Protein–RNA interactions for Protein: Q9ULT6

ZNRF3, E3 ubiquitin-protein ligase ZNRF3, humanhuman

Predictions only

Length 936 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNRF3Q9ULT6 DMWD-201ENST00000270223 3305 ntAPPRIS P2 TSL 1 (best) BASIC20.84■□□□□ 0.93
ZNRF3Q9ULT6 TMEM8A-204ENST00000431232 3691 ntAPPRIS P2 TSL 1 (best) BASIC20.84■□□□□ 0.93
ZNRF3Q9ULT6 ATP6AP2-214ENST00000636287 1904 ntAPPRIS ALT2 TSL 5 BASIC20.84■□□□□ 0.93
ZNRF3Q9ULT6 MEN1-205ENST00000377316 2868 ntTSL 5 BASIC20.84■□□□□ 0.93
ZNRF3Q9ULT6 UBTF-203ENST00000393606 2683 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
ZNRF3Q9ULT6 HLA-F-218ENST00000376861 1544 ntAPPRIS ALT2 BASIC20.84■□□□□ 0.93
ZNRF3Q9ULT6 WDR45-234ENST00000634838 1545 ntTSL 5 BASIC20.84■□□□□ 0.93
ZNRF3Q9ULT6 AC099508.1-201ENST00000499110 1666 ntTSL 4 BASIC20.84■□□□□ 0.93
ZNRF3Q9ULT6 BRSK2-201ENST00000308219 4089 ntAPPRIS P3 TSL 1 (best) BASIC20.84■□□□□ 0.93
ZNRF3Q9ULT6 CAV2-201ENST00000222693 3301 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
ZNRF3Q9ULT6 GYG1-214ENST00000627418 1831 ntTSL 5 BASIC20.84■□□□□ 0.93
ZNRF3Q9ULT6 LST1-202ENST00000303757 604 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
ZNRF3Q9ULT6 CKS1B-202ENST00000368436 820 ntTSL 2 BASIC20.84■□□□□ 0.93
ZNRF3Q9ULT6 VMA21-202ENST00000370361 693 ntTSL 5 BASIC20.84■□□□□ 0.93
ZNRF3Q9ULT6 AC107890.1-201ENST00000422478 521 ntBASIC20.84■□□□□ 0.93
ZNRF3Q9ULT6 HNRNPA1P40-201ENST00000426371 1278 ntBASIC20.84■□□□□ 0.93
ZNRF3Q9ULT6 FXYD1-202ENST00000455515 594 ntAPPRIS P1 TSL 2 BASIC20.84■□□□□ 0.93
ZNRF3Q9ULT6 THTPA-204ENST00000554970 569 ntTSL 4 BASIC20.84■□□□□ 0.93
ZNRF3Q9ULT6 THTPA-206ENST00000556015 535 ntTSL 3 BASIC20.84■□□□□ 0.93
ZNRF3Q9ULT6 AC005225.4-201ENST00000557330 545 ntBASIC20.84■□□□□ 0.93
ZNRF3Q9ULT6 DUX4L17-201ENST00000557360 1267 ntBASIC20.84■□□□□ 0.93
ZNRF3Q9ULT6 RARRES2P8-201ENST00000566335 367 ntBASIC20.84■□□□□ 0.93
ZNRF3Q9ULT6 AC104985.1-201ENST00000587528 507 ntTSL 3 BASIC20.84■□□□□ 0.93
ZNRF3Q9ULT6 TIMM13-202ENST00000591871 631 ntTSL 5 BASIC20.84■□□□□ 0.93
ZNRF3Q9ULT6 CRTAC1-203ENST00000370597 2890 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
ZNRF3Q9ULT6 LGMN-216ENST00000557434 1797 ntTSL 5 BASIC20.84■□□□□ 0.93
ZNRF3Q9ULT6 TNFRSF13B-201ENST00000261652 1357 ntAPPRIS P2 TSL 1 (best) BASIC20.84■□□□□ 0.93
ZNRF3Q9ULT6 RNH1-201ENST00000354420 1894 ntAPPRIS P1 TSL 5 BASIC20.84■□□□□ 0.93
ZNRF3Q9ULT6 HPCAL1-206ENST00000613496 1547 ntAPPRIS P1 TSL 3 BASIC20.83■□□□□ 0.93
ZNRF3Q9ULT6 SKOR2-202ENST00000425639 3899 ntAPPRIS ALT2 TSL 5 BASIC20.83■□□□□ 0.93
ZNRF3Q9ULT6 GRM5-201ENST00000305432 4475 ntAPPRIS P3 TSL 1 (best) BASIC20.83■□□□□ 0.93
ZNRF3Q9ULT6 CARNS1-205ENST00000531040 2968 ntTSL 5 BASIC20.83■□□□□ 0.93
ZNRF3Q9ULT6 BTNL9-202ENST00000376841 1626 ntTSL 1 (best) BASIC20.83■□□□□ 0.93
