Protein–RNA interactions for Protein: O14646

CHD1, Chromodomain-helicase-DNA-binding protein 1, humanhuman

Predictions only

Length 1,710 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHD1O14646 PRAF2-201ENST00000376386 801 ntTSL 2 BASIC27.87■■■□□ 2.05
CHD1O14646 FAM166B-201ENST00000399742 958 ntAPPRIS P1 TSL 1 (best) BASIC27.87■■■□□ 2.05
CHD1O14646 AL353779.1-201ENST00000434793 351 ntBASIC27.87■■■□□ 2.05
CHD1O14646 GALT-202ENST00000450095 1280 ntTSL 2 BASIC27.87■■■□□ 2.05
CHD1O14646 NECAP2-203ENST00000457722 935 ntTSL 2 BASIC27.87■■■□□ 2.05
CHD1O14646 BANF1P1-201ENST00000553684 263 ntBASIC27.87■■■□□ 2.05
CHD1O14646 NKG7-205ENST00000600427 520 ntTSL 3 BASIC27.87■■■□□ 2.05
CHD1O14646 PGPEP1-209ENST00000604499 769 ntTSL 5 BASIC27.87■■■□□ 2.05
CHD1O14646 OPN5-206ENST00000638973 1090 ntTSL 5 BASIC27.87■■■□□ 2.05
CHD1O14646 TEAD4-202ENST00000359864 1690 ntAPPRIS P1 TSL 1 (best) BASIC27.87■■■□□ 2.05
CHD1O14646 CLDN5-201ENST00000403084 2357 ntBASIC27.87■■■□□ 2.05
CHD1O14646 FAM66B-202ENST00000606573 2630 ntTSL 1 (best) BASIC27.87■■■□□ 2.05
CHD1O14646 PSMB8-203ENST00000395339 1025 ntTSL 3 BASIC27.87■■■□□ 2.05
CHD1O14646 DFFBP1-201ENST00000433250 979 ntBASIC27.87■■■□□ 2.05
CHD1O14646 ROPN1-207ENST00000484329 566 ntTSL 3 BASIC27.87■■■□□ 2.05
CHD1O14646 FAM57B-201ENST00000279389 1481 ntTSL 1 (best) BASIC27.86■■■□□ 2.05
CHD1O14646 GTF2H4-202ENST00000376316 1673 ntAPPRIS P1 TSL 5 BASIC27.86■■■□□ 2.05
CHD1O14646 AC016027.1-202ENST00000607927 1699 ntBASIC27.86■■■□□ 2.05
CHD1O14646 AL391825.1-201ENST00000457671 1364 ntBASIC27.86■■■□□ 2.05
CHD1O14646 AC126763.1-201ENST00000552015 2118 ntBASIC27.86■■■□□ 2.05
CHD1O14646 FKBPL-201ENST00000375156 1345 ntAPPRIS P1 TSL 1 (best) BASIC27.86■■■□□ 2.05
CHD1O14646 HARS2-206ENST00000508522 1562 ntTSL 2 BASIC27.86■■■□□ 2.05
CHD1O14646 POLDIP3-202ENST00000339677 783 ntTSL 1 (best) BASIC27.86■■■□□ 2.05
CHD1O14646 MFAP2-201ENST00000375534 970 ntAPPRIS P1 TSL 2 BASIC27.86■■■□□ 2.05
CHD1O14646 NDUFA3-204ENST00000391764 267 ntTSL 3 BASIC27.86■■■□□ 2.05
CHD1O14646 BX276092.7-202ENST00000422194 696 ntTSL 3 BASIC27.86■■■□□ 2.05
CHD1O14646 AC092691.1-201ENST00000484092 554 ntTSL 4 BASIC27.86■■■□□ 2.05
CHD1O14646 CD63-208ENST00000549117 1233 ntAPPRIS P1 TSL 3 BASIC27.86■■■□□ 2.05
CHD1O14646 AL122035.1-201ENST00000556640 550 ntTSL 2 BASIC27.86■■■□□ 2.05
CHD1O14646 ARRB1-201ENST00000360025 1895 ntAPPRIS P3 TSL 1 (best) BASIC27.85■■■□□ 2.05
CHD1O14646 NPM2-203ENST00000397940 1874 ntAPPRIS P2 TSL 2 BASIC27.85■■■□□ 2.05
CHD1O14646 NR1H3-202ENST00000405576 1352 ntTSL 5 BASIC27.85■■■□□ 2.05
CHD1O14646 LGALS9C-201ENST00000328114 1730 ntAPPRIS P2 TSL 1 (best) BASIC27.85■■■□□ 2.05
