Protein–RNA interactions for Protein: Q9Y5G4

PCDHGA9, Protocadherin gamma-A9, humanhuman

Known RBP Predictions only

Length 932 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA9Q9Y5G4 SLC9A6-201ENST00000370695 4725 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
PCDHGA9Q9Y5G4 COLEC11-206ENST00000403096 1557 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
PCDHGA9Q9Y5G4 GPC2-201ENST00000292377 2532 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
PCDHGA9Q9Y5G4 NFATC4-218ENST00000554966 2506 ntAPPRIS ALT2 TSL 1 (best) BASIC16.36■□□□□ 0.21
PCDHGA9Q9Y5G4 NFATC4-225ENST00000556169 2509 ntAPPRIS ALT2 TSL 1 (best) BASIC16.36■□□□□ 0.21
PCDHGA9Q9Y5G4 RPS12-201ENST00000230050 631 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
PCDHGA9Q9Y5G4 GSTZ1-202ENST00000349555 867 ntTSL 2 BASIC16.36■□□□□ 0.21
PCDHGA9Q9Y5G4 MRPL55-208ENST00000366734 990 ntAPPRIS P1 TSL 2 BASIC16.36■□□□□ 0.21
PCDHGA9Q9Y5G4 MRPL55-217ENST00000366746 565 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
PCDHGA9Q9Y5G4 FCN1-201ENST00000371806 1286 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
PCDHGA9Q9Y5G4 GYG2P1-204ENST00000382966 639 ntTSL 3 BASIC16.36■□□□□ 0.21
PCDHGA9Q9Y5G4 ANKRD54-202ENST00000406423 954 ntTSL 3 BASIC16.36■□□□□ 0.21
PCDHGA9Q9Y5G4 MCFD2-205ENST00000409218 648 ntAPPRIS P1 TSL 2 BASIC16.36■□□□□ 0.21
PCDHGA9Q9Y5G4 SLC4A1APP2-201ENST00000424054 1259 ntBASIC16.36■□□□□ 0.21
PCDHGA9Q9Y5G4 AC134772.1-202ENST00000435578 549 ntTSL 4 BASIC16.36■□□□□ 0.21
PCDHGA9Q9Y5G4 AL133375.1-201ENST00000500590 980 ntTSL 5 BASIC16.36■□□□□ 0.21
PCDHGA9Q9Y5G4 AC012645.3-201ENST00000568506 470 ntTSL 3 BASIC16.36■□□□□ 0.21
PCDHGA9Q9Y5G4 SEC11C-205ENST00000588875 718 ntTSL 2 BASIC16.36■□□□□ 0.21
PCDHGA9Q9Y5G4 AD001527.2-201ENST00000622994 785 ntBASIC16.36■□□□□ 0.21
PCDHGA9Q9Y5G4 JMJD6-202ENST00000397625 1603 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
PCDHGA9Q9Y5G4 SHC3-202ENST00000375835 9768 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
PCDHGA9Q9Y5G4 ACSM2A-201ENST00000219054 1988 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
PCDHGA9Q9Y5G4 OLFM2-203ENST00000590841 1665 ntTSL 2 BASIC16.36■□□□□ 0.21
PCDHGA9Q9Y5G4 FAM49B-214ENST00000519540 2021 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
PCDHGA9Q9Y5G4 YTHDF3-212ENST00000621413 2370 ntTSL 5 BASIC16.36■□□□□ 0.21
PCDHGA9Q9Y5G4 XXYLT1-201ENST00000310380 2727 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
PCDHGA9Q9Y5G4 BMP8B-201ENST00000372827 4822 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
PCDHGA9Q9Y5G4 REEP4-201ENST00000306306 1710 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
PCDHGA9Q9Y5G4 TMEM177-204ENST00000424086 1738 ntAPPRIS P1 TSL 2 BASIC16.36■□□□□ 0.21
PCDHGA9Q9Y5G4 TMPRSS2-206ENST00000458356 1701 ntAPPRIS P1 TSL 2 BASIC16.36■□□□□ 0.21
PCDHGA9Q9Y5G4 NPR3-203ENST00000415167 1753 ntAPPRIS P3 TSL 1 (best) BASIC16.36■□□□□ 0.21
PCDHGA9Q9Y5G4 VPS26A-202ENST00000373382 3229 ntAPPRIS P1 TSL 5 BASIC16.36■□□□□ 0.21
