Protein–RNA interactions for Protein: Q9Y2I6

NINL, Ninein-like protein, humanhuman

Predictions only

Length 1,382 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NINLQ9Y2I6 SHKBP1-201ENST00000291842 2363 ntAPPRIS P1 TSL 1 (best) BASIC23.79■■□□□ 1.4
NINLQ9Y2I6 CGREF1-201ENST00000260595 1177 ntAPPRIS ALT2 TSL 5 BASIC23.79■■□□□ 1.4
NINLQ9Y2I6 DNAJC4-203ENST00000355040 759 ntTSL 1 (best) BASIC23.79■■□□□ 1.4
NINLQ9Y2I6 ATP5G3-202ENST00000392541 842 ntAPPRIS P1 TSL 1 (best) BASIC23.79■■□□□ 1.4
NINLQ9Y2I6 LINC01972-201ENST00000422271 553 ntTSL 3 BASIC23.79■■□□□ 1.4
NINLQ9Y2I6 POLD4-207ENST00000531239 584 ntTSL 2 BASIC23.79■■□□□ 1.4
NINLQ9Y2I6 ELOF1-204ENST00000587806 1172 ntTSL 2 BASIC23.79■■□□□ 1.4
NINLQ9Y2I6 SPSB1-201ENST00000328089 3120 ntAPPRIS P1 TSL 1 (best) BASIC23.79■■□□□ 1.4
NINLQ9Y2I6 ZNF205-206ENST00000620094 2309 ntAPPRIS P1 TSL 1 (best) BASIC23.79■■□□□ 1.4
NINLQ9Y2I6 NOC2LP2-201ENST00000407594 1944 ntBASIC23.79■■□□□ 1.4
NINLQ9Y2I6 UBE2I-203ENST00000397514 2976 ntAPPRIS P1 TSL 1 (best) BASIC23.79■■□□□ 1.4
NINLQ9Y2I6 CSAD-209ENST00000453446 1774 ntAPPRIS P1 TSL 1 (best) BASIC23.79■■□□□ 1.4
NINLQ9Y2I6 FNDC8-201ENST00000158009 1388 ntAPPRIS P1 TSL 1 (best) BASIC23.79■■□□□ 1.4
NINLQ9Y2I6 TMEM177-201ENST00000272521 1394 ntAPPRIS P1 TSL 1 (best) BASIC23.79■■□□□ 1.4
NINLQ9Y2I6 DLGAP4-201ENST00000339266 5016 ntAPPRIS ALT2 TSL 5 BASIC23.79■■□□□ 1.4
NINLQ9Y2I6 PJA1-202ENST00000374571 2672 ntAPPRIS ALT2 TSL 1 (best) BASIC23.79■■□□□ 1.4
NINLQ9Y2I6 AGPAT5-201ENST00000285518 3685 ntAPPRIS P1 TSL 1 (best) BASIC23.79■■□□□ 1.4
NINLQ9Y2I6 CLN3-203ENST00000357806 1469 ntTSL 1 (best) BASIC23.79■■□□□ 1.4
NINLQ9Y2I6 RGS9BP-201ENST00000334176 2894 ntAPPRIS P1 BASIC23.79■■□□□ 1.4
NINLQ9Y2I6 TFAP2D-201ENST00000008391 1711 ntAPPRIS P1 TSL 1 (best) BASIC23.79■■□□□ 1.4
NINLQ9Y2I6 ACSF2-201ENST00000300441 2235 ntAPPRIS P1 TSL 1 (best) BASIC23.79■■□□□ 1.4
NINLQ9Y2I6 AC120498.9-201ENST00000339021 3867 ntBASIC23.79■■□□□ 1.4
NINLQ9Y2I6 KCNMA1-293ENST00000640969 5789 ntAPPRIS ALT2 TSL 5 BASIC23.79■■□□□ 1.4
