Protein–RNA interactions for Protein: O15439

ABCC4, Multidrug resistance-associated protein 4, humanhuman

Predictions only

Length 1,325 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ABCC4O15439 PARD3-205ENST00000374773 3420 ntTSL 5 BASIC22.16■■□□□ 1.14
ABCC4O15439 CHRNG-201ENST00000389492 1398 ntTSL 1 (best) BASIC22.16■■□□□ 1.14
ABCC4O15439 PSMC3IP-204ENST00000587209 1381 ntTSL 1 (best) BASIC22.16■■□□□ 1.14
ABCC4O15439 PGM5-202ENST00000396396 3338 ntAPPRIS P1 TSL 2 BASIC22.15■■□□□ 1.14
ABCC4O15439 DTX2-202ENST00000413936 2472 ntAPPRIS P3 TSL 1 (best) BASIC22.15■■□□□ 1.14
ABCC4O15439 ARPP19-201ENST00000249822 5301 ntAPPRIS P1 TSL 1 (best) BASIC22.15■■□□□ 1.14
ABCC4O15439 HTR1A-201ENST00000323865 1778 ntAPPRIS P1 BASIC22.15■■□□□ 1.14
ABCC4O15439 TTC29-201ENST00000325106 1785 ntAPPRIS P3 TSL 1 (best) BASIC22.15■■□□□ 1.14
ABCC4O15439 MAST2-201ENST00000361297 5738 ntAPPRIS P1 TSL 1 (best) BASIC22.15■■□□□ 1.14
ABCC4O15439 INIP-202ENST00000374236 874 ntTSL 2 BASIC22.15■■□□□ 1.14
ABCC4O15439 KRT18P3-201ENST00000451602 1288 ntBASIC22.15■■□□□ 1.14
ABCC4O15439 BX005266.1-201ENST00000473402 457 ntBASIC22.15■■□□□ 1.14
ABCC4O15439 ANKRD13D-218ENST00000515828 1111 ntTSL 1 (best) BASIC22.15■■□□□ 1.14
ABCC4O15439 FLJ20021-201ENST00000527564 790 ntTSL 2 BASIC22.15■■□□□ 1.14
ABCC4O15439 AP005233.2-201ENST00000561588 372 ntTSL 3 BASIC22.15■■□□□ 1.14
ABCC4O15439 BEAN1-203ENST00000561796 1078 ntAPPRIS P2 TSL 1 (best) BASIC22.15■■□□□ 1.14
ABCC4O15439 AC010327.4-202ENST00000591484 748 ntBASIC22.15■■□□□ 1.14
ABCC4O15439 HEXIM2-207ENST00000592695 1246 ntAPPRIS P1 TSL 1 (best) BASIC22.15■■□□□ 1.14
ABCC4O15439 AL691403.2-201ENST00000618460 490 ntBASIC22.15■■□□□ 1.14
ABCC4O15439 DHX33-202ENST00000433302 2225 ntTSL 1 (best) BASIC22.15■■□□□ 1.14
ABCC4O15439 NUDT9-201ENST00000302174 1701 ntAPPRIS P1 TSL 1 (best) BASIC22.15■■□□□ 1.14
ABCC4O15439 PDE9A-203ENST00000335440 1728 ntTSL 1 (best) BASIC22.15■■□□□ 1.14
ABCC4O15439 MTG1-201ENST00000317502 1560 ntAPPRIS P1 TSL 1 (best) BASIC22.15■■□□□ 1.14
ABCC4O15439 LGMN-216ENST00000557434 1797 ntTSL 5 BASIC22.15■■□□□ 1.14
ABCC4O15439 LMNA-205ENST00000368299 2253 ntTSL 1 (best) BASIC22.14■■□□□ 1.14
ABCC4O15439 SNX16-201ENST00000345957 1853 ntAPPRIS P1 TSL 1 (best) BASIC22.14■■□□□ 1.14
ABCC4O15439 AC116353.5-201ENST00000638148 1699 ntBASIC22.14■■□□□ 1.14
ABCC4O15439 ELOF1-201ENST00000252445 1019 ntAPPRIS P1 TSL 2 BASIC22.14■■□□□ 1.14
ABCC4O15439 MCL1-201ENST00000307940 1110 ntTSL 1 (best) BASIC22.14■■□□□ 1.14
ABCC4O15439 UXT-202ENST00000335890 701 ntTSL 1 (best) BASIC22.14■■□□□ 1.14
ABCC4O15439 DNAH14-205ENST00000366850 1103 ntTSL 5 BASIC22.14■■□□□ 1.14
ABCC4O15439 IMP4-203ENST00000409935 958 ntTSL 5 BASIC22.14■■□□□ 1.14
