Protein–RNA interactions for Protein: A0A096LP49

CCDC187, Coiled-coil domain-containing protein 187, humanhuman

Predictions only

Length 1,063 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC187A0A096LP49 AC010776.2-201ENST00000588946 1081 ntTSL 2 BASIC16.49■□□□□ 0.23
CCDC187A0A096LP49 RAMP2-205ENST00000589683 858 ntTSL 3 BASIC16.49■□□□□ 0.23
CCDC187A0A096LP49 MAGIX-204ENST00000614074 778 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
CCDC187A0A096LP49 PGLYRP1-201ENST00000008938 720 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
CCDC187A0A096LP49 SLC38A10-201ENST00000288439 2708 ntAPPRIS P3 TSL 1 (best) BASIC16.49■□□□□ 0.23
CCDC187A0A096LP49 AK3-202ENST00000381809 2736 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
CCDC187A0A096LP49 C12orf42-201ENST00000378113 1513 ntAPPRIS P2 TSL 5 BASIC16.49■□□□□ 0.23
CCDC187A0A096LP49 ZNF213-202ENST00000416391 2996 ntAPPRIS P1 TSL 5 BASIC16.49■□□□□ 0.23
CCDC187A0A096LP49 MYC-207ENST00000621592 2366 ntAPPRIS ALT1 TSL 1 (best) BASIC16.49■□□□□ 0.23
CCDC187A0A096LP49 SALRNA1-201ENST00000555871 2086 ntTSL 4 BASIC16.49■□□□□ 0.23
CCDC187A0A096LP49 OTUD1-201ENST00000376495 2933 ntAPPRIS P1 BASIC16.49■□□□□ 0.23
CCDC187A0A096LP49 FAM50B-201ENST00000380272 1628 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
CCDC187A0A096LP49 SQOR-201ENST00000260324 2003 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
CCDC187A0A096LP49 AL590787.1-201ENST00000568856 1315 ntBASIC16.48■□□□□ 0.23
CCDC187A0A096LP49 AC008969.1-203ENST00000313957 1897 ntTSL 2 BASIC16.48■□□□□ 0.23
CCDC187A0A096LP49 PP7080-201ENST00000342584 1876 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
CCDC187A0A096LP49 LLGL2-203ENST00000392550 3509 ntAPPRIS P2 TSL 1 (best) BASIC16.48■□□□□ 0.23
CCDC187A0A096LP49 SLC29A2-201ENST00000311161 2262 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
CCDC187A0A096LP49 IFRD2-204ENST00000436390 2275 ntAPPRIS P1 TSL 2 BASIC16.48■□□□□ 0.23
CCDC187A0A096LP49 SPIRE2-201ENST00000378247 3235 ntAPPRIS P2 TSL 1 (best) BASIC16.48■□□□□ 0.23
CCDC187A0A096LP49 KIF22-201ENST00000160827 2113 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
CCDC187A0A096LP49 SLC7A9-202ENST00000587772 1568 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
CCDC187A0A096LP49 ADARB1-201ENST00000348831 6882 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
CCDC187A0A096LP49 TNFRSF8-202ENST00000413146 2363 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
CCDC187A0A096LP49 AL139400.1-201ENST00000366220 510 ntBASIC16.48■□□□□ 0.23
CCDC187A0A096LP49 PRUNE2-202ENST00000376713 1069 ntTSL 5 BASIC16.48■□□□□ 0.23
CCDC187A0A096LP49 NABP1-203ENST00000409510 843 ntTSL 5 BASIC16.48■□□□□ 0.23
CCDC187A0A096LP49 AC004461.1-201ENST00000412461 403 ntBASIC16.48■□□□□ 0.23
CCDC187A0A096LP49 AL022341.1-201ENST00000455294 389 ntTSL 2 BASIC16.48■□□□□ 0.23
CCDC187A0A096LP49 PARD6G-203ENST00000470488 596 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
CCDC187A0A096LP49 SEC24B-AS1-203ENST00000505895 800 ntTSL 4 BASIC16.48■□□□□ 0.23
CCDC187A0A096LP49 LINC01485-205ENST00000523617 586 ntTSL 2 BASIC16.48■□□□□ 0.23
CCDC187A0A096LP49 CYB561-216ENST00000582297 897 ntTSL 3 BASIC16.48■□□□□ 0.23