CHD1O14646 NDUFS7-210ENST00000539480 1743 ntTSL 2 BASIC27.85■■■□□ 2.05
CHD1O14646 NDUFB7-201ENST00000215565 531 ntAPPRIS P1 TSL 1 (best) BASIC27.85■■■□□ 2.05
CHD1O14646 SCAND1-201ENST00000305978 902 ntAPPRIS P1 TSL 1 (best) BASIC27.85■■■□□ 2.05
CHD1O14646 ZDHHC12-201ENST00000372663 1129 ntAPPRIS P1 TSL 1 (best) BASIC27.85■■■□□ 2.05
CHD1O14646 IL32-232ENST00000552356 623 ntAPPRIS ALT2 TSL 3 BASIC27.85■■■□□ 2.05
CHD1O14646 SNX11-201ENST00000359238 2315 ntAPPRIS P1 TSL 1 (best) BASIC27.85■■■□□ 2.05
CHD1O14646 TFAP2A-202ENST00000379608 2576 ntAPPRIS ALT1 TSL 1 (best) BASIC27.85■■■□□ 2.05
CHD1O14646 PRSS53-201ENST00000280606 2181 ntAPPRIS P1 TSL 1 (best) BASIC27.85■■■□□ 2.05
CHD1O14646 ETV4-205ENST00000545954 1775 ntTSL 2 BASIC27.85■■■□□ 2.05
CHD1O14646 TDH-201ENST00000525246 1357 ntTSL 1 (best) BASIC27.85■■■□□ 2.05
CHD1O14646 RPAP3-203ENST00000432584 2133 ntTSL 2 BASIC27.85■■■□□ 2.05
CHD1O14646 NPFFR2-201ENST00000308744 1922 ntTSL 1 (best) BASIC27.85■■■□□ 2.05
CHD1O14646 VASH1-203ENST00000554237 1462 ntTSL 1 (best) BASIC27.84■■■□□ 2.05
CHD1O14646 AC007541.1-201ENST00000570282 1469 ntBASIC27.84■■■□□ 2.05
CHD1O14646 RNF32-201ENST00000311822 1842 ntTSL 1 (best) BASIC27.84■■■□□ 2.05
CHD1O14646 ZNF138-201ENST00000307355 1141 ntAPPRIS ALT2 TSL 4 BASIC27.84■■■□□ 2.05
CHD1O14646 ANKRD19P-201ENST00000338192 862 ntBASIC27.84■■■□□ 2.05
CHD1O14646 PTHLH-207ENST00000539239 890 ntAPPRIS ALT1 TSL 5 BASIC27.84■■■□□ 2.05
CHD1O14646 USB1-203ENST00000539737 1212 ntTSL 2 BASIC27.84■■■□□ 2.05
CHD1O14646 AC018529.1-201ENST00000613063 361 ntBASIC27.84■■■□□ 2.05
CHD1O14646 CDC42EP4-209ENST00000630622 240 ntTSL 5 BASIC27.84■■■□□ 2.05
CHD1O14646 TMEM216-203ENST00000515837 1958 ntAPPRIS P2 TSL 2 BASIC27.84■■■□□ 2.05
CHD1O14646 TRNT1-205ENST00000402675 1935 ntTSL 2 BASIC27.84■■■□□ 2.05
CHD1O14646 REEP2-201ENST00000254901 2099 ntAPPRIS P3 TSL 1 (best) BASIC27.84■■■□□ 2.05
CHD1O14646 AC008969.1-203ENST00000313957 1897 ntTSL 2 BASIC27.84■■■□□ 2.05
CHD1O14646 RGS20-201ENST00000276500 1664 ntAPPRIS P1 TSL 1 (best) BASIC27.84■■■□□ 2.05
CHD1O14646 ZDHHC14-204ENST00000414563 3134 ntTSL 1 (best) BASIC27.84■■■□□ 2.05
CHD1O14646 MON1B-202ENST00000439557 1759 ntTSL 2 BASIC27.84■■■□□ 2.05
CHD1O14646 TM4SF19-204ENST00000454715 1061 ntTSL 1 (best) BASIC27.84■■■□□ 2.05
CHD1O14646 XRCC3-210ENST00000554974 575 ntTSL 4 BASIC27.84■■■□□ 2.05
CHD1O14646 BRAF-201ENST00000288602 2480 ntAPPRIS P1 TSL 1 (best) BASIC27.83■■■□□ 2.05
CHD1O14646 AC046185.3-201ENST00000623228 1824 ntBASIC27.83■■■□□ 2.05
CHD1O14646 FHAD1-205ENST00000375997 1459 ntTSL 3 BASIC27.83■■■□□ 2.05
CHD1O14646 RDM1-227ENST00000619876 1491 ntAPPRIS ALT2 TSL 2 BASIC27.83■■■□□ 2.05