PCDHGA9Q9Y5G4 CIZ1-226ENST00000629610 2855 ntAPPRIS ALT2 TSL 2 BASIC16.36■□□□□ 0.21
PCDHGA9Q9Y5G4 FAM129C-202ENST00000335393 2508 ntAPPRIS P3 TSL 1 (best) BASIC16.36■□□□□ 0.21
PCDHGA9Q9Y5G4 UBR3-203ENST00000418381 7951 ntAPPRIS P1 TSL 5 BASIC16.36■□□□□ 0.21
PCDHGA9Q9Y5G4 RIC8A-208ENST00000527696 2565 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
PCDHGA9Q9Y5G4 ACSL6-205ENST00000379246 2622 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
PCDHGA9Q9Y5G4 GMCL1P1-201ENST00000463439 1581 ntBASIC16.35■□□□□ 0.21
PCDHGA9Q9Y5G4 FAM46A-203ENST00000369756 5537 ntAPPRIS ALT2 TSL 1 (best) BASIC16.35■□□□□ 0.21
PCDHGA9Q9Y5G4 LTBP1-203ENST00000404816 6333 ntAPPRIS P4 TSL 5 BASIC16.35■□□□□ 0.21
PCDHGA9Q9Y5G4 RXRB-202ENST00000374685 2846 ntAPPRIS ALT1 TSL 1 (best) BASIC16.35■□□□□ 0.21
PCDHGA9Q9Y5G4 P2RY6-209ENST00000540342 1611 ntAPPRIS P1 TSL 2 BASIC16.35■□□□□ 0.21
PCDHGA9Q9Y5G4 RILPL2-201ENST00000280571 6141 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
PCDHGA9Q9Y5G4 LMNA-207ENST00000368301 2461 ntTSL 2 BASIC16.35■□□□□ 0.21
PCDHGA9Q9Y5G4 BCR-201ENST00000305877 7082 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
PCDHGA9Q9Y5G4 FST-202ENST00000396947 2538 ntTSL 5 BASIC16.35■□□□□ 0.21
PCDHGA9Q9Y5G4 HELT-201ENST00000338875 1008 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
PCDHGA9Q9Y5G4 COLEC11-202ENST00000349077 1259 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
PCDHGA9Q9Y5G4 SMN1-201ENST00000351205 900 ntAPPRIS P3 TSL 1 (best) BASIC16.35■□□□□ 0.21
PCDHGA9Q9Y5G4 PDE4D-204ENST00000358923 2969 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
PCDHGA9Q9Y5G4 AL355310.2-201ENST00000369843 688 ntTSL 3 BASIC16.35■□□□□ 0.21
PCDHGA9Q9Y5G4 RPA2-202ENST00000373909 1162 ntTSL 3 BASIC16.35■□□□□ 0.21
PCDHGA9Q9Y5G4 SMN2-201ENST00000380741 900 ntAPPRIS P4 TSL 1 (best) BASIC16.35■□□□□ 0.21
PCDHGA9Q9Y5G4 YWHAZ-203ENST00000395951 964 ntAPPRIS P1 TSL 2 BASIC16.35■□□□□ 0.21
PCDHGA9Q9Y5G4 AC007967.2-201ENST00000432613 625 ntBASIC16.35■□□□□ 0.21
PCDHGA9Q9Y5G4 AC103564.2-201ENST00000432853 1299 ntBASIC16.35■□□□□ 0.21
PCDHGA9Q9Y5G4 BX005266.1-201ENST00000473402 457 ntBASIC16.35■□□□□ 0.21
PCDHGA9Q9Y5G4 AP000442.1-201ENST00000533552 769 ntTSL 5 BASIC16.35■□□□□ 0.21
PCDHGA9Q9Y5G4 LDLRAD2-203ENST00000543870 1180 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
PCDHGA9Q9Y5G4 AC106782.2-201ENST00000563252 992 ntTSL 3 BASIC16.35■□□□□ 0.21
PCDHGA9Q9Y5G4 ICAM2-205ENST00000578379 1064 ntTSL 5 BASIC16.35■□□□□ 0.21
PCDHGA9Q9Y5G4 ICAM2-206ENST00000578892 1056 ntTSL 3 BASIC16.35■□□□□ 0.21
PCDHGA9Q9Y5G4 LINC01842-201ENST00000588275 768 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
PCDHGA9Q9Y5G4 SMN2-216ENST00000638794 846 ntAPPRIS ALT2 TSL 5 BASIC16.35■□□□□ 0.21
PCDHGA9Q9Y5G4 PRORSD1P-202ENST00000563365 2154 ntBASIC16.35■□□□□ 0.21
PCDHGA9Q9Y5G4 POC1B-GALNT4-201ENST00000547474 2207 ntTSL 2 BASIC16.35■□□□□ 0.21
PCDHGA9Q9Y5G4 TNRC18P3-201ENST00000441896 2691 ntBASIC16.35■□□□□ 0.21