CCDC187A0A096LP49 FSTL3-207ENST00000605925 748 ntTSL 4 BASIC16.48■□□□□ 0.23
CCDC187A0A096LP49 AC105339.1-204ENST00000636249 355 ntBASIC16.48■□□□□ 0.23
CCDC187A0A096LP49 GNAI2-204ENST00000440628 1663 ntTSL 5 BASIC16.48■□□□□ 0.23
CCDC187A0A096LP49 ZNF302-214ENST00000613363 2893 ntAPPRIS ALT2 TSL 4 BASIC16.48■□□□□ 0.23
CCDC187A0A096LP49 L1CAM-205ENST00000370060 5113 ntAPPRIS P4 TSL 5 BASIC16.48■□□□□ 0.23
CCDC187A0A096LP49 SSC5D-201ENST00000389623 4845 ntAPPRIS P3 TSL 1 (best) BASIC16.48■□□□□ 0.23
CCDC187A0A096LP49 TUBA4A-201ENST00000248437 2162 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
CCDC187A0A096LP49 PLEKHG5-207ENST00000400913 4698 ntAPPRIS P3 TSL 5 BASIC16.48■□□□□ 0.23
CCDC187A0A096LP49 EIPR1-201ENST00000382125 1766 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
CCDC187A0A096LP49 C14orf93-204ENST00000397377 1776 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
CCDC187A0A096LP49 VGLL4-211ENST00000430365 1377 ntAPPRIS P1 TSL 2 BASIC16.48■□□□□ 0.23
CCDC187A0A096LP49 TBC1D19-201ENST00000264866 2263 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
CCDC187A0A096LP49 ARHGAP9-202ENST00000393797 2912 ntAPPRIS ALT2 TSL 1 (best) BASIC16.48■□□□□ 0.23
CCDC187A0A096LP49 ZNF296-202ENST00000622376 1631 ntAPPRIS ALT2 TSL 1 (best) BASIC16.48■□□□□ 0.23
CCDC187A0A096LP49 IGFALS-202ENST00000415638 2136 ntTSL 2 BASIC16.48■□□□□ 0.23
CCDC187A0A096LP49 SREK1-216ENST00000612404 2128 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
CCDC187A0A096LP49 ZNF385B-204ENST00000410066 3288 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
CCDC187A0A096LP49 COX20-203ENST00000411948 2631 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
CCDC187A0A096LP49 SPDYE5-203ENST00000625065 1700 ntAPPRIS P2 TSL 5 BASIC16.48■□□□□ 0.23
CCDC187A0A096LP49 SNX1-208ENST00000559844 1971 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
CCDC187A0A096LP49 ZZZ3-201ENST00000370798 2468 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
CCDC187A0A096LP49 DOC2B-203ENST00000613549 6048 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
CCDC187A0A096LP49 SIT1-204ENST00000618781 1317 ntAPPRIS ALT2 TSL 5 BASIC16.47■□□□□ 0.23
CCDC187A0A096LP49 MTG1-201ENST00000317502 1560 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
CCDC187A0A096LP49 MAPK9-207ENST00000452135 4815 ntAPPRIS P5 TSL 5 BASIC16.47■□□□□ 0.23
CCDC187A0A096LP49 MARK2-201ENST00000350490 2903 ntAPPRIS ALT2 TSL 1 (best) BASIC16.47■□□□□ 0.23
CCDC187A0A096LP49 FAM131A-202ENST00000340957 2421 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
CCDC187A0A096LP49 FIP1L1-203ENST00000358575 2180 ntAPPRIS P4 TSL 2 BASIC16.47■□□□□ 0.23
CCDC187A0A096LP49 CEP78-201ENST00000277082 2542 ntAPPRIS ALT2 TSL 2 BASIC16.47■□□□□ 0.23
CCDC187A0A096LP49 GAB3-203ENST00000424127 2028 ntAPPRIS ALT2 TSL 1 (best) BASIC16.47■□□□□ 0.23
CCDC187A0A096LP49 H3F3C-201ENST00000340398 1057 ntAPPRIS P1 BASIC16.47■□□□□ 0.23
CCDC187A0A096LP49 HIST1H3D-201ENST00000356476 411 ntAPPRIS P1 BASIC16.47■□□□□ 0.23
CCDC187A0A096LP49 TCF20-203ENST00000404876 1058 ntTSL 3 BASIC16.47■□□□□ 0.23