NINLQ9Y2I6 BEGAIN-202ENST00000443071 2744 ntTSL 1 (best) BASIC23.79■■□□□ 1.4
NINLQ9Y2I6 EIF4A1-203ENST00000577269 1319 ntTSL 1 (best) BASIC23.79■■□□□ 1.4
NINLQ9Y2I6 AC008764.1-201ENST00000409035 2567 ntAPPRIS P1 TSL 2 BASIC23.79■■□□□ 1.4
NINLQ9Y2I6 AHRR-209ENST00000512529 1912 ntTSL 5 BASIC23.79■■□□□ 1.4
NINLQ9Y2I6 MBD4-202ENST00000393278 1684 ntTSL 1 (best) BASIC23.79■■□□□ 1.4
NINLQ9Y2I6 RAPH1-201ENST00000308091 2768 ntAPPRIS ALT2 TSL 1 (best) BASIC23.79■■□□□ 1.4
NINLQ9Y2I6 WNT10B-201ENST00000301061 2274 ntAPPRIS P1 TSL 1 (best) BASIC23.79■■□□□ 1.4
NINLQ9Y2I6 CBX2-201ENST00000269399 1061 ntTSL 1 (best) BASIC23.78■■□□□ 1.4
NINLQ9Y2I6 SMN1-201ENST00000351205 900 ntAPPRIS P3 TSL 1 (best) BASIC23.78■■□□□ 1.4
NINLQ9Y2I6 SMN2-201ENST00000380741 900 ntAPPRIS P4 TSL 1 (best) BASIC23.78■■□□□ 1.4
NINLQ9Y2I6 TMUB1-204ENST00000476627 882 ntAPPRIS P1 TSL 3 BASIC23.78■■□□□ 1.4
NINLQ9Y2I6 AC018558.2-201ENST00000566562 480 ntTSL 3 BASIC23.78■■□□□ 1.4
NINLQ9Y2I6 OR5AH1P-202ENST00000597822 431 ntTSL 3 BASIC23.78■■□□□ 1.4
NINLQ9Y2I6 SMN2-216ENST00000638794 846 ntAPPRIS ALT2 TSL 5 BASIC23.78■■□□□ 1.4
NINLQ9Y2I6 RBM24-202ENST00000379052 2703 ntAPPRIS P1 TSL 1 (best) BASIC23.78■■□□□ 1.4
NINLQ9Y2I6 WTAP-205ENST00000614346 1623 ntTSL 2 BASIC23.78■■□□□ 1.4
NINLQ9Y2I6 RAB3IP-202ENST00000362025 2055 ntTSL 1 (best) BASIC23.78■■□□□ 1.4
NINLQ9Y2I6 ADRA1A-205ENST00000380582 2089 ntTSL 1 (best) BASIC23.78■■□□□ 1.4
NINLQ9Y2I6 PRKAG1-206ENST00000548065 2071 ntAPPRIS P1 TSL 1 (best) BASIC23.78■■□□□ 1.4
NINLQ9Y2I6 C16orf45-201ENST00000300006 2404 ntAPPRIS P1 TSL 1 (best) BASIC23.78■■□□□ 1.4
NINLQ9Y2I6 PODN-203ENST00000395871 2744 ntTSL 5 BASIC23.78■■□□□ 1.4
NINLQ9Y2I6 PML-221ENST00000569965 2148 ntAPPRIS ALT2 TSL 1 (best) BASIC23.78■■□□□ 1.4
NINLQ9Y2I6 RANBP3-220ENST00000591092 1783 ntAPPRIS ALT2 TSL 1 (best) BASIC23.78■■□□□ 1.4
NINLQ9Y2I6 SCYL1-203ENST00000420247 2583 ntTSL 1 (best) BASIC23.78■■□□□ 1.4
NINLQ9Y2I6 RASL11A-201ENST00000241463 1543 ntAPPRIS P1 TSL 1 (best) BASIC23.78■■□□□ 1.4
NINLQ9Y2I6 APLP2-210ENST00000528499 2530 ntTSL 1 (best) BASIC23.78■■□□□ 1.4