PCDHGA9Q9Y5G4 LCA10-201ENST00000618311 1392 ntTSL 2 BASIC16.35■□□□□ 0.21
PCDHGA9Q9Y5G4 MFHAS1-201ENST00000276282 6414 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
PCDHGA9Q9Y5G4 ZNF133-210ENST00000535822 2341 ntTSL 3 BASIC16.35■□□□□ 0.21
PCDHGA9Q9Y5G4 RTN4-204ENST00000357732 2390 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
PCDHGA9Q9Y5G4 KIAA1586-201ENST00000370733 2933 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
PCDHGA9Q9Y5G4 MED29-202ENST00000594368 1471 ntTSL 2 BASIC16.35■□□□□ 0.21
PCDHGA9Q9Y5G4 SQSTM1-202ENST00000389805 2986 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
PCDHGA9Q9Y5G4 SLC1A5-205ENST00000594991 2031 ntTSL 2 BASIC16.35■□□□□ 0.21
PCDHGA9Q9Y5G4 RAB3IP-202ENST00000362025 2055 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
PCDHGA9Q9Y5G4 TRIM41-202ENST00000351937 2696 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
PCDHGA9Q9Y5G4 C3orf18-201ENST00000357203 2655 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
PCDHGA9Q9Y5G4 HPDL-201ENST00000334815 1629 ntAPPRIS P1 BASIC16.34■□□□□ 0.21
PCDHGA9Q9Y5G4 TNFAIP1-202ENST00000544907 1656 ntTSL 2 BASIC16.34■□□□□ 0.21
PCDHGA9Q9Y5G4 ALDH1A3-201ENST00000329841 3924 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
PCDHGA9Q9Y5G4 RUSC1-214ENST00000490373 1700 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
PCDHGA9Q9Y5G4 CRELD1-206ENST00000452070 1778 ntAPPRIS P1 TSL 2 BASIC16.34■□□□□ 0.21
PCDHGA9Q9Y5G4 MYC-207ENST00000621592 2366 ntAPPRIS ALT1 TSL 1 (best) BASIC16.34■□□□□ 0.21
PCDHGA9Q9Y5G4 LINC00472-203ENST00000426635 2958 ntTSL 2 BASIC16.34■□□□□ 0.21
PCDHGA9Q9Y5G4 AP001273.2-201ENST00000638767 2993 ntAPPRIS P1 TSL 5 BASIC16.34■□□□□ 0.21
PCDHGA9Q9Y5G4 ADSL-202ENST00000342312 1808 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
PCDHGA9Q9Y5G4 AC142086.1-202ENST00000398669 1839 ntTSL 2 BASIC16.34■□□□□ 0.21
PCDHGA9Q9Y5G4 OBSL1-203ENST00000373876 5503 ntTSL 5 BASIC16.34■□□□□ 0.21
PCDHGA9Q9Y5G4 MEST-201ENST00000223215 2465 ntAPPRIS P4 TSL 1 (best) BASIC16.34■□□□□ 0.21
PCDHGA9Q9Y5G4 CCDC137-201ENST00000329214 2468 ntAPPRIS P2 TSL 1 (best) BASIC16.34■□□□□ 0.21
PCDHGA9Q9Y5G4 AC105285.1-202ENST00000499322 1866 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
PCDHGA9Q9Y5G4 KRTCAP2-201ENST00000295682 552 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
PCDHGA9Q9Y5G4 BRCC3-202ENST00000340647 1101 ntAPPRIS P2 TSL 2 BASIC16.34■□□□□ 0.21
PCDHGA9Q9Y5G4 DUSP12-201ENST00000367943 1270 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
PCDHGA9Q9Y5G4 HIST1H2BL-201ENST00000377401 488 ntAPPRIS P1 BASIC16.34■□□□□ 0.21
PCDHGA9Q9Y5G4 PARK7-203ENST00000377491 977 ntAPPRIS P1 TSL 3 BASIC16.34■□□□□ 0.21
PCDHGA9Q9Y5G4 NDUFA6-202ENST00000498737 1256 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
PCDHGA9Q9Y5G4 AC136632.2-201ENST00000512891 861 ntBASIC16.34■□□□□ 0.21
PCDHGA9Q9Y5G4 MRNIP-205ENST00000518235 1244 ntAPPRIS ALT2 TSL 2 BASIC16.34■□□□□ 0.21
Retrieved 100 of 98,524 protein–RNA pairs in 39.8 ms