Protein–RNA interactions for Protein: Q9Y2Y8

PRG3, Proteoglycan 3, humanhuman

Predicted RBP Predictions only

Length 225 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRG3Q9Y2Y8 ARHGEF28-203ENST00000426542 6118 ntAPPRIS ALT2 TSL 1 (best) BASIC18.66■□□□□ 0.58
PRG3Q9Y2Y8 CD82-201ENST00000227155 2289 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
PRG3Q9Y2Y8 ORC5-201ENST00000297431 1958 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
PRG3Q9Y2Y8 AC002310.6-201ENST00000624451 1377 ntBASIC18.66■□□□□ 0.58
PRG3Q9Y2Y8 SLC1A6-210ENST00000600144 1735 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
PRG3Q9Y2Y8 FOLH1-204ENST00000356696 2403 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
PRG3Q9Y2Y8 WDR13-201ENST00000218056 2124 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
PRG3Q9Y2Y8 RUVBL1-202ENST00000464873 2126 ntTSL 2 BASIC18.65■□□□□ 0.58
PRG3Q9Y2Y8 IDUA-210ENST00000514224 2130 ntTSL 2 BASIC18.65■□□□□ 0.58
PRG3Q9Y2Y8 PCCA-202ENST00000376285 2494 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
PRG3Q9Y2Y8 ZNF668-208ENST00000538906 2865 ntAPPRIS P1 TSL 2 BASIC18.65■□□□□ 0.58
PRG3Q9Y2Y8 CDKN2C-201ENST00000262662 2904 ntAPPRIS P1 TSL 2 BASIC18.65■□□□□ 0.58
PRG3Q9Y2Y8 TRNT1-205ENST00000402675 1935 ntTSL 2 BASIC18.65■□□□□ 0.58
PRG3Q9Y2Y8 NKIRAS1-202ENST00000412028 1605 ntAPPRIS ALT1 TSL 5 BASIC18.65■□□□□ 0.58
PRG3Q9Y2Y8 KBTBD11-201ENST00000320248 6710 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
PRG3Q9Y2Y8 MRPL20P1-201ENST00000400819 433 ntBASIC18.65■□□□□ 0.58
PRG3Q9Y2Y8 TREML1-203ENST00000437044 647 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
PRG3Q9Y2Y8 AC010624.2-201ENST00000600998 575 ntTSL 5 BASIC18.65■□□□□ 0.58
PRG3Q9Y2Y8 LINC00623-201ENST00000613486 486 ntTSL 5 BASIC18.65■□□□□ 0.58
PRG3Q9Y2Y8 SLC2A11-204ENST00000398356 2388 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
PRG3Q9Y2Y8 AHRR-204ENST00000506456 2350 ntTSL 2 BASIC18.65■□□□□ 0.58
PRG3Q9Y2Y8 NOMO2-212ENST00000622306 4252 ntAPPRIS P3 TSL 1 (best) BASIC18.65■□□□□ 0.58
PRG3Q9Y2Y8 CBX1-202ENST00000393408 2422 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
PRG3Q9Y2Y8 CORO1C-204ENST00000541050 2487 ntAPPRIS P1 TSL 2 BASIC18.65■□□□□ 0.58
PRG3Q9Y2Y8 FNDC8-201ENST00000158009 1388 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
PRG3Q9Y2Y8 DCST1-204ENST00000423025 2199 ntAPPRIS ALT2 TSL 2 BASIC18.65■□□□□ 0.58
PRG3Q9Y2Y8 OXSR1-201ENST00000311806 4553 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
PRG3Q9Y2Y8 GYG1-214ENST00000627418 1831 ntTSL 5 BASIC18.65■□□□□ 0.58
PRG3Q9Y2Y8 PHKA2-201ENST00000379942 5559 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
PRG3Q9Y2Y8 SLC47A2-201ENST00000325411 2258 ntAPPRIS P3 TSL 1 (best) BASIC18.65■□□□□ 0.58
PRG3Q9Y2Y8 RHOBTB1-201ENST00000337910 4473 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.58