CHD1O14646 KCNJ5-201ENST00000338350 1734 ntAPPRIS P1 TSL 1 (best) BASIC27.83■■■□□ 2.05
CHD1O14646 PAK4-209ENST00000599470 1715 ntTSL 1 (best) BASIC27.83■■■□□ 2.05
CHD1O14646 FAM217A-201ENST00000274673 2265 ntAPPRIS P1 TSL 1 (best) BASIC27.83■■■□□ 2.05
CHD1O14646 CMA1-201ENST00000206446 633 ntTSL 1 (best) BASIC27.83■■■□□ 2.05
CHD1O14646 MRPS6-201ENST00000399312 990 ntAPPRIS P1 TSL 1 (best) BASIC27.83■■■□□ 2.05
CHD1O14646 RAC2-203ENST00000405484 842 ntAPPRIS ALT1 TSL 3 BASIC27.83■■■□□ 2.05
CHD1O14646 SPDYE18-201ENST00000510091 1050 ntBASIC27.83■■■□□ 2.05
CHD1O14646 AC008115.1-201ENST00000542291 150 ntTSL 1 (best) BASIC27.83■■■□□ 2.05
CHD1O14646 BARD1-209ENST00000613192 703 ntTSL 1 (best) BASIC27.83■■■□□ 2.05
CHD1O14646 SFT2D2-204ENST00000630869 1073 ntTSL 4 BASIC27.83■■■□□ 2.05
CHD1O14646 NLRP6-201ENST00000312165 2679 ntAPPRIS P3 TSL 1 (best) BASIC27.83■■■□□ 2.05
CHD1O14646 AC012569.1-201ENST00000591191 1524 ntBASIC27.83■■■□□ 2.05
CHD1O14646 BCL2L12-203ENST00000441864 1371 ntAPPRIS ALT2 TSL 1 (best) BASIC27.83■■■□□ 2.05
CHD1O14646 PILRB-207ENST00000448382 2314 ntTSL 2 BASIC27.83■■■□□ 2.05
CHD1O14646 ZNF114-206ENST00000600687 1742 ntAPPRIS P1 TSL 5 BASIC27.82■■■□□ 2.04
CHD1O14646 ERCC2-203ENST00000391944 2334 ntTSL 1 (best) BASIC27.82■■■□□ 2.04
CHD1O14646 MMD2-201ENST00000401401 2335 ntAPPRIS P1 TSL 1 (best) BASIC27.82■■■□□ 2.04
CHD1O14646 SZT2-AS1-201ENST00000396885 699 ntTSL 3 BASIC27.82■■■□□ 2.04
CHD1O14646 MALAT1-211ENST00000617791 394 ntTSL 5 BASIC27.82■■■□□ 2.04
CHD1O14646 TMEM147-AS1-203ENST00000589137 1627 ntTSL 1 (best) BASIC27.82■■■□□ 2.04
CHD1O14646 SPOCK3-215ENST00000510741 1963 ntAPPRIS ALT2 TSL 5 BASIC27.82■■■□□ 2.04
CHD1O14646 BEND5-201ENST00000371833 1716 ntAPPRIS P1 TSL 1 (best) BASIC27.82■■■□□ 2.04
CHD1O14646 EBF1-202ENST00000380654 2345 ntTSL 1 (best) BASIC27.82■■■□□ 2.04
CHD1O14646 NFKBIA-201ENST00000216797 1558 ntAPPRIS P1 TSL 1 (best) BASIC27.82■■■□□ 2.04
CHD1O14646 NOX4-215ENST00000534731 2156 ntTSL 1 (best) BASIC27.82■■■□□ 2.04
CHD1O14646 SPNS1-204ENST00000352260 1948 ntTSL 1 (best) BASIC27.82■■■□□ 2.04
CHD1O14646 RNH1-201ENST00000354420 1894 ntAPPRIS P1 TSL 5 BASIC27.81■■■□□ 2.04
CHD1O14646 SNHG17-203ENST00000417578 880 ntTSL 2 BASIC27.81■■■□□ 2.04
CHD1O14646 AL121753.1-201ENST00000444717 529 ntAPPRIS P1 TSL 3 BASIC27.81■■■□□ 2.04
CHD1O14646 AC120498.3-201ENST00000568884 542 ntTSL 4 BASIC27.81■■■□□ 2.04
CHD1O14646 DMRT3-201ENST00000190165 2183 ntAPPRIS P1 TSL 1 (best) BASIC27.81■■■□□ 2.04
CHD1O14646 AP3S2-216ENST00000617003 1561 ntBASIC27.81■■■□□ 2.04
CHD1O14646 PODNL1-201ENST00000254320 1859 ntTSL 2 BASIC27.81■■■□□ 2.04
Retrieved 100 of 98,524 protein–RNA pairs in 45.8 ms