Protein–RNA interactions for Protein: A7E2U8

C4orf47, UPF0602 protein C4orf47, humanhuman

Predictions only

Length 309 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
C4orf47A7E2U8 NAF1-202ENST00000422287 1604 ntAPPRIS ALT2 TSL 1 (best) BASIC17.03■□□□□ 0.32
C4orf47A7E2U8 TNFRSF14-AS1-205ENST00000449660 1629 ntTSL 2 BASIC17.03■□□□□ 0.32
C4orf47A7E2U8 PLXNB2-214ENST00000614805 1387 ntTSL 5 BASIC17.03■□□□□ 0.32
C4orf47A7E2U8 NUP50-AS1-201ENST00000426282 2076 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
C4orf47A7E2U8 KCNH1-210ENST00000640044 1818 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
C4orf47A7E2U8 GNRHR2-201ENST00000312753 1599 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
C4orf47A7E2U8 GPER1-204ENST00000401670 1542 ntAPPRIS P1 TSL 2 BASIC17.03■□□□□ 0.32
C4orf47A7E2U8 ARHGEF18-202ENST00000359920 5733 ntAPPRIS ALT2 TSL 2 BASIC17.03■□□□□ 0.32
C4orf47A7E2U8 AC027097.1-202ENST00000592201 1954 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
C4orf47A7E2U8 TMEM41A-201ENST00000296254 1060 ntTSL 2 BASIC17.03■□□□□ 0.32
C4orf47A7E2U8 LINC00313-201ENST00000332440 579 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
C4orf47A7E2U8 XAGE1A-203ENST00000375602 614 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
C4orf47A7E2U8 XAGE1B-203ENST00000375616 614 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
C4orf47A7E2U8 FBXO44-205ENST00000376768 959 ntTSL 2 BASIC17.03■□□□□ 0.32
C4orf47A7E2U8 RBM43-202ENST00000409092 579 ntAPPRIS ALT2 TSL 2 BASIC17.03■□□□□ 0.32
C4orf47A7E2U8 BASP1P1-201ENST00000430708 665 ntBASIC17.03■□□□□ 0.32
C4orf47A7E2U8 AC002472.2-201ENST00000442739 958 ntBASIC17.03■□□□□ 0.32
C4orf47A7E2U8 LINC01812-201ENST00000457448 725 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
C4orf47A7E2U8 OARD1-208ENST00000469104 704 ntTSL 2 BASIC17.03■□□□□ 0.32
C4orf47A7E2U8 SPINK2-203ENST00000506738 763 ntAPPRIS ALT2 TSL 2 BASIC17.03■□□□□ 0.32
C4orf47A7E2U8 AC103736.1-203ENST00000524565 872 ntTSL 3 BASIC17.03■□□□□ 0.32
C4orf47A7E2U8 IGLL5-201ENST00000526893 1050 ntAPPRIS P2 TSL 1 (best) BASIC17.03■□□□□ 0.32
C4orf47A7E2U8 IGLL5-202ENST00000531372 882 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
C4orf47A7E2U8 ZNF710-AS1-201ENST00000558334 1168 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
C4orf47A7E2U8 PPP1R14A-203ENST00000587515 607 ntTSL 2 BASIC17.03■□□□□ 0.32
C4orf47A7E2U8 AC015911.4-201ENST00000588022 1070 ntBASIC17.03■□□□□ 0.32
C4orf47A7E2U8 SLC9A3-AS1-204ENST00000606288 791 ntTSL 2 BASIC17.03■□□□□ 0.32
C4orf47A7E2U8 OARD1-216ENST00000628419 1188 ntTSL 5 BASIC17.03■□□□□ 0.32
C4orf47A7E2U8 PNPLA2-201ENST00000336615 2428 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
C4orf47A7E2U8 SLC2A11-204ENST00000398356 2388 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
C4orf47A7E2U8 CNOT11-201ENST00000289382 2599 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