PRG3Q9Y2Y8 TIMM13-201ENST00000215570 1973 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.58
PRG3Q9Y2Y8 PLD3-207ENST00000409735 2140 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
PRG3Q9Y2Y8 TXNRD2-203ENST00000400519 3155 ntAPPRIS ALT2 TSL 1 (best) BASIC18.64■□□□□ 0.57
PRG3Q9Y2Y8 FGFBP2-201ENST00000259989 1168 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
PRG3Q9Y2Y8 ZNF81-201ENST00000334937 610 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
PRG3Q9Y2Y8 MYL6-202ENST00000348108 722 ntAPPRIS ALT1 TSL 3 BASIC18.64■□□□□ 0.57
PRG3Q9Y2Y8 DNAJC4-203ENST00000355040 759 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
PRG3Q9Y2Y8 IGLL3P-201ENST00000412472 434 ntBASIC18.64■□□□□ 0.57
PRG3Q9Y2Y8 AC211486.1-202ENST00000416371 468 ntBASIC18.64■□□□□ 0.57
PRG3Q9Y2Y8 AC109309.1-201ENST00000418995 435 ntTSL 3 BASIC18.64■□□□□ 0.57
PRG3Q9Y2Y8 MCCD1P2-201ENST00000423228 335 ntBASIC18.64■□□□□ 0.57
PRG3Q9Y2Y8 DHRS12-203ENST00000444610 1162 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
PRG3Q9Y2Y8 USP30-AS1-201ENST00000478808 656 ntTSL 2 BASIC18.64■□□□□ 0.57
PRG3Q9Y2Y8 ALG1L5P-201ENST00000482043 771 ntBASIC18.64■□□□□ 0.57
PRG3Q9Y2Y8 MRPL20-203ENST00000482352 1049 ntTSL 2 BASIC18.64■□□□□ 0.57
PRG3Q9Y2Y8 AC211476.1-201ENST00000503899 468 ntBASIC18.64■□□□□ 0.57
PRG3Q9Y2Y8 MVB12A-211ENST00000529939 1091 ntTSL 3 BASIC18.64■□□□□ 0.57
PRG3Q9Y2Y8 RIN3-211ENST00000557762 517 ntTSL 3 BASIC18.64■□□□□ 0.57
PRG3Q9Y2Y8 AC126696.3-201ENST00000563993 575 ntTSL 4 BASIC18.64■□□□□ 0.57
PRG3Q9Y2Y8 SEC11C-205ENST00000588875 718 ntTSL 2 BASIC18.64■□□□□ 0.57
PRG3Q9Y2Y8 AC079781.4-201ENST00000641908 219 ntBASIC18.64■□□□□ 0.57
PRG3Q9Y2Y8 RTN4-201ENST00000317610 2333 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
PRG3Q9Y2Y8 PSMD4-201ENST00000368881 1333 ntTSL 5 BASIC18.64■□□□□ 0.57
PRG3Q9Y2Y8 ADORA2A-214ENST00000611543 2412 ntAPPRIS P1 TSL 5 BASIC18.64■□□□□ 0.57
PRG3Q9Y2Y8 UBR3-203ENST00000418381 7951 ntAPPRIS P1 TSL 5 BASIC18.64■□□□□ 0.57
PRG3Q9Y2Y8 EEPD1-201ENST00000242108 4765 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
PRG3Q9Y2Y8 SOD2-215ENST00000546087 2558 ntTSL 2 BASIC18.64■□□□□ 0.57
PRG3Q9Y2Y8 RAI2-203ENST00000415486 2037 ntTSL 2 BASIC18.64■□□□□ 0.57
PRG3Q9Y2Y8 SMPD3-211ENST00000568373 2073 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
PRG3Q9Y2Y8 USP18-201ENST00000215794 2129 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
PRG3Q9Y2Y8 STK25-203ENST00000403346 2210 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
PRG3Q9Y2Y8 ZNF133-210ENST00000535822 2341 ntTSL 3 BASIC18.63■□□□□ 0.57
PRG3Q9Y2Y8 SHISA5-220ENST00000619810 2385 ntTSL 2 BASIC18.63■□□□□ 0.57
PRG3Q9Y2Y8 NUDT9-201ENST00000302174 1701 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
PRG3Q9Y2Y8 MMD2-202ENST00000404774 2415 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
PRG3Q9Y2Y8 REXO1L11P-201ENST00000620964 1927 ntBASIC18.63■□□□□ 0.57
