Protein–RNA interactions for Protein: O00483

NDUFA4, Cytochrome c oxidase subunit NDUFA4, humanhuman

Predictions only

Length 81 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NDUFA4O00483 TCIRG1-201ENST00000265686 2677 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
NDUFA4O00483 SLC29A2-206ENST00000546034 2509 ntAPPRIS P1 TSL 5 BASIC13.42□□□□□ -0.26
NDUFA4O00483 MAP3K6-202ENST00000374040 4309 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
NDUFA4O00483 SORT1-201ENST00000256637 7028 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
NDUFA4O00483 CLDN6-202ENST00000396925 1739 ntAPPRIS P1 TSL 5 BASIC13.42□□□□□ -0.26
NDUFA4O00483 C8orf46-215ENST00000522977 1347 ntTSL 2 BASIC13.41□□□□□ -0.26
NDUFA4O00483 EPHA10-201ENST00000319637 2050 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
NDUFA4O00483 LGMN-201ENST00000334869 2055 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
NDUFA4O00483 EIF3B-201ENST00000360876 3055 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
NDUFA4O00483 NFATC1-210ENST00000587635 2195 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
NDUFA4O00483 ADAD1-203ENST00000388725 1918 ntTSL 2 BASIC13.41□□□□□ -0.26
NDUFA4O00483 COQ9-201ENST00000262507 1677 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
NDUFA4O00483 NODAL-201ENST00000287139 1665 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
NDUFA4O00483 APBB1-207ENST00000529519 1442 ntTSL 5 BASIC13.41□□□□□ -0.26
NDUFA4O00483 MAPKAPK3-201ENST00000357955 2500 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
NDUFA4O00483 NDFIP1-201ENST00000253814 3851 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
NDUFA4O00483 TNIP1-211ENST00000521591 2274 ntAPPRIS P3 TSL 1 (best) BASIC13.41□□□□□ -0.26
NDUFA4O00483 SYNGR2-206ENST00000589711 2041 ntTSL 5 BASIC13.41□□□□□ -0.26
NDUFA4O00483 TTC29-201ENST00000325106 1785 ntAPPRIS P3 TSL 1 (best) BASIC13.41□□□□□ -0.26
NDUFA4O00483 POC1A-203ENST00000474012 1760 ntAPPRIS ALT2 TSL 2 BASIC13.41□□□□□ -0.26
NDUFA4O00483 TTC29-205ENST00000504425 1777 ntAPPRIS ALT2 TSL 5 BASIC13.41□□□□□ -0.26
NDUFA4O00483 LINC00905-202ENST00000588117 1768 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
NDUFA4O00483 MCU-201ENST00000357157 2874 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
NDUFA4O00483 HHIPL1-201ENST00000330710 7390 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
NDUFA4O00483 CYP2W1-202ENST00000340150 2361 ntTSL 2 BASIC13.41□□□□□ -0.26
NDUFA4O00483 PTPN6-204ENST00000456013 2389 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
NDUFA4O00483 PRMT2-201ENST00000291705 1011 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
NDUFA4O00483 FAM86B2-202ENST00000309608 806 ntTSL 3 BASIC13.41□□□□□ -0.26
NDUFA4O00483 UBE2C-204ENST00000356455 850 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
NDUFA4O00483 INSL3-202ENST00000379695 899 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
NDUFA4O00483 CXCL12-204ENST00000395793 665 ntTSL 5 BASIC13.41□□□□□ -0.26