ABCC4O15439 CXorf67-201ENST00000342995 1929 ntAPPRIS P1 BASIC22.14■■□□□ 1.14
ABCC4O15439 A4GALT-202ENST00000381278 1935 ntAPPRIS P1 TSL 5 BASIC22.14■■□□□ 1.14
ABCC4O15439 PPIF-201ENST00000225174 2190 ntAPPRIS P1 TSL 1 (best) BASIC22.14■■□□□ 1.13
ABCC4O15439 HSP90B1-210ENST00000614327 1338 ntTSL 1 (best) BASIC22.14■■□□□ 1.13
ABCC4O15439 AC138969.1-205ENST00000381497 1552 ntAPPRIS P1 TSL 1 (best) BASIC22.14■■□□□ 1.13
ABCC4O15439 ABCB8-211ENST00000477092 1596 ntTSL 5 BASIC22.14■■□□□ 1.13
ABCC4O15439 HNRNPM-217ENST00000620401 2458 ntAPPRIS ALT2 TSL 1 (best) BASIC22.14■■□□□ 1.13
ABCC4O15439 ADSL-202ENST00000342312 1808 ntTSL 1 (best) BASIC22.14■■□□□ 1.13
ABCC4O15439 RHOBTB3-201ENST00000379982 5537 ntAPPRIS P1 TSL 1 (best) BASIC22.14■■□□□ 1.13
ABCC4O15439 PILRB-208ENST00000452089 2099 ntAPPRIS P2 TSL 2 BASIC22.14■■□□□ 1.13
ABCC4O15439 AC079776.2-201ENST00000641154 1609 ntBASIC22.14■■□□□ 1.13
ABCC4O15439 DVL2-201ENST00000005340 3018 ntAPPRIS P2 TSL 1 (best) BASIC22.14■■□□□ 1.13
ABCC4O15439 PABPC1L-201ENST00000217073 1851 ntAPPRIS P1 TSL 5 BASIC22.14■■□□□ 1.13
ABCC4O15439 TSPAN17-201ENST00000298564 2810 ntTSL 2 BASIC22.14■■□□□ 1.13
ABCC4O15439 GLS-201ENST00000320717 4834 ntAPPRIS P3 TSL 1 (best) BASIC22.13■■□□□ 1.13
ABCC4O15439 AEBP2-201ENST00000266508 3620 ntAPPRIS ALT2 TSL 1 (best) BASIC22.13■■□□□ 1.13
ABCC4O15439 EML3-212ENST00000494176 2901 ntTSL 2 BASIC22.13■■□□□ 1.13
ABCC4O15439 EML3-216ENST00000529309 2909 ntTSL 2 BASIC22.13■■□□□ 1.13
ABCC4O15439 GPN3-202ENST00000537466 1491 ntTSL 1 (best) BASIC22.13■■□□□ 1.13
ABCC4O15439 ERBB2-205ENST00000578199 2526 ntTSL 1 (best) BASIC22.13■■□□□ 1.13
ABCC4O15439 TMPRSS5-207ENST00000540540 2001 ntTSL 2 BASIC22.13■■□□□ 1.13
ABCC4O15439 RUVBL1-201ENST00000322623 1761 ntAPPRIS P1 TSL 1 (best) BASIC22.13■■□□□ 1.13
ABCC4O15439 MOSPD3-201ENST00000223054 1053 ntAPPRIS P1 TSL 2 BASIC22.13■■□□□ 1.13
ABCC4O15439 CENPM-203ENST00000402338 1002 ntTSL 2 BASIC22.13■■□□□ 1.13
ABCC4O15439 CHMP3-203ENST00000409225 1099 ntTSL 2 BASIC22.13■■□□□ 1.13
ABCC4O15439 UPF3AP3-201ENST00000420996 769 ntBASIC22.13■■□□□ 1.13
ABCC4O15439 LAGE3P1-201ENST00000425356 484 ntBASIC22.13■■□□□ 1.13
ABCC4O15439 NDUFB2-208ENST00000471136 499 ntTSL 3 BASIC22.13■■□□□ 1.13
ABCC4O15439 FAM172A-207ENST00000509739 1031 ntTSL 2 BASIC22.13■■□□□ 1.13
ABCC4O15439 RPS29-206ENST00000557111 488 ntTSL 2 BASIC22.13■■□□□ 1.13
ABCC4O15439 CCDC144A-210ENST00000456009 2306 ntTSL 5 BASIC22.13■■□□□ 1.13
ABCC4O15439 BMP1-202ENST00000306385 4229 ntAPPRIS P1 TSL 1 (best) BASIC22.13■■□□□ 1.13
ABCC4O15439 LMO4-202ENST00000370544 5405 ntAPPRIS P1 TSL 1 (best) BASIC22.13■■□□□ 1.13
ABCC4O15439 IRF5-210ENST00000477535 1374 ntTSL 1 (best) BASIC22.13■■□□□ 1.13