NINLQ9Y2I6 CPT2-207ENST00000636867 2643 ntTSL 5 BASIC23.78■■□□□ 1.4
NINLQ9Y2I6 CSNK2B-203ENST00000375882 948 ntAPPRIS P1 TSL 1 (best) BASIC23.78■■□□□ 1.4
NINLQ9Y2I6 DNAJB3-202ENST00000449667 1266 ntBASIC23.78■■□□□ 1.4
NINLQ9Y2I6 AL390729.1-201ENST00000456651 587 ntTSL 2 BASIC23.78■■□□□ 1.4
NINLQ9Y2I6 TNFRSF13B-201ENST00000261652 1357 ntAPPRIS P2 TSL 1 (best) BASIC23.77■■□□□ 1.4
NINLQ9Y2I6 CTSB-204ENST00000453527 2011 ntAPPRIS P1 TSL 2 BASIC23.77■■□□□ 1.4
NINLQ9Y2I6 HCN1-202ENST00000634658 4738 ntTSL 3 BASIC23.77■■□□□ 1.4
NINLQ9Y2I6 RAI14-201ENST00000265109 5092 ntAPPRIS P1 TSL 1 (best) BASIC23.77■■□□□ 1.4
NINLQ9Y2I6 EWSR1-202ENST00000332035 1989 ntAPPRIS ALT2 TSL 2 BASIC23.77■■□□□ 1.4
NINLQ9Y2I6 NES-201ENST00000368223 5558 ntAPPRIS P1 TSL 1 (best) BASIC23.77■■□□□ 1.4
NINLQ9Y2I6 SYTL3-201ENST00000297239 2292 ntAPPRIS ALT1 TSL 1 (best) BASIC23.77■■□□□ 1.4
NINLQ9Y2I6 LONP1-201ENST00000360614 3236 ntAPPRIS P1 TSL 1 (best) BASIC23.77■■□□□ 1.4
NINLQ9Y2I6 HMBS-203ENST00000442944 1548 ntTSL 5 BASIC23.77■■□□□ 1.4
NINLQ9Y2I6 IL17RC-201ENST00000295981 2621 ntAPPRIS P4 TSL 2 BASIC23.77■■□□□ 1.4
NINLQ9Y2I6 KCNQ5-207ENST00000403813 6539 ntAPPRIS ALT2 TSL 5 BASIC23.77■■□□□ 1.4
NINLQ9Y2I6 SUPT20H-203ENST00000360252 2843 ntAPPRIS P3 TSL 1 (best) BASIC23.77■■□□□ 1.4
NINLQ9Y2I6 CIB3-201ENST00000269878 711 ntAPPRIS P1 TSL 1 (best) BASIC23.77■■□□□ 1.4
NINLQ9Y2I6 CLEC1B-201ENST00000298527 952 ntAPPRIS P1 TSL 1 (best) BASIC23.77■■□□□ 1.4
NINLQ9Y2I6 AP1S3-203ENST00000396654 830 ntAPPRIS P2 TSL 2 BASIC23.77■■□□□ 1.4
NINLQ9Y2I6 RHOQP3-201ENST00000437982 621 ntBASIC23.77■■□□□ 1.4
NINLQ9Y2I6 AC112482.1-201ENST00000492080 688 ntBASIC23.77■■□□□ 1.4
NINLQ9Y2I6 AC096734.2-201ENST00000562054 433 ntBASIC23.77■■□□□ 1.4
NINLQ9Y2I6 AC002091.2-201ENST00000585297 402 ntTSL 2 BASIC23.77■■□□□ 1.4
NINLQ9Y2I6 GBA2-201ENST00000378088 1672 ntTSL 2 BASIC23.77■■□□□ 1.39
NINLQ9Y2I6 MAP3K13-212ENST00000448876 1681 ntTSL 1 (best) BASIC23.77■■□□□ 1.39
NINLQ9Y2I6 GPBAR1-201ENST00000479077 1869 ntAPPRIS P1 TSL 2 BASIC23.77■■□□□ 1.39