ZNRF3Q9ULT6 PRSS36-202ENST00000418068 2446 ntTSL 2 BASIC20.83■□□□□ 0.93
ZNRF3Q9ULT6 RBPMS2P1-201ENST00000437762 623 ntBASIC20.83■□□□□ 0.93
ZNRF3Q9ULT6 UGT1A2P-201ENST00000454886 866 ntBASIC20.83■□□□□ 0.93
ZNRF3Q9ULT6 AC107918.2-201ENST00000530817 355 ntBASIC20.83■□□□□ 0.93
ZNRF3Q9ULT6 RNF24-204ENST00000545616 1128 ntTSL 1 (best) BASIC20.83■□□□□ 0.93
ZNRF3Q9ULT6 FAM177A1-207ENST00000554052 540 ntAPPRIS ALT2 TSL 2 BASIC20.83■□□□□ 0.93
ZNRF3Q9ULT6 ZNF710-AS1-201ENST00000558334 1168 ntTSL 1 (best) BASIC20.83■□□□□ 0.93
ZNRF3Q9ULT6 INO80E-210ENST00000567705 880 ntTSL 3 BASIC20.83■□□□□ 0.93
ZNRF3Q9ULT6 AC010336.3-201ENST00000597156 667 ntTSL 2 BASIC20.83■□□□□ 0.93
ZNRF3Q9ULT6 TMEM79-203ENST00000405535 2201 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
ZNRF3Q9ULT6 LINC00683-201ENST00000578803 2221 ntTSL 2 BASIC20.83■□□□□ 0.93
ZNRF3Q9ULT6 ANGPTL4-202ENST00000393962 1705 ntTSL 5 BASIC20.83■□□□□ 0.92
ZNRF3Q9ULT6 ELL-203ENST00000596124 1852 ntTSL 1 (best) BASIC20.83■□□□□ 0.92
ZNRF3Q9ULT6 SOD2-206ENST00000452684 2045 ntTSL 1 (best) BASIC20.83■□□□□ 0.92
ZNRF3Q9ULT6 DISC1-215ENST00000602281 2761 ntAPPRIS ALT2 TSL 1 (best) BASIC20.83■□□□□ 0.92
ZNRF3Q9ULT6 GALNT8-202ENST00000433855 5977 ntTSL 2 BASIC20.83■□□□□ 0.92
ZNRF3Q9ULT6 GRM5-202ENST00000305447 4571 ntAPPRIS ALT2 TSL 1 (best) BASIC20.83■□□□□ 0.92
ZNRF3Q9ULT6 NODAL-201ENST00000287139 1665 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
ZNRF3Q9ULT6 RNF32-201ENST00000311822 1842 ntTSL 1 (best) BASIC20.83■□□□□ 0.92
ZNRF3Q9ULT6 LGI3-202ENST00000424267 3114 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
ZNRF3Q9ULT6 SPERT-201ENST00000310521 1613 ntAPPRIS P3 TSL 1 (best) BASIC20.82■□□□□ 0.92
ZNRF3Q9ULT6 CLN3-229ENST00000567963 1452 ntTSL 5 BASIC20.82■□□□□ 0.92
ZNRF3Q9ULT6 ZDHHC19-201ENST00000296326 1306 ntAPPRIS P1 TSL 5 BASIC20.82■□□□□ 0.92
ZNRF3Q9ULT6 TRIP6-209ENST00000619988 1303 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
ZNRF3Q9ULT6 DBN1-201ENST00000292385 3072 ntAPPRIS P4 TSL 1 (best) BASIC20.82■□□□□ 0.92
ZNRF3Q9ULT6 RAB37-208ENST00000402449 1560 ntAPPRIS P3 TSL 2 BASIC20.82■□□□□ 0.92
ZNRF3Q9ULT6 ATP6V0E1-203ENST00000519374 1433 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
ZNRF3Q9ULT6 TEPSIN-201ENST00000300714 2287 ntAPPRIS P2 TSL 1 (best) BASIC20.82■□□□□ 0.92
ZNRF3Q9ULT6 AP000997.3-201ENST00000623333 2250 ntBASIC20.82■□□□□ 0.92
ZNRF3Q9ULT6 CABP2-201ENST00000294288 925 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
ZNRF3Q9ULT6 ZNF524-201ENST00000301073 1102 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
ZNRF3Q9ULT6 BX276092.7-202ENST00000422194 696 ntTSL 3 BASIC20.82■□□□□ 0.92
ZNRF3Q9ULT6 AL513327.2-201ENST00000432703 490 ntTSL 2 BASIC20.82■□□□□ 0.92
