Protein–RNA interactions for Protein: Q9UKZ1

CNOT11, CCR4-NOT transcription complex subunit 11, humanhuman

Known RBP Predictions only

Length 510 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT11Q9UKZ1 SDF4-201ENST00000263741 2079 ntAPPRIS P3 TSL 1 (best) BASIC16.83■□□□□ 0.28
CNOT11Q9UKZ1 ECSIT-202ENST00000270517 1700 ntAPPRIS P3 TSL 1 (best) BASIC16.83■□□□□ 0.28
CNOT11Q9UKZ1 KCNE3-201ENST00000310128 3143 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
CNOT11Q9UKZ1 PTGDR2-201ENST00000332539 2895 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
CNOT11Q9UKZ1 APBB1IP-201ENST00000356785 1513 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
CNOT11Q9UKZ1 CTTN-203ENST00000376561 2247 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
CNOT11Q9UKZ1 TRIM39-201ENST00000376656 3338 ntAPPRIS P4 TSL 2 BASIC16.83■□□□□ 0.28
CNOT11Q9UKZ1 ALG3-201ENST00000397676 1528 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
CNOT11Q9UKZ1 GOLGA7-202ENST00000405786 1903 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
CNOT11Q9UKZ1 RNF216P1-205ENST00000406089 807 ntTSL 5 BASIC16.83■□□□□ 0.28
CNOT11Q9UKZ1 SDHAP2-201ENST00000455183 2001 ntBASIC16.83■□□□□ 0.28
CNOT11Q9UKZ1 BAP1-202ENST00000460680 3937 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
CNOT11Q9UKZ1 CNP-204ENST00000472031 1019 ntTSL 2 BASIC16.83■□□□□ 0.28
CNOT11Q9UKZ1 LETM2-205ENST00000519476 2240 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
CNOT11Q9UKZ1 ABCD4-228ENST00000557588 763 ntTSL 3 BASIC16.83■□□□□ 0.28
CNOT11Q9UKZ1 AC027682.5-201ENST00000567122 530 ntTSL 3 BASIC16.83■□□□□ 0.28
CNOT11Q9UKZ1 CLDN7-204ENST00000571881 735 ntTSL 3 BASIC16.83■□□□□ 0.28
CNOT11Q9UKZ1 MCRIP1-206ENST00000573478 1123 ntTSL 2 BASIC16.83■□□□□ 0.28
CNOT11Q9UKZ1 NDUFV2-AS1-203ENST00000608008 779 ntBASIC16.83■□□□□ 0.28
CNOT11Q9UKZ1 NAP1L4-222ENST00000620138 2479 ntTSL 2 BASIC16.83■□□□□ 0.28
CNOT11Q9UKZ1 CD24-206ENST00000620405 586 ntAPPRIS ALT2 TSL 2 BASIC16.83■□□□□ 0.28
CNOT11Q9UKZ1 AC064853.5-201ENST00000641976 258 ntAPPRIS P1 BASIC16.83■□□□□ 0.28
CNOT11Q9UKZ1 ELF2-204ENST00000394235 4012 ntAPPRIS P1 TSL 5 BASIC16.83■□□□□ 0.28
CNOT11Q9UKZ1 CNTNAP3B-201ENST00000276974 3240 ntTSL 5 BASIC16.83■□□□□ 0.28
CNOT11Q9UKZ1 C12orf29-201ENST00000356891 2919 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
CNOT11Q9UKZ1 DVL1-202ENST00000378891 2926 ntAPPRIS P3 TSL 1 (best) BASIC16.83■□□□□ 0.28
CNOT11Q9UKZ1 EIF4H-201ENST00000265753 2679 ntAPPRIS P4 TSL 2 BASIC16.83■□□□□ 0.28
CNOT11Q9UKZ1 ABCF3-203ENST00000429586 2624 ntAPPRIS P2 TSL 1 (best) BASIC16.83■□□□□ 0.28
CNOT11Q9UKZ1 PPP2R2B-206ENST00000453001 2569 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
CNOT11Q9UKZ1 GLOD4-203ENST00000536578 2497 ntTSL 5 BASIC16.82■□□□□ 0.28
CNOT11Q9UKZ1 PRR5-203ENST00000403581 2279 ntTSL 2 BASIC16.82■□□□□ 0.28
CNOT11Q9UKZ1 CEP76-202ENST00000423709 2197 ntTSL 2 BASIC16.82■□□□□ 0.28
CNOT11Q9UKZ1 MAGEA2-208ENST00000623438 2009 ntAPPRIS P1 TSL 2 BASIC16.82■□□□□ 0.28
CNOT11Q9UKZ1 POM121C-208ENST00000615331 5835 ntAPPRIS P2 TSL 1 (best) BASIC16.82■□□