Protein–RNA interactions for Protein: A0A0B4J2F2

LOC102724428, SNF1-like kinase, isoform CRA_a, humanhuman

Predictions only

Length 783 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LOC102724428A0A0B4J2F2 LRCH3-207ENST00000441090 2034 ntTSL 2 BASIC22.04■■□□□ 1.12
LOC102724428A0A0B4J2F2 TXNRD3-202ENST00000523403 2351 ntAPPRIS ALT2 TSL 2 BASIC22.04■■□□□ 1.12
LOC102724428A0A0B4J2F2 BAGE2-202ENST00000474011 1482 ntTSL 2 BASIC22.04■■□□□ 1.12
LOC102724428A0A0B4J2F2 GGT2-202ENST00000405188 1845 ntTSL 5 BASIC22.04■■□□□ 1.12
LOC102724428A0A0B4J2F2 MTCL1-201ENST00000306329 5718 ntAPPRIS ALT2 TSL 5 BASIC22.04■■□□□ 1.12
LOC102724428A0A0B4J2F2 ISYNA1-202ENST00000457269 1703 ntTSL 2 BASIC22.04■■□□□ 1.12
LOC102724428A0A0B4J2F2 CIZ1-226ENST00000629610 2855 ntAPPRIS ALT2 TSL 2 BASIC22.04■■□□□ 1.12
LOC102724428A0A0B4J2F2 CABP2-201ENST00000294288 925 ntTSL 1 (best) BASIC22.04■■□□□ 1.12
LOC102724428A0A0B4J2F2 CENPM-205ENST00000404067 905 ntTSL 3 BASIC22.04■■□□□ 1.12
LOC102724428A0A0B4J2F2 SPCS2P4-201ENST00000436160 681 ntBASIC22.04■■□□□ 1.12
LOC102724428A0A0B4J2F2 OARD1-208ENST00000469104 704 ntTSL 2 BASIC22.04■■□□□ 1.12
LOC102724428A0A0B4J2F2 AC099482.1-201ENST00000563471 481 ntTSL 2 BASIC22.04■■□□□ 1.12
LOC102724428A0A0B4J2F2 CD7-202ENST00000578509 925 ntTSL 3 BASIC22.04■■□□□ 1.12
LOC102724428A0A0B4J2F2 ZNF667-AS1-204ENST00000588158 921 ntTSL 3 BASIC22.04■■□□□ 1.12
LOC102724428A0A0B4J2F2 GMFG-207ENST00000598034 1028 ntAPPRIS ALT1 TSL 1 (best) BASIC22.04■■□□□ 1.12
LOC102724428A0A0B4J2F2 OARD1-216ENST00000628419 1188 ntTSL 5 BASIC22.04■■□□□ 1.12
LOC102724428A0A0B4J2F2 FOXP1-210ENST00000484350 1996 ntTSL 2 BASIC22.04■■□□□ 1.12
LOC102724428A0A0B4J2F2 PIANP-201ENST00000320591 2323 ntAPPRIS P3 TSL 1 (best) BASIC22.04■■□□□ 1.12
LOC102724428A0A0B4J2F2 ARHGAP5-203ENST00000396582 5786 ntTSL 1 (best) BASIC22.04■■□□□ 1.12
LOC102724428A0A0B4J2F2 HCN1-202ENST00000634658 4738 ntTSL 3 BASIC22.04■■□□□ 1.12
LOC102724428A0A0B4J2F2 PLEKHB2-204ENST00000409158 2277 ntTSL 2 BASIC22.04■■□□□ 1.12
LOC102724428A0A0B4J2F2 TEX264-202ENST00000395057 1555 ntAPPRIS P3 TSL 1 (best) BASIC22.04■■□□□ 1.12
LOC102724428A0A0B4J2F2 USP36-203ENST00000542802 6063 ntAPPRIS P2 TSL 1 (best) BASIC22.03■■□□□ 1.12
LOC102724428A0A0B4J2F2 ARMC9-201ENST00000349938 2300 ntAPPRIS P1 TSL 1 (best) BASIC22.03■■□□□ 1.12