NDUFA4O00483 KLF4P1-201ENST00000412782 1185 ntBASIC13.41□□□□□ -0.26
NDUFA4O00483 TMEM213-202ENST00000413208 480 ntAPPRIS ALT2 TSL 3 BASIC13.41□□□□□ -0.26
NDUFA4O00483 TP53TG1-202ENST00000416560 710 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
NDUFA4O00483 IFT27-205ENST00000433985 1095 ntAPPRIS ALT1 TSL 1 (best) BASIC13.41□□□□□ -0.26
NDUFA4O00483 KRT16P4-201ENST00000453883 522 ntBASIC13.41□□□□□ -0.26
NDUFA4O00483 EIF5A2-203ENST00000474096 570 ntTSL 4 BASIC13.41□□□□□ -0.26
NDUFA4O00483 BET1L-206ENST00000486280 665 ntTSL 3 BASIC13.41□□□□□ -0.26
NDUFA4O00483 AL157871.1-202ENST00000556458 478 ntTSL 5 BASIC13.41□□□□□ -0.26
NDUFA4O00483 AC021739.5-201ENST00000558637 494 ntTSL 3 BASIC13.41□□□□□ -0.26
NDUFA4O00483 GZMM-202ENST00000592501 941 ntTSL 3 BASIC13.41□□□□□ -0.26
NDUFA4O00483 FUT6-212ENST00000592563 1095 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
NDUFA4O00483 TMEM114-203ENST00000620492 945 ntAPPRIS P1 TSL 2 BASIC13.41□□□□□ -0.26
NDUFA4O00483 AC073592.5-201ENST00000624854 528 ntBASIC13.41□□□□□ -0.26
NDUFA4O00483 AL513523.2-201ENST00000633218 660 ntTSL 3 BASIC13.41□□□□□ -0.26
NDUFA4O00483 ARHGEF5-202ENST00000471847 1862 ntAPPRIS ALT2 TSL 1 (best) BASIC13.41□□□□□ -0.26
NDUFA4O00483 AC125494.1-203ENST00000396799 1622 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
NDUFA4O00483 HMGXB3-201ENST00000502717 4974 ntAPPRIS P2 TSL 1 (best) BASIC13.41□□□□□ -0.26
NDUFA4O00483 RNF34-201ENST00000361234 2066 ntAPPRIS ALT1 TSL 1 (best) BASIC13.41□□□□□ -0.26
NDUFA4O00483 AL645608.8-201ENST00000606034 2086 ntBASIC13.41□□□□□ -0.26
NDUFA4O00483 COBL-201ENST00000265136 5291 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
NDUFA4O00483 PPP3CA-203ENST00000394854 4685 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
NDUFA4O00483 AL355987.1-201ENST00000435202 2420 ntAPPRIS P1 TSL 2 BASIC13.41□□□□□ -0.26
NDUFA4O00483 IDH3G-201ENST00000217901 1485 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
NDUFA4O00483 DNAJC28-203ENST00000402202 1480 ntAPPRIS P1 TSL 5 BASIC13.41□□□□□ -0.26
NDUFA4O00483 BPIFB4-201ENST00000375483 2159 ntAPPRIS P1 TSL 5 BASIC13.41□□□□□ -0.26
NDUFA4O00483 PHKA1-205ENST00000541944 5944 ntAPPRIS ALT1 TSL 1 (best) BASIC13.41□□□□□ -0.26
NDUFA4O00483 CXorf67-201ENST00000342995 1929 ntAPPRIS P1 BASIC13.41□□□□□ -0.26
NDUFA4O00483 PAX7-201ENST00000375375 2260 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
NDUFA4O00483 A4GALT-202ENST00000381278 1935 ntAPPRIS P1 TSL 5 BASIC13.41□□□□□ -0.26
NDUFA4O00483 TRNT1-205ENST00000402675 1935 ntTSL 2 BASIC13.41□□□□□ -0.26
NDUFA4O00483 YIPF2-204ENST00000586748 1550 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
NDUFA4O00483 NSD3-201ENST00000316985 3995 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
NDUFA4O00483 TCP11L2-203ENST00000547153 1788 ntTSL 2 BASIC13.4□□□□□ -0.26
NDUFA4O00483 MUM1-216ENST00000627377 2235 ntAPPRIS ALT2 TSL 5 BASIC13.4□□□□□ -0.26