PRG3Q9Y2Y8 CDH24-205ENST00000554034 2759 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
PRG3Q9Y2Y8 SMOC1-201ENST00000361956 2040 ntAPPRIS ALT1 TSL 1 (best) BASIC18.63■□□□□ 0.57
PRG3Q9Y2Y8 CHD1L-204ENST00000431239 2907 ntTSL 5 BASIC18.63■□□□□ 0.57
PRG3Q9Y2Y8 KRTCAP2-201ENST00000295682 552 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
PRG3Q9Y2Y8 C19orf70-201ENST00000309324 896 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
PRG3Q9Y2Y8 AP002414.1-201ENST00000391405 1147 ntBASIC18.63■□□□□ 0.57
PRG3Q9Y2Y8 TRAK1-209ENST00000487159 5536 ntAPPRIS ALT2 TSL 5 BASIC18.63■□□□□ 0.57
PRG3Q9Y2Y8 HOXD8-204ENST00000544999 1235 ntAPPRIS ALT2 TSL 5 BASIC18.63■□□□□ 0.57
PRG3Q9Y2Y8 WSCD1-209ENST00000574232 2129 ntAPPRIS P1 TSL 5 BASIC18.63■□□□□ 0.57
PRG3Q9Y2Y8 GIPC1-213ENST00000591349 1068 ntTSL 2 BASIC18.63■□□□□ 0.57
PRG3Q9Y2Y8 AL022328.4-201ENST00000608025 1001 ntTSL 2 BASIC18.63■□□□□ 0.57
PRG3Q9Y2Y8 AC010654.1-201ENST00000615722 808 ntBASIC18.63■□□□□ 0.57
PRG3Q9Y2Y8 NBL1-212ENST00000621723 2133 ntAPPRIS P3 TSL 2 BASIC18.63■□□□□ 0.57
PRG3Q9Y2Y8 CAPN1-201ENST00000279247 3007 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
PRG3Q9Y2Y8 COL16A1-203ENST00000373672 5736 ntAPPRIS P1 TSL 5 BASIC18.63■□□□□ 0.57
PRG3Q9Y2Y8 PTGER3-201ENST00000306666 2333 ntAPPRIS ALT2 TSL 1 (best) BASIC18.63■□□□□ 0.57
PRG3Q9Y2Y8 SLCO4A1-AS1-202ENST00000433126 1420 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
PRG3Q9Y2Y8 GTF3C5-202ENST00000372097 2406 ntAPPRIS P3 TSL 1 (best) BASIC18.63■□□□□ 0.57
PRG3Q9Y2Y8 IL15-201ENST00000296545 2472 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
PRG3Q9Y2Y8 ALDH2-202ENST00000416293 1572 ntTSL 2 BASIC18.63■□□□□ 0.57
PRG3Q9Y2Y8 TGDS-201ENST00000261296 1905 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
PRG3Q9Y2Y8 DOC2B-203ENST00000613549 6048 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
PRG3Q9Y2Y8 DFNA5-203ENST00000409970 2005 ntTSL 5 BASIC18.62■□□□□ 0.57
PRG3Q9Y2Y8 DYRK1B-203ENST00000430012 2007 ntAPPRIS ALT1 TSL 5 BASIC18.62■□□□□ 0.57
PRG3Q9Y2Y8 TCP11-228ENST00000611141 2130 ntAPPRIS ALT2 TSL 1 (best) BASIC18.62■□□□□ 0.57
PRG3Q9Y2Y8 ZDHHC20-209ENST00000542645 5315 ntAPPRIS ALT2 TSL 2 BASIC18.62■□□□□ 0.57
PRG3Q9Y2Y8 NEU4-203ENST00000404257 2352 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
PRG3Q9Y2Y8 PGP-201ENST00000333503 2727 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
PRG3Q9Y2Y8 DNLZ-202ENST00000371739 2934 ntTSL 5 BASIC18.62■□□□□ 0.57
PRG3Q9Y2Y8 FOXP4-202ENST00000373057 3300 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
PRG3Q9Y2Y8 ITGA6-201ENST00000264107 5618 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
PRG3Q9Y2Y8 ALKBH6-201ENST00000252984 955 ntAPPRIS ALT2 TSL 1 (best) BASIC18.62■□□□□ 0.57
PRG3Q9Y2Y8 RPS17-201ENST00000330244 592 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Retrieved 100 of 98,524 protein–RNA pairs in 32.8 ms