LOC102724428A0A0B4J2F2 FAM57B-201ENST00000279389 1481 ntTSL 1 (best) BASIC22.03■■□□□ 1.12
LOC102724428A0A0B4J2F2 FDXR-203ENST00000420580 1705 ntTSL 2 BASIC22.03■■□□□ 1.12
LOC102724428A0A0B4J2F2 RETREG2-203ENST00000430297 4618 ntAPPRIS P1 TSL 1 (best) BASIC22.03■■□□□ 1.12
LOC102724428A0A0B4J2F2 ARRDC2-201ENST00000222250 2503 ntAPPRIS P1 TSL 1 (best) BASIC22.03■■□□□ 1.12
LOC102724428A0A0B4J2F2 RHOT2-201ENST00000315082 2539 ntAPPRIS P1 TSL 1 (best) BASIC22.03■■□□□ 1.12
LOC102724428A0A0B4J2F2 TREX2-201ENST00000330912 2262 ntAPPRIS P1 TSL 1 (best) BASIC22.03■■□□□ 1.12
LOC102724428A0A0B4J2F2 PDHX-203ENST00000448838 2653 ntTSL 5 BASIC22.03■■□□□ 1.12
LOC102724428A0A0B4J2F2 CLPP-201ENST00000245816 1155 ntAPPRIS P1 TSL 1 (best) BASIC22.03■■□□□ 1.12
LOC102724428A0A0B4J2F2 MRNIP-201ENST00000292586 1238 ntAPPRIS P4 TSL 1 (best) BASIC22.03■■□□□ 1.12
LOC102724428A0A0B4J2F2 EIF5A-201ENST00000336452 1256 ntTSL 1 (best) BASIC22.03■■□□□ 1.12
LOC102724428A0A0B4J2F2 ZSCAN2-205ENST00000379358 906 ntTSL 1 (best) BASIC22.03■■□□□ 1.12
LOC102724428A0A0B4J2F2 BX276092.7-202ENST00000422194 696 ntTSL 3 BASIC22.03■■□□□ 1.12
LOC102724428A0A0B4J2F2 RBPMS2P1-201ENST00000437762 623 ntBASIC22.03■■□□□ 1.12
LOC102724428A0A0B4J2F2 TSPY16P-201ENST00000449843 468 ntBASIC22.03■■□□□ 1.12
LOC102724428A0A0B4J2F2 TERF1P3-201ENST00000505638 1227 ntBASIC22.03■■□□□ 1.12
LOC102724428A0A0B4J2F2 CCDC74BP1-201ENST00000508880 1123 ntBASIC22.03■■□□□ 1.12
LOC102724428A0A0B4J2F2 PUDP-206ENST00000540122 825 ntTSL 2 BASIC22.03■■□□□ 1.12
LOC102724428A0A0B4J2F2 MIR4515-201ENST00000584082 81 ntBASIC22.03■■□□□ 1.12
LOC102724428A0A0B4J2F2 AC243571.2-201ENST00000615265 628 ntTSL 3 BASIC22.03■■□□□ 1.12
LOC102724428A0A0B4J2F2 INVS-203ENST00000374921 1654 ntTSL 1 (best) BASIC22.03■■□□□ 1.12
LOC102724428A0A0B4J2F2 HYAL3-207ENST00000621157 1696 ntAPPRIS P1 TSL 5 BASIC22.03■■□□□ 1.12
LOC102724428A0A0B4J2F2 NPNT-203ENST00000427316 2481 ntAPPRIS ALT2 TSL 2 BASIC22.03■■□□□ 1.12
LOC102724428A0A0B4J2F2 RAB37-208ENST00000402449 1560 ntAPPRIS P3 TSL 2 BASIC22.03■■□□□ 1.12
LOC102724428A0A0B4J2F2 COX20-203ENST00000411948 2631 ntAPPRIS P1 TSL 1 (best) BASIC22.03■■□□□ 1.12
LOC102724428A0A0B4J2F2 ZDHHC19-201ENST00000296326 1306 ntAPPRIS P1 TSL 5 BASIC22.03■■□□□ 1.12
LOC102724428A0A0B4J2F2 TMEM259-209ENST00000592590 2509 ntTSL 5 BASIC22.03■■□□□ 1.12