CCDC187A0A096LP49 LINC00029-202ENST00000414668 1117 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
CCDC187A0A096LP49 C1orf226-202ENST00000426197 1049 ntAPPRIS P3 TSL 2 BASIC16.47■□□□□ 0.23
CCDC187A0A096LP49 FAM185BP-201ENST00000443595 716 ntBASIC16.47■□□□□ 0.23
CCDC187A0A096LP49 AC112191.1-201ENST00000523689 701 ntBASIC16.47■□□□□ 0.23
CCDC187A0A096LP49 BRF1-219ENST00000551787 824 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
CCDC187A0A096LP49 SPCS2P1-201ENST00000561636 679 ntBASIC16.47■□□□□ 0.23
CCDC187A0A096LP49 AC025678.2-201ENST00000562061 970 ntBASIC16.47■□□□□ 0.23
CCDC187A0A096LP49 OVCA2-201ENST00000572195 1122 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
CCDC187A0A096LP49 AC104971.3-201ENST00000589794 335 ntTSL 2 BASIC16.47■□□□□ 0.23
CCDC187A0A096LP49 ULK2-201ENST00000361658 3908 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
CCDC187A0A096LP49 HNRNPM-201ENST00000325495 2494 ntAPPRIS P4 TSL 1 (best) BASIC16.47■□□□□ 0.23
CCDC187A0A096LP49 TMEM79-203ENST00000405535 2201 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
CCDC187A0A096LP49 GRAMD2B-219ENST00000544396 2822 ntTSL 2 BASIC16.47■□□□□ 0.23
CCDC187A0A096LP49 RPH3A-203ENST00000543106 2581 ntAPPRIS ALT2 TSL 2 BASIC16.47■□□□□ 0.23
CCDC187A0A096LP49 WDR61-201ENST00000267973 1387 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
CCDC187A0A096LP49 CD1E-205ENST00000368160 1727 ntAPPRIS ALT2 TSL 1 (best) BASIC16.47■□□□□ 0.23
CCDC187A0A096LP49 CDH24-205ENST00000554034 2759 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
CCDC187A0A096LP49 ZBTB48-202ENST00000377674 2293 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
CCDC187A0A096LP49 CLASRP-203ENST00000391953 1941 ntTSL 2 BASIC16.47■□□□□ 0.23
CCDC187A0A096LP49 SAMD14-203ENST00000503131 1938 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
CCDC187A0A096LP49 HOXC11-201ENST00000243082 2039 ntTSL 3 BASIC16.46■□□□□ 0.23
CCDC187A0A096LP49 LRCH3-207ENST00000441090 2034 ntTSL 2 BASIC16.46■□□□□ 0.23
CCDC187A0A096LP49 ZNF211-204ENST00000347302 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC16.46■□□□□ 0.23
CCDC187A0A096LP49 TLX1-201ENST00000370196 2906 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
CCDC187A0A096LP49 PPP2R5A-201ENST00000261461 3128 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
CCDC187A0A096LP49 NKIRAS1-207ENST00000437230 1898 ntAPPRIS ALT1 TSL 5 BASIC16.46■□□□□ 0.23
CCDC187A0A096LP49 HSD17B6-203ENST00000554150 1547 ntAPPRIS P1 TSL 5 BASIC16.46■□□□□ 0.23
CCDC187A0A096LP49 LYPD5-203ENST00000594013 1519 ntAPPRIS P3 TSL 2 BASIC16.46■□□□□ 0.23
CCDC187A0A096LP49 PCOLCE-AS1-201ENST00000442166 2537 ntTSL 2 BASIC16.46■□□□□ 0.23
CCDC187A0A096LP49 PDE9A-209ENST00000398227 1606 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
CCDC187A0A096LP49 CDCA7L-203ENST00000406877 3066 ntAPPRIS P3 TSL 1 (best) BASIC16.46■□□□□ 0.23
CCDC187A0A096LP49 RNF167-205ENST00000571816 1728 ntAPPRIS P3 TSL 5 BASIC16.46■□□□□ 0.23
CCDC187A0A096LP49 IMPAD1-201ENST00000262644 7199 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
CCDC187A0A096LP49 FBXO41-204ENST00000520530 3293 ntAPPRIS P1 TSL 5 BASIC16.46■□□□□ 0.23
Retrieved 100 of 98,524 protein–RNA pairs in 34.2 ms