NDUFA4O00483 CASZ1-202ENST00000377022 7936 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
NDUFA4O00483 LAT-203ENST00000395456 1616 ntAPPRIS ALT2 TSL 1 (best) BASIC13.4□□□□□ -0.26
NDUFA4O00483 ADAMTS16-201ENST00000274181 4979 ntAPPRIS P1 TSL 2 BASIC13.4□□□□□ -0.26
NDUFA4O00483 TLCD2-201ENST00000330676 5971 ntAPPRIS P1 TSL 2 BASIC13.4□□□□□ -0.26
NDUFA4O00483 TFAP2E-201ENST00000373235 2189 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
NDUFA4O00483 USH1C-205ENST00000527020 2159 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
NDUFA4O00483 PDE9A-203ENST00000335440 1728 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
NDUFA4O00483 TRIM17-204ENST00000366698 1748 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
NDUFA4O00483 TCEAL3-201ENST00000243286 1124 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
NDUFA4O00483 TMEM171-201ENST00000287773 1247 ntAPPRIS ALT1 TSL 5 BASIC13.4□□□□□ -0.26
NDUFA4O00483 FUOM-202ENST00000368551 628 ntTSL 3 BASIC13.4□□□□□ -0.26
NDUFA4O00483 RASGRP2-208ENST00000394428 444 ntTSL 2 BASIC13.4□□□□□ -0.26
NDUFA4O00483 GNB1L-203ENST00000405009 1076 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
NDUFA4O00483 NUS1P2-201ENST00000417358 873 ntBASIC13.4□□□□□ -0.26
NDUFA4O00483 AKR7L-201ENST00000420396 1240 ntAPPRIS ALT2 TSL 5 BASIC13.4□□□□□ -0.26
NDUFA4O00483 HCG4P8-203ENST00000443049 980 ntBASIC13.4□□□□□ -0.26
NDUFA4O00483 NUS1P1-201ENST00000446295 882 ntBASIC13.4□□□□□ -0.26
NDUFA4O00483 PHGR1-201ENST00000448599 436 ntAPPRIS P1 TSL 5 BASIC13.4□□□□□ -0.26
NDUFA4O00483 FICD-205ENST00000552758 603 ntTSL 2 BASIC13.4□□□□□ -0.26
NDUFA4O00483 ABCD4-228ENST00000557588 763 ntTSL 3 BASIC13.4□□□□□ -0.26
NDUFA4O00483 CHRNB1-207ENST00000575379 1095 ntTSL 2 BASIC13.4□□□□□ -0.26
NDUFA4O00483 C1QTNF1-205ENST00000578229 1294 ntTSL 4 BASIC13.4□□□□□ -0.26
NDUFA4O00483 MIR3652-201ENST00000579335 131 ntBASIC13.4□□□□□ -0.26
NDUFA4O00483 C19orf25-210ENST00000591027 574 ntTSL 4 BASIC13.4□□□□□ -0.26
NDUFA4O00483 CCDC61-202ENST00000594087 1017 ntAPPRIS ALT2 TSL 5 BASIC13.4□□□□□ -0.26
NDUFA4O00483 RABEP2-202ENST00000358201 2821 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
NDUFA4O00483 SUSD4-208ENST00000494793 1833 ntTSL 5 BASIC13.4□□□□□ -0.26
NDUFA4O00483 SAMD3-202ENST00000368134 2377 ntAPPRIS P1 TSL 2 BASIC13.4□□□□□ -0.26
NDUFA4O00483 IRF5-210ENST00000477535 1374 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
NDUFA4O00483 CARNS1-202ENST00000445895 3971 ntAPPRIS P1 TSL 5 BASIC13.4□□□□□ -0.26
NDUFA4O00483 AC009336.1-201ENST00000608941 1553 ntBASIC13.4□□□□□ -0.26
NDUFA4O00483 U2AF2-201ENST00000308924 1698 ntAPPRIS P3 TSL 1 (best) BASIC13.4□□□□□ -0.26
NDUFA4O00483 MCM9-201ENST00000316068 2442 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
NDUFA4O00483 GCSH-209ENST00000639689 2412 ntTSL 5 BASIC13.4□□□□□ -0.26
NDUFA4O00483 RUVBL1-201ENST00000322623 1761 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Retrieved 100 of 98,524 protein–RNA pairs in 38.1 ms