LOC102724428A0A0B4J2F2 ZBED3-201ENST00000255198 6172 ntAPPRIS P2 TSL 1 (best) BASIC22.03■■□□□ 1.12
LOC102724428A0A0B4J2F2 BCR-202ENST00000359540 4708 ntTSL 1 (best) BASIC22.02■■□□□ 1.12
LOC102724428A0A0B4J2F2 PRPF31-202ENST00000391755 1767 ntTSL 5 BASIC22.02■■□□□ 1.12
LOC102724428A0A0B4J2F2 MOCS2-202ENST00000396954 1785 ntAPPRIS P1 TSL 1 (best) BASIC22.02■■□□□ 1.12
LOC102724428A0A0B4J2F2 NR1H3-202ENST00000405576 1352 ntTSL 5 BASIC22.02■■□□□ 1.12
LOC102724428A0A0B4J2F2 LRRC1-202ENST00000370888 3180 ntAPPRIS P1 TSL 1 (best) BASIC22.02■■□□□ 1.12
LOC102724428A0A0B4J2F2 NRSN2-202ENST00000382291 2088 ntAPPRIS P1 TSL 2 BASIC22.02■■□□□ 1.12
LOC102724428A0A0B4J2F2 CXXC1-212ENST00000589940 2242 ntTSL 1 (best) BASIC22.02■■□□□ 1.12
LOC102724428A0A0B4J2F2 ZNF281-202ENST00000367352 2933 ntAPPRIS ALT2 TSL 2 BASIC22.02■■□□□ 1.12
LOC102724428A0A0B4J2F2 SCYL1-202ENST00000279270 1659 ntTSL 5 BASIC22.02■■□□□ 1.12
LOC102724428A0A0B4J2F2 MIOX-202ENST00000395732 1658 ntTSL 1 (best) BASIC22.02■■□□□ 1.12
LOC102724428A0A0B4J2F2 SHISA3-201ENST00000319234 1971 ntAPPRIS P1 TSL 1 (best) BASIC22.02■■□□□ 1.12
LOC102724428A0A0B4J2F2 MRPL53-201ENST00000258105 1162 ntAPPRIS P1 TSL 1 (best) BASIC22.02■■□□□ 1.12
LOC102724428A0A0B4J2F2 ZNF524-201ENST00000301073 1102 ntAPPRIS P1 TSL 1 (best) BASIC22.02■■□□□ 1.12
LOC102724428A0A0B4J2F2 WRB-204ENST00000398753 699 ntTSL 3 BASIC22.02■■□□□ 1.12
LOC102724428A0A0B4J2F2 AC107890.1-201ENST00000422478 521 ntBASIC22.02■■□□□ 1.12
LOC102724428A0A0B4J2F2 AC016735.2-201ENST00000438736 569 ntTSL 4 BASIC22.02■■□□□ 1.12
LOC102724428A0A0B4J2F2 REEP2-206ENST00000506158 1021 ntTSL 2 BASIC22.02■■□□□ 1.12
LOC102724428A0A0B4J2F2 FAM177A1-207ENST00000554052 540 ntAPPRIS ALT2 TSL 2 BASIC22.02■■□□□ 1.12
LOC102724428A0A0B4J2F2 CERNA1-201ENST00000559779 908 ntTSL 3 BASIC22.02■■□□□ 1.12
LOC102724428A0A0B4J2F2 GNAO1-210ENST00000569295 930 ntTSL 2 BASIC22.02■■□□□ 1.12
LOC102724428A0A0B4J2F2 AC104985.1-201ENST00000587528 507 ntTSL 3 BASIC22.02■■□□□ 1.12
LOC102724428A0A0B4J2F2 AC141424.1-203ENST00000599026 887 ntTSL 5 BASIC22.02■■□□□ 1.12
LOC102724428A0A0B4J2F2 YTHDF3-AS1-201ENST00000603538 718 ntBASIC22.02■■□□□ 1.12
LOC102724428A0A0B4J2F2 LRRC42-201ENST00000319223 1727 ntAPPRIS P1 TSL 1 (best) BASIC22.02■■□□□ 1.12
LOC102724428A0A0B4J2F2 TMEM59L-205ENST00000600490 1717 ntAPPRIS P1 TSL 5 BASIC22.02■■□□□ 1.12