NINLQ9Y2I6 ULK3-220ENST00000569437 2611 ntAPPRIS ALT1 TSL 1 (best) BASIC23.76■■□□□ 1.39
NINLQ9Y2I6 MFSD11-219ENST00000593181 1922 ntTSL 1 (best) BASIC23.76■■□□□ 1.39
NINLQ9Y2I6 CD40-201ENST00000372276 1623 ntTSL 1 (best) BASIC23.76■■□□□ 1.39
NINLQ9Y2I6 CACTIN-201ENST00000221899 2797 ntAPPRIS P1 TSL 1 (best) BASIC23.76■■□□□ 1.39
NINLQ9Y2I6 TFEB-206ENST00000403298 2162 ntAPPRIS P1 TSL 5 BASIC23.76■■□□□ 1.39
NINLQ9Y2I6 AC008764.6-201ENST00000595909 2069 ntBASIC23.76■■□□□ 1.39
NINLQ9Y2I6 HIST4H4-204ENST00000539745 577 ntAPPRIS P1 BASIC23.76■■□□□ 1.39
NINLQ9Y2I6 MTDHP5-201ENST00000598980 586 ntBASIC23.76■■□□□ 1.39
NINLQ9Y2I6 CARHSP1-219ENST00000618335 2972 ntAPPRIS P1 TSL 4 BASIC23.76■■□□□ 1.39
NINLQ9Y2I6 AL662799.1-201ENST00000630418 496 ntTSL 5 BASIC23.76■■□□□ 1.39
NINLQ9Y2I6 ATP11C-203ENST00000370557 6924 ntAPPRIS ALT2 TSL 5 BASIC23.76■■□□□ 1.39
NINLQ9Y2I6 ADAMTS19-205ENST00000638972 5089 ntAPPRIS P1 TSL 1 (best) BASIC23.75■■□□□ 1.39
NINLQ9Y2I6 RGN-202ENST00000352078 1611 ntAPPRIS P1 TSL 1 (best) BASIC23.75■■□□□ 1.39
NINLQ9Y2I6 SSC4D-201ENST00000275560 2801 ntAPPRIS P1 TSL 1 (best) BASIC23.75■■□□□ 1.39
NINLQ9Y2I6 SDHA-204ENST00000504309 2067 ntTSL 5 BASIC23.75■■□□□ 1.39
NINLQ9Y2I6 GBGT1-203ENST00000372040 1980 ntAPPRIS P1 TSL 1 (best) BASIC23.75■■□□□ 1.39
NINLQ9Y2I6 KIF25-201ENST00000351261 1326 ntTSL 5 BASIC23.75■■□□□ 1.39
NINLQ9Y2I6 PSENEN-202ENST00000587708 1661 ntAPPRIS P1 TSL 1 (best) BASIC23.75■■□□□ 1.39
NINLQ9Y2I6 SSBP3-203ENST00000371319 1578 ntAPPRIS ALT1 TSL 2 BASIC23.75■■□□□ 1.39
NINLQ9Y2I6 BEST2-202ENST00000549706 2183 ntAPPRIS P1 TSL 5 BASIC23.75■■□□□ 1.39
NINLQ9Y2I6 HIST1H2BN-204ENST00000612898 1723 ntAPPRIS P1 BASIC23.75■■□□□ 1.39
NINLQ9Y2I6 AC127496.1-202ENST00000573602 2091 ntTSL 2 BASIC23.75■■□□□ 1.39
NINLQ9Y2I6 ECHDC1-214ENST00000474289 2443 ntAPPRIS P3 TSL 5 BASIC23.75■■□□□ 1.39
NINLQ9Y2I6 C6orf99-202ENST00000367073 769 ntTSL 5 BASIC23.75■■□□□ 1.39
NINLQ9Y2I6 COA5-202ENST00000409997 557 ntTSL 4 BASIC23.75■■□□□ 1.39
Retrieved 100 of 98,524 protein–RNA pairs in 39.9 ms