ZNRF3Q9ULT6 CCDC74BP1-201ENST00000508880 1123 ntBASIC20.82■□□□□ 0.92
ZNRF3Q9ULT6 AC106795.3-201ENST00000511650 547 ntTSL 4 BASIC20.82■□□□□ 0.92
ZNRF3Q9ULT6 AC067852.1-201ENST00000585572 594 ntTSL 4 BASIC20.82■□□□□ 0.92
ZNRF3Q9ULT6 TRAPPC6A-202ENST00000585934 758 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
ZNRF3Q9ULT6 GMFG-207ENST00000598034 1028 ntAPPRIS ALT1 TSL 1 (best) BASIC20.82■□□□□ 0.92
ZNRF3Q9ULT6 SAMD11-210ENST00000616016 2391 ntTSL 5 BASIC20.82■□□□□ 0.92
ZNRF3Q9ULT6 SAMD11-215ENST00000618779 2368 ntAPPRIS ALT2 TSL 5 BASIC20.82■□□□□ 0.92
ZNRF3Q9ULT6 IL17RE-206ENST00000454190 2757 ntTSL 2 BASIC20.82■□□□□ 0.92
ZNRF3Q9ULT6 LRRC4B-201ENST00000389201 2958 ntAPPRIS P1 TSL 2 BASIC20.82■□□□□ 0.92
ZNRF3Q9ULT6 PROB1-201ENST00000434752 5122 ntAPPRIS P1 BASIC20.82■□□□□ 0.92
ZNRF3Q9ULT6 PPP1R3F-202ENST00000376188 2443 ntTSL 2 BASIC20.82■□□□□ 0.92
ZNRF3Q9ULT6 NPM2-209ENST00000521157 1484 ntAPPRIS P2 TSL 5 BASIC20.81■□□□□ 0.92
ZNRF3Q9ULT6 FDXR-203ENST00000420580 1705 ntTSL 2 BASIC20.81■□□□□ 0.92
ZNRF3Q9ULT6 TCF7-201ENST00000342854 3045 ntAPPRIS P2 TSL 1 (best) BASIC20.81■□□□□ 0.92
ZNRF3Q9ULT6 ZBTB7A-201ENST00000322357 5422 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
ZNRF3Q9ULT6 CLPP-201ENST00000245816 1155 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
ZNRF3Q9ULT6 WRB-204ENST00000398753 699 ntTSL 3 BASIC20.81■□□□□ 0.92
ZNRF3Q9ULT6 SPCS2P4-201ENST00000436160 681 ntBASIC20.81■□□□□ 0.92
ZNRF3Q9ULT6 AC125807.1-201ENST00000483097 614 ntBASIC20.81■□□□□ 0.92
ZNRF3Q9ULT6 WASHC3-213ENST00000545679 865 ntTSL 2 BASIC20.81■□□□□ 0.92
ZNRF3Q9ULT6 AC009053.3-201ENST00000567148 574 ntTSL 4 BASIC20.81■□□□□ 0.92
ZNRF3Q9ULT6 CD7-202ENST00000578509 925 ntTSL 3 BASIC20.81■□□□□ 0.92
ZNRF3Q9ULT6 MIR4515-201ENST00000584082 81 ntBASIC20.81■□□□□ 0.92
ZNRF3Q9ULT6 RBP1-207ENST00000619087 516 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
ZNRF3Q9ULT6 HIST1H3D-202ENST00000635200 948 ntAPPRIS P1 TSL 3 BASIC20.81■□□□□ 0.92
ZNRF3Q9ULT6 SERPINB6-208ENST00000616722 2047 ntTSL 2 BASIC20.81■□□□□ 0.92
ZNRF3Q9ULT6 FO538757.1-201ENST00000623083 1397 ntBASIC20.81■□□□□ 0.92
ZNRF3Q9ULT6 MAML1-201ENST00000292599 5723 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
ZNRF3Q9ULT6 HPSE-207ENST00000513463 1458 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
ZNRF3Q9ULT6 HGNC:18790-211ENST00000621129 1483 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
ZNRF3Q9ULT6 CCDC43-201ENST00000315286 2082 ntAPPRIS P2 TSL 1 (best) BASIC20.81■□□□□ 0.92
ZNRF3Q9ULT6 TGFBR1-201ENST00000374990 5720 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
ZNRF3Q9ULT6 NAT6-205ENST00000443842 1820 ntAPPRIS ALT2 TSL 2 BASIC20.81■□□□□ 0.92
ZNRF3Q9ULT6 IGFBP3-210ENST00000613132 2412 ntTSL 5 BASIC20.8■□□□□ 0.92
Retrieved 100 of 98,524 protein–RNA pairs in 34.7 ms