LOC102724428A0A0B4J2F2 TSKS-201ENST00000246801 1883 ntAPPRIS P2 TSL 1 (best) BASIC22.02■■□□□ 1.12
LOC102724428A0A0B4J2F2 HUNK-201ENST00000270112 7385 ntAPPRIS P1 TSL 1 (best) BASIC22.02■■□□□ 1.12
LOC102724428A0A0B4J2F2 HEXB-207ENST00000511181 2021 ntTSL 1 (best) BASIC22.02■■□□□ 1.12
LOC102724428A0A0B4J2F2 ZNF74-203ENST00000403682 2789 ntTSL 1 (best) BASIC22.02■■□□□ 1.12
LOC102724428A0A0B4J2F2 MAPK8IP1-201ENST00000241014 3050 ntAPPRIS P1 TSL 1 (best) BASIC22.02■■□□□ 1.12
LOC102724428A0A0B4J2F2 TRIM58-201ENST00000366481 3225 ntAPPRIS P1 TSL 1 (best) BASIC22.02■■□□□ 1.12
LOC102724428A0A0B4J2F2 AC063926.2-201ENST00000623766 1308 ntBASIC22.02■■□□□ 1.12
LOC102724428A0A0B4J2F2 HYAL3-202ENST00000359051 1635 ntTSL 5 BASIC22.02■■□□□ 1.11
LOC102724428A0A0B4J2F2 SCHIP1-205ENST00000482804 1799 ntTSL 5 BASIC22.02■■□□□ 1.11
LOC102724428A0A0B4J2F2 SLC2A8-202ENST00000373360 1937 ntTSL 1 (best) BASIC22.02■■□□□ 1.11
LOC102724428A0A0B4J2F2 DKK3-202ENST00000396505 2650 ntAPPRIS P1 TSL 1 (best) BASIC22.02■■□□□ 1.11
LOC102724428A0A0B4J2F2 CNEP1R1-203ENST00000458059 2965 ntTSL 1 (best) BASIC22.02■■□□□ 1.11
LOC102724428A0A0B4J2F2 NKX2-1-203ENST00000518149 2583 ntAPPRIS P1 TSL 5 BASIC22.01■■□□□ 1.11
LOC102724428A0A0B4J2F2 CCDC34-202ENST00000328697 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC22.01■■□□□ 1.11
LOC102724428A0A0B4J2F2 PSRC1-205ENST00000409138 1826 ntTSL 2 BASIC22.01■■□□□ 1.11
LOC102724428A0A0B4J2F2 DXO-203ENST00000375356 1533 ntAPPRIS P1 TSL 1 (best) BASIC22.01■■□□□ 1.11
LOC102724428A0A0B4J2F2 TUBA4A-202ENST00000392088 2499 ntTSL 2 BASIC22.01■■□□□ 1.11
LOC102724428A0A0B4J2F2 LRRC27-214ENST00000625755 1738 ntAPPRIS ALT2 TSL 1 (best) BASIC22.01■■□□□ 1.11
LOC102724428A0A0B4J2F2 SVOPL-204ENST00000436657 1420 ntTSL 1 (best) BASIC22.01■■□□□ 1.11
LOC102724428A0A0B4J2F2 INSM2-201ENST00000307169 3013 ntAPPRIS P1 BASIC22.01■■□□□ 1.11
LOC102724428A0A0B4J2F2 CKS1B-202ENST00000368436 820 ntTSL 2 BASIC22.01■■□□□ 1.11
LOC102724428A0A0B4J2F2 LRRC37A5P-201ENST00000374304 1103 ntTSL 1 (best) BASIC22.01■■□□□ 1.11
LOC102724428A0A0B4J2F2 NME1-NME2-202ENST00000393193 1021 ntAPPRIS P2 TSL 2 BASIC22.01■■□□□ 1.11
LOC102724428A0A0B4J2F2 METTL26-204ENST00000397665 558 ntTSL 2 BASIC22.01■■□□□ 1.11
Retrieved 100 of 98,524 protein–RNA pairs in 79.9 ms