□ -0.41
PAX4O43316 MARK2-207ENST00000502399 2885 ntAPPRIS ALT2 TSL 5 BASIC12.52□□□□□ -0.41
PAX4O43316 FNDC1-201ENST00000297267 6552 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
PAX4O43316 GOLGA2P10-204ENST00000618004 1349 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
PAX4O43316 EPM2A-201ENST00000367519 3465 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
PAX4O43316 TP53INP1-201ENST00000342697 5638 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
PAX4O43316 STOML1-204ENST00000541638 6336 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
PAX4O43316 SEMA6C-209ENST00000613223 1950 ntTSL 5 BASIC12.52□□□□□ -0.41
PAX4O43316 CDC25A-202ENST00000351231 3663 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
PAX4O43316 BRD2-202ENST00000374831 4807 ntAPPRIS P3 TSL 1 (best) BASIC12.52□□□□□ -0.41
PAX4O43316 VGLL4-210ENST00000426568 1428 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
PAX4O43316 TNR-201ENST00000263525 5190 ntAPPRIS P1 TSL 5 BASIC12.52□□□□□ -0.41
PAX4O43316 CYP2D7-208ENST00000614967 1504 ntTSL 5 BASIC12.52□□□□□ -0.41
PAX4O43316 FAM208A-201ENST00000355628 5239 ntAPPRIS ALT2 TSL 1 (best) BASIC12.52□□□□□ -0.41
PAX4O43316 LINC00937-205ENST00000538304 2157 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
PAX4O43316 TMEM229B-201ENST00000357461 4068 ntAPPRIS P1 TSL 2 BASIC12.52□□□□□ -0.41
PAX4O43316 AC134043.2-201ENST00000624206 2238 ntBASIC12.52□□□□□ -0.41
PAX4O43316 FAM53B-202ENST00000337318 5431 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
PAX4O43316 LRRC23-209ENST00000443597 1628 ntAPPRIS P4 TSL 1 (best) BASIC12.51□□□□□ -0.41
PAX4O43316 AC012317.2-201ENST00000623305 2251 ntBASIC12.51□□□□□ -0.41
PAX4O43316 SMC4-204ENST00000462787 5033 ntTSL 2 BASIC12.51□□□□□ -0.41
PAX4O43316 PIGQ-203ENST00000321878 3006 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
PAX4O43316 AC069281.2-201ENST00000485071 4401 ntTSL 2 BASIC12.51□□□□□ -0.41
PAX4O43316 PACRGL-203ENST00000444671 1720 ntTSL 2 BASIC12.51□□□□□ -0.41
PAX4O43316 AC009041.2-206ENST00000563863 1728 ntTSL 2 BASIC12.51□□□□□ -0.41
PAX4O43316 LEXM-201ENST00000358193 1777 ntAPPRIS P3 TSL 1 (best) BASIC12.51□□□□□ -0.41
PAX4O43316 TRAPPC12-201ENST00000324266 2508 ntAPPRIS P2 TSL 1 (best) BASIC12.51□□□□□ -0.41
PAX4O43316 RAB4B-EGLN2-201ENST00000594136 2554 ntAPPRIS P1 TSL 2 BASIC12.51□□□□□ -0.41
PAX4O43316 MPP2-206ENST00000518766 1896 ntTSL 2 BASIC12.51□□□□□ -0.41
PAX4O43316 ACTB-201ENST00000331789 1917 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
PAX4O43316 WDR25-202ENST00000402312 1969 ntAPPRIS P1 TSL 2 BASIC12.51□□□□□ -0.41
PAX4O43316 NPHP3-201ENST00000337331 4362 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
PAX4O43316 CEP170B-203ENST00000453495 6813 ntAPPRIS ALT2 TSL 5 BASIC12.51□□□□□ -0.41
PAX4O43316 TRIM8-201ENST00000302424 2831 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
PAX4O43316 BPGM-202ENST00000393132 2051 ntAPPRIS P1 TSL 5 BASIC12.51□□□□□ -0.41
PAX4O43316 MRPS34-201ENST00000177742 1040 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
PAX4O43316 STRA8-201ENST00000275764 993 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
PAX4O43316 LCE1D-201ENST00000326233 430 ntAPPRIS P1 TSL 5 BASIC12.51□□□□□ -0.41
PAX4O43316 DDX43P3-201ENST00000441064 443 ntBASIC12.51□□□□□ -0.41
PAX4O43316 RN7SL606P-201ENST00000472779 293 ntBASIC12.51□□□□□ -0.41
PAX4O43316 AC113382.1-201ENST00000500267 1253 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
PAX4O43316 TFF3-204ENST00000518498 1109 ntAPPRIS P2 TSL 1 (best) BASIC12.51□□□□□ -0.41
PAX4O43316 AC140504.1-202ENST00000568222 652 ntTSL 5 BASIC12.51□□□□□ -0.41
PAX4O43316 NUTF2-205ENST00000568396 1179 ntAPPRIS P1 TSL 3 BASIC12.51□□□□□ -0.41
PAX4O43316 DCTPP1-204ENST00000568434 853 ntTSL 2 BASIC12.51□□□□□ -0.41
PAX4O43316 AC016590.1-204ENST00000586442 813 ntTSL 5 BASIC12.51□□□□□ -0.41
PAX4O43316 AC004130.1-202ENST00000603156 666 ntTSL 2 BASIC12.51□□□□□ -0.41
PAX4O43316 AC093458.2-201ENST00000623150 629 ntBASIC12.51□□□□□ -0.41
Retrieved 100 of 98,524 protein–RNA pairs in 27.1 ms