Protein–RNA interactions for Protein: Q9UQL6

HDAC5, Histone deacetylase 5, humanhuman

Predictions only

Length 1,122 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC5Q9UQL6 CCNJ-203ENST00000465148 2677 ntAPPRIS P1 TSL 2 BASIC21.82■■□□□ 1.08
HDAC5Q9UQL6 ANXA8-202ENST00000583448 1971 ntTSL 1 (best) BASIC21.82■■□□□ 1.08
HDAC5Q9UQL6 ZNF296-202ENST00000622376 1631 ntAPPRIS ALT2 TSL 1 (best) BASIC21.82■■□□□ 1.08
HDAC5Q9UQL6 TCEAL3-201ENST00000243286 1124 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
HDAC5Q9UQL6 AL049795.1-201ENST00000373604 642 ntTSL 3 BASIC21.82■■□□□ 1.08
HDAC5Q9UQL6 POMC-203ENST00000395826 959 ntAPPRIS P1 TSL 2 BASIC21.82■■□□□ 1.08
HDAC5Q9UQL6 VPS13A-AS1-201ENST00000415172 519 ntTSL 2 BASIC21.82■■□□□ 1.08
HDAC5Q9UQL6 IDH3B-206ENST00000474315 1279 ntAPPRIS ALT1 TSL 1 (best) BASIC21.82■■□□□ 1.08
HDAC5Q9UQL6 AL162171.1-201ENST00000556328 718 ntTSL 3 BASIC21.82■■□□□ 1.08
HDAC5Q9UQL6 AC139887.3-201ENST00000568585 713 ntBASIC21.82■■□□□ 1.08
HDAC5Q9UQL6 AC132872.3-201ENST00000620937 629 ntTSL 5 BASIC21.82■■□□□ 1.08
HDAC5Q9UQL6 TP73-AS1-207ENST00000624167 988 ntBASIC21.82■■□□□ 1.08
HDAC5Q9UQL6 TBC1D20-201ENST00000354200 4466 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
HDAC5Q9UQL6 PTPN21-208ENST00000556564 6166 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
HDAC5Q9UQL6 HAPLN4-201ENST00000291481 3449 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
HDAC5Q9UQL6 AC068880.1-201ENST00000507289 2297 ntBASIC21.82■■□□□ 1.08
HDAC5Q9UQL6 MFSD11-219ENST00000593181 1922 ntTSL 1 (best) BASIC21.82■■□□□ 1.08
HDAC5Q9UQL6 MYZAP-201ENST00000267853 2361 ntAPPRIS P3 TSL 1 (best) BASIC21.82■■□□□ 1.08
HDAC5Q9UQL6 APOLD1-202ENST00000356591 4646 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
HDAC5Q9UQL6 PRDM12-201ENST00000253008 2476 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
HDAC5Q9UQL6 BAG3-201ENST00000369085 2571 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
HDAC5Q9UQL6 FARP2-202ENST00000373287 2580 ntTSL 1 (best) BASIC21.82■■□□□ 1.08
HDAC5Q9UQL6 TRIM60-203ENST00000508504 1674 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
HDAC5Q9UQL6 HAPLN3-204ENST00000562889 1547 ntTSL 5 BASIC21.81■■□□□ 1.08
HDAC5Q9UQL6 RUNX1-207ENST00000437180 5967 ntAPPRIS P3 TSL 5 BASIC21.81■■□□□ 1.08
HDAC5Q9UQL6 PCCB-209ENST00000469217 1841 ntAPPRIS ALT2 TSL 2 BASIC21.81■■□□□ 1.08
HDAC5Q9UQL6 TRNT1-205ENST00000402675 1935 ntTSL 2 BASIC21.81■■□□□ 1.08
HDAC5Q9UQL6 SMIM29-201ENST00000335352 1160 ntTSL 2 BASIC21.81■■□□□ 1.08
HDAC5Q9UQL6 AC026396.1-201ENST00000419388 421 ntBASIC21.81■■□□□ 1.08
HDAC5Q9UQL6 ACTG1P4-201ENST00000425123 1122 ntBASIC21.81■■□□□ 1.08
HDAC5Q9UQL6 LAGE3P1-201ENST00000425356 484 ntBASIC21.81■■□□□ 1.08
HDAC5Q9UQL6 SATB2-203ENST00000428695 2135 ntTSL 1 (best) BASIC21.81■■□□□ 1.08