ABCC4O15439 FOXD4L4-201ENST00000377413 2230 ntAPPRIS P1 BASIC22.13■■□□□ 1.13
ABCC4O15439 MAP3K13-212ENST00000448876 1681 ntTSL 1 (best) BASIC22.13■■□□□ 1.13
ABCC4O15439 NETO1-201ENST00000327305 3058 ntAPPRIS P1 TSL 1 (best) BASIC22.13■■□□□ 1.13
ABCC4O15439 CBWD1-202ENST00000356521 1706 ntAPPRIS P1 TSL 1 (best) BASIC22.13■■□□□ 1.13
ABCC4O15439 PTPN6-204ENST00000456013 2389 ntTSL 1 (best) BASIC22.13■■□□□ 1.13
ABCC4O15439 TFAP2A-AS1-201ENST00000420777 1575 ntTSL 5 BASIC22.12■■□□□ 1.13
ABCC4O15439 RPSAP43-201ENST00000402237 625 ntBASIC22.12■■□□□ 1.13
ABCC4O15439 ZGLP1-201ENST00000403352 1028 ntAPPRIS ALT2 TSL 5 BASIC22.12■■□□□ 1.13
ABCC4O15439 GPX1P2-201ENST00000429271 606 ntBASIC22.12■■□□□ 1.13
ABCC4O15439 AC012363.1-201ENST00000455707 575 ntTSL 4 BASIC22.12■■□□□ 1.13
ABCC4O15439 STK19B-204ENST00000512515 211 ntBASIC22.12■■□□□ 1.13
ABCC4O15439 AC091182.1-202ENST00000518765 713 ntTSL 2 BASIC22.12■■□□□ 1.13
ABCC4O15439 AC034243.1-201ENST00000520838 587 ntTSL 2 BASIC22.12■■□□□ 1.13
ABCC4O15439 AC127496.4-201ENST00000571591 549 ntTSL 4 BASIC22.12■■□□□ 1.13
ABCC4O15439 CTSB-232ENST00000534510 1989 ntAPPRIS P1 TSL 5 BASIC22.12■■□□□ 1.13
ABCC4O15439 TAF1C-222ENST00000570117 2349 ntAPPRIS ALT2 TSL 2 BASIC22.12■■□□□ 1.13
ABCC4O15439 GOLGA6L2-204ENST00000567107 3030 ntAPPRIS P2 TSL 5 BASIC22.12■■□□□ 1.13
ABCC4O15439 RTN4-204ENST00000357732 2390 ntTSL 1 (best) BASIC22.12■■□□□ 1.13
ABCC4O15439 FOXP3-206ENST00000557224 1371 ntTSL 2 BASIC22.12■■□□□ 1.13
ABCC4O15439 ACTRT2-201ENST00000378404 1421 ntAPPRIS P1 BASIC22.12■■□□□ 1.13
ABCC4O15439 AC016396.2-201ENST00000562575 1417 ntBASIC22.12■■□□□ 1.13
ABCC4O15439 CRB3-203ENST00000598494 1443 ntAPPRIS ALT2 TSL 2 BASIC22.12■■□□□ 1.13
ABCC4O15439 NFATC1-210ENST00000587635 2195 ntTSL 1 (best) BASIC22.12■■□□□ 1.13
ABCC4O15439 WDR90-202ENST00000315764 1454 ntTSL 1 (best) BASIC22.12■■□□□ 1.13
ABCC4O15439 TNIP1-211ENST00000521591 2274 ntAPPRIS P3 TSL 1 (best) BASIC22.12■■□□□ 1.13
ABCC4O15439 DNM1P34-201ENST00000567292 2276 ntTSL 1 (best) BASIC22.12■■□□□ 1.13
ABCC4O15439 HMBS-203ENST00000442944 1548 ntTSL 5 BASIC22.12■■□□□ 1.13
ABCC4O15439 SNAP23-201ENST00000249647 2687 ntAPPRIS P1 TSL 1 (best) BASIC22.12■■□□□ 1.13
ABCC4O15439 CLDN7-203ENST00000538261 1923 ntTSL 5 BASIC22.12■■□□□ 1.13
ABCC4O15439 GPR149-201ENST00000389740 2323 ntAPPRIS P1 TSL 1 (best) BASIC22.12■■□□□ 1.13
ABCC4O15439 CDH22-203ENST00000537909 3902 ntAPPRIS P1 TSL 2 BASIC22.12■■□□□ 1.13
ABCC4O15439 EGR3-204ENST00000522910 1553 ntAPPRIS ALT1 TSL 2 BASIC22.12■■□□□ 1.13
ABCC4O15439 GCAT-202ENST00000323205 1656 ntTSL 2 BASIC22.11■■□□□ 1.13
ABCC4O15439 CYP2D6-203ENST00000360608 1684 ntAPPRIS P1 TSL 1 (best) BASIC22.11■■□□□ 1.13
Retrieved 100 of 98,524 protein–RNA pairs in 57.5 ms