C4orf47A7E2U8 TMEM37-201ENST00000306406 1688 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
C4orf47A7E2U8 B3GNT2-201ENST00000301998 2763 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
C4orf47A7E2U8 AC005920.1-201ENST00000501718 2054 ntTSL 2 BASIC17.03■□□□□ 0.32
C4orf47A7E2U8 ADAMTS8-201ENST00000257359 4010 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
C4orf47A7E2U8 ADORA1-202ENST00000337894 2919 ntAPPRIS P1 TSL 2 BASIC17.03■□□□□ 0.32
C4orf47A7E2U8 PCDHA2-203ENST00000526136 5254 ntAPPRIS P2 TSL 1 (best) BASIC17.03■□□□□ 0.32
C4orf47A7E2U8 NPNT-203ENST00000427316 2481 ntAPPRIS ALT2 TSL 2 BASIC17.03■□□□□ 0.32
C4orf47A7E2U8 WWOX-214ENST00000566780 2482 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
C4orf47A7E2U8 NEUROD2-201ENST00000302584 2041 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
C4orf47A7E2U8 SNX1-213ENST00000561026 1374 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
C4orf47A7E2U8 CD55-206ENST00000391921 2433 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
C4orf47A7E2U8 AC006116.8-202ENST00000587620 1550 ntBASIC17.02■□□□□ 0.32
C4orf47A7E2U8 FDXR-217ENST00000582944 1766 ntTSL 2 BASIC17.02■□□□□ 0.32
C4orf47A7E2U8 SLC25A43-201ENST00000217909 2783 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
C4orf47A7E2U8 KCNQ2-205ENST00000360480 2775 ntAPPRIS ALT2 TSL 5 BASIC17.02■□□□□ 0.32
C4orf47A7E2U8 LYPD5-203ENST00000594013 1519 ntAPPRIS P3 TSL 2 BASIC17.02■□□□□ 0.32
C4orf47A7E2U8 AC006974.1-201ENST00000637928 1501 ntTSL 5 BASIC17.02■□□□□ 0.32
C4orf47A7E2U8 CHD1L-204ENST00000431239 2907 ntTSL 5 BASIC17.02■□□□□ 0.32
C4orf47A7E2U8 CASD1-201ENST00000297273 3942 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
C4orf47A7E2U8 GSEC-201ENST00000626810 2289 ntTSL 2 BASIC17.02■□□□□ 0.32
C4orf47A7E2U8 GRM2-204ENST00000442933 2064 ntTSL 5 BASIC17.02■□□□□ 0.32
C4orf47A7E2U8 ZNF787-202ENST00000587279 1657 ntTSL 2 BASIC17.02■□□□□ 0.32
C4orf47A7E2U8 RPS27A-201ENST00000272317 1071 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
C4orf47A7E2U8 S100A14-204ENST00000368702 1218 ntAPPRIS P1 TSL 3 BASIC17.02■□□□□ 0.32
C4orf47A7E2U8 NABP1-203ENST00000409510 843 ntTSL 5 BASIC17.02■□□□□ 0.32
C4orf47A7E2U8 AL627223.1-201ENST00000416693 442 ntBASIC17.02■□□□□ 0.32
C4orf47A7E2U8 FXYD1-202ENST00000455515 594 ntAPPRIS P1 TSL 2 BASIC17.02■□□□□ 0.32
C4orf47A7E2U8 S100A14-206ENST00000476873 1025 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
C4orf47A7E2U8 GATB-205ENST00000508611 605 ntTSL 2 BASIC17.02■□□□□ 0.32
C4orf47A7E2U8 FBXO4-206ENST00000509134 1284 ntTSL 5 BASIC17.02■□□□□ 0.32
C4orf47A7E2U8 AC091053.1-201ENST00000529883 744 ntTSL 3 BASIC17.02■□□□□ 0.32
C4orf47A7E2U8 OR10S1-201ENST00000531945 1121 ntAPPRIS P2 BASIC17.02■□□□□ 0.32
C4orf47A7E2U8 AL442663.3-201ENST00000554737 1000 ntTSL 3 BASIC17.02■□□□□ 0.32
C4orf47A7E2U8 CIRBP-204ENST00000585630 870 ntAPPRIS P3 TSL 3 BASIC17.02■□□□□ 0.32
C4orf47A7E2U8 OR10S1-202ENST00000641123 1121 ntAPPRIS ALT2 BASIC17.02■□□□□ 0.32
C4orf47A7E2U8 PCDH1-201ENST00000287008 4793 ntAPPRIS P3 TSL 5 BASIC17.02■□□□□ 0.32
C4orf47A7E2U8 FAM91A1-201ENST00000334705 5511 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
C4orf47A7E2U8 CBX1-201ENST00000225603 2232 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
C4orf47A7E2U8 VAV1-204ENST00000596764 2775 ntTSL 2 BASIC17.02■□□□□ 0.31
C4orf47A7E2U8 SEMA3D-202ENST00000444867 1605 ntTSL 1 (best) BASIC17.02■□□□□ 0.31
C4orf47A7E2U8 AC092919.2-201ENST00000623631 1645 ntBASIC17.02■□□□□ 0.31
C4orf47A7E2U8 GRM5-201ENST00000305432 4475 ntAPPRIS P3 TSL 1 (best) BASIC17.02■□□□□ 0.31
C4orf47A7E2U8 DEF8-211ENST00000563795 1767 ntTSL 5 BASIC17.02■□□□□ 0.31
C4orf47A7E2U8 TAF6-211ENST00000453269 2464 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
C4orf47A7E2U8 MFSD11-219ENST00000593181 1922 ntTSL 1 (best) BASIC17.02■□□□□ 0.31
C4orf47A7E2U8 FOXI3-201ENST00000428390 2804 ntAPPRIS P1 TSL 3 BASIC17.02■□□□□ 0.31
C4orf47A7E2U8 ALDH5A1-201ENST00000348925 2266 ntAPPRIS P4 TSL 1 (best) BASIC17.01■□□□□ 0.31
C4orf47A7E2U8 PLEKHB2-204ENST00000409158 2277 ntTSL 2 BASIC17.01■□□□□ 0.31
C4orf47A7E2U8 FAM110A-203ENST00000381939 1737 ntAPPRIS P1 TSL 3 BASIC17.01■□□□□ 0.31
C4orf47A7E2U8 SERPINE2-206ENST00000447280 1716 ntTSL 2 BASIC17.01■□□□□ 0.31
C4orf47A7E2U8 PI4KAP1-204ENST00000612579 1703 ntBASIC17.01■□□□□ 0.31
C4orf47A7E2U8 FAM72B-207ENST00000619376 1659 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
C4orf47A7E2U8 NKIRAS2-207ENST00000449471 1461 ntTSL 2 BASIC17.01■□□□□ 0.31
C4orf47A7E2U8 TIMM13-201ENST00000215570 1973 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
C4orf47A7E2U8 NSDHL-203ENST00000440023 1630 ntAPPRIS P2 TSL 5 BASIC17.01■□□□□ 0.31
C4orf47A7E2U8 MBD3-201ENST00000156825 5518 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
C4orf47A7E2U8 C10orf35-201ENST00000373279 1065 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
C4orf47A7E2U8 AC055876.3-201ENST00000431496 288 ntBASIC17.01■□□□□ 0.31
C4orf47A7E2U8 TSPY16P-201ENST00000449843 468 ntBASIC17.01■□□□□ 0.31
C4orf47A7E2U8 AC018730.1-201ENST00000454183 327 ntTSL 3 BASIC17.01■□□□□ 0.31
C4orf47A7E2U8 SERF1A-207ENST00000512649 846 ntTSL 2 BASIC17.01■□□□□ 0.31
C4orf47A7E2U8 AC106897.1-201ENST00000512874 394 ntTSL 2 BASIC17.01■□□□□ 0.31
C4orf47A7E2U8 AC112191.1-201ENST00000523689 701 ntBASIC17.01■□□□□ 0.31
C4orf47A7E2U8 VPS29-207ENST00000549970 818 ntTSL 3 BASIC17.01■□□□□ 0.31
C4orf47A7E2U8 CYB561-216ENST00000582297 897 ntTSL 3 BASIC17.01■□□□□ 0.31
C4orf47A7E2U8 RN7SL204P-201ENST00000582831 262 ntBASIC17.01■□□□□ 0.31
C4orf47A7E2U8 HDDC2-203ENST00000608284 538 ntTSL 3 BASIC17.01■□□□□ 0.31
C4orf47A7E2U8 AC138649.4-201ENST00000612222 287 ntBASIC17.01■□□□□ 0.31
C4orf47A7E2U8 WNT1-202ENST00000613114 1278 ntTSL 5 BASIC17.01■□□□□ 0.31
Retrieved 100 of 98,524 protein–RNA pairs in 41.6 ms