HDAC5Q9UQL6 AC018712.1-201ENST00000455767 687 ntBASIC21.81■■□□□ 1.08
HDAC5Q9UQL6 AC093909.1-201ENST00000504731 1122 ntBASIC21.81■■□□□ 1.08
HDAC5Q9UQL6 AC021066.1-201ENST00000549788 647 ntTSL 3 BASIC21.81■■□□□ 1.08
HDAC5Q9UQL6 RNF151-202ENST00000569210 853 ntTSL 2 BASIC21.81■■□□□ 1.08
HDAC5Q9UQL6 UBE2Q2-208ENST00000569423 2969 ntTSL 2 BASIC21.81■■□□□ 1.08
HDAC5Q9UQL6 PNMT-203ENST00000581428 677 ntTSL 2 BASIC21.81■■□□□ 1.08
HDAC5Q9UQL6 SLC39A1-210ENST00000617697 2214 ntAPPRIS P1 TSL 5 BASIC21.81■■□□□ 1.08
HDAC5Q9UQL6 THAP3-201ENST00000054650 1366 ntAPPRIS ALT2 TSL 1 (best) BASIC21.81■■□□□ 1.08
HDAC5Q9UQL6 ALKBH3-201ENST00000302708 1474 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
HDAC5Q9UQL6 GOLGA2P7-201ENST00000316967 2525 ntTSL 2 BASIC21.81■■□□□ 1.08
HDAC5Q9UQL6 DDIT4L-201ENST00000273990 2604 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
HDAC5Q9UQL6 EGR3-204ENST00000522910 1553 ntAPPRIS ALT1 TSL 2 BASIC21.81■■□□□ 1.08
HDAC5Q9UQL6 HECTD2-204ENST00000446394 4939 ntTSL 2 BASIC21.81■■□□□ 1.08
HDAC5Q9UQL6 MBD4-202ENST00000393278 1684 ntTSL 1 (best) BASIC21.81■■□□□ 1.08
HDAC5Q9UQL6 SCNN1D-201ENST00000325425 2679 ntAPPRIS ALT2 TSL 1 (best) BASIC21.81■■□□□ 1.08
HDAC5Q9UQL6 PLTP-202ENST00000372420 1530 ntTSL 2 BASIC21.8■■□□□ 1.08
HDAC5Q9UQL6 PGLYRP2-202ENST00000340880 2230 ntAPPRIS P2 TSL 1 (best) BASIC21.8■■□□□ 1.08
HDAC5Q9UQL6 CNST-202ENST00000366512 2422 ntTSL 1 (best) BASIC21.8■■□□□ 1.08
HDAC5Q9UQL6 CHPF-201ENST00000243776 3013 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
HDAC5Q9UQL6 PCDHA7-202ENST00000525929 5221 ntAPPRIS P2 TSL 1 (best) BASIC21.8■■□□□ 1.08
HDAC5Q9UQL6 HR-202ENST00000381418 6336 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
HDAC5Q9UQL6 AGFG1-201ENST00000310078 8668 ntAPPRIS P3 TSL 1 (best) BASIC21.8■■□□□ 1.08
HDAC5Q9UQL6 CHST11-205ENST00000549260 5696 ntAPPRIS ALT1 TSL 1 (best) BASIC21.8■■□□□ 1.08
HDAC5Q9UQL6 OLFM1-201ENST00000252854 2591 ntTSL 1 (best) BASIC21.8■■□□□ 1.08
HDAC5Q9UQL6 LGALS12-201ENST00000255684 1667 ntAPPRIS ALT2 TSL 1 (best) BASIC21.8■■□□□ 1.08
HDAC5Q9UQL6 TFAP2A-AS1-201ENST00000420777 1575 ntTSL 5 BASIC21.8■■□□□ 1.08
HDAC5Q9UQL6 CALB2-202ENST00000349553 1373 ntTSL 5 BASIC21.8■■□□□ 1.08
HDAC5Q9UQL6 DUSP12-201ENST00000367943 1270 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
HDAC5Q9UQL6 MCFD2-208ENST00000409973 821 ntAPPRIS P1 TSL 2 BASIC21.8■■□□□ 1.08
HDAC5Q9UQL6 AC034243.1-201ENST00000520838 587 ntTSL 2 BASIC21.8■■□□□ 1.08
HDAC5Q9UQL6 OR7E14P-202ENST00000530490 1290 ntBASIC21.8■■□□□ 1.08
HDAC5Q9UQL6 AC006557.2-201ENST00000592985 1240 ntBASIC21.8■■□□□ 1.08
HDAC5Q9UQL6 AL121894.2-201ENST00000602977 491 ntBASIC21.8■■□□□ 1.08
HDAC5Q9UQL6 AC107918.4-202ENST00000641623 219 ntBASIC21.8■■□□□ 1.08
HDAC5Q9UQL6 AC064853.6-201ENST00000642029 303 ntAPPRIS P1 BASIC21.8■■□□□ 1.08
HDAC5Q9UQL6 PPM1G-201ENST00000344034 2311 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
HDAC5Q9UQL6 TXNRD2-218ENST00000542719 2024 ntTSL 1 (best) BASIC21.8■■□□□ 1.08
HDAC5Q9UQL6 CRTAC1-201ENST00000309155 1946 ntAPPRIS ALT2 TSL 1 (best) BASIC21.8■■□□□ 1.08
HDAC5Q9UQL6 WDR90-215ENST00000549091 5589 ntAPPRIS ALT2 TSL 5 BASIC21.8■■□□□ 1.08
HDAC5Q9UQL6 SUSD4-208ENST00000494793 1833 ntTSL 5 BASIC21.8■■□□□ 1.08
HDAC5Q9UQL6 CA9-201ENST00000378357 1618 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
HDAC5Q9UQL6 GHRHR-205ENST00000409904 1613 ntTSL 1 (best) BASIC21.8■■□□□ 1.08
HDAC5Q9UQL6 HPS3-202ENST00000460120 2745 ntTSL 2 BASIC21.79■■□□□ 1.08
HDAC5Q9UQL6 POLI-207ENST00000579434 2705 ntTSL 1 (best) BASIC21.79■■□□□ 1.08
HDAC5Q9UQL6 TFCP2-204ENST00000548115 1862 ntTSL 5 BASIC21.79■■□□□ 1.08
HDAC5Q9UQL6 TMEM145-201ENST00000301204 1768 ntAPPRIS P2 TSL 2 BASIC21.79■■□□□ 1.08
HDAC5Q9UQL6 GAL3ST1-201ENST00000338911 1782 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
HDAC5Q9UQL6 UBFD1-201ENST00000395878 5110 ntAPPRIS P2 TSL 2 BASIC21.79■■□□□ 1.08
HDAC5Q9UQL6 SLCO6A1-202ENST00000389019 2340 ntTSL 1 (best) BASIC21.79■■□□□ 1.08
HDAC5Q9UQL6 IL17RC-206ENST00000416074 2342 ntAPPRIS ALT2 TSL 1 (best) BASIC21.79■■□□□ 1.08
HDAC5Q9UQL6 ZNF419-205ENST00000424930 2323 ntAPPRIS ALT2 TSL 1 (best) BASIC21.79■■□□□ 1.08
HDAC5Q9UQL6 TRIL-201ENST00000539664 4935 ntAPPRIS P1 BASIC21.79■■□□□ 1.08
HDAC5Q9UQL6 YIPF2-204ENST00000586748 1550 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
HDAC5Q9UQL6 CHAC1-204ENST00000617768 1560 ntTSL 1 (best) BASIC21.79■■□□□ 1.08
HDAC5Q9UQL6 WDR13-201ENST00000218056 2124 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
HDAC5Q9UQL6 LINC01097-201ENST00000627163 2122 ntTSL 2 BASIC21.79■■□□□ 1.08
HDAC5Q9UQL6 DIAPH2-205ENST00000373061 4983 ntAPPRIS ALT2 TSL 5 BASIC21.79■■□□□ 1.08
HDAC5Q9UQL6 SYNGR2-206ENST00000589711 2041 ntTSL 5 BASIC21.79■■□□□ 1.08
HDAC5Q9UQL6 ADORA1-202ENST00000337894 2919 ntAPPRIS P1 TSL 2 BASIC21.79■■□□□ 1.08
HDAC5Q9UQL6 NDUFB9-201ENST00000276689 711 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
HDAC5Q9UQL6 CUTA-210ENST00000488034 769 ntAPPRIS ALT1 TSL 2 BASIC21.79■■□□□ 1.08
HDAC5Q9UQL6 AMACR-208ENST00000512079 858 ntTSL 1 (best) BASIC21.79■■□□□ 1.08
HDAC5Q9UQL6 TUBA1A-203ENST00000546918 984 ntTSL 3 BASIC21.79■■□□□ 1.08
HDAC5Q9UQL6 PSME1-205ENST00000559123 1033 ntTSL 5 BASIC21.79■■□□□ 1.08
HDAC5Q9UQL6 YPEL3-209ENST00000566595 796 ntAPPRIS P1 TSL 2 BASIC21.79■■□□□ 1.08
HDAC5Q9UQL6 AC025062.2-201ENST00000605477 670 ntBASIC21.79■■□□□ 1.08
HDAC5Q9UQL6 AC104809.2-201ENST00000418218 2274 ntTSL 1 (best) BASIC21.79■■□□□ 1.08
HDAC5Q9UQL6 TRIM17-204ENST00000366698 1748 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
Retrieved 100 of 98,524 protein–RNA pairs in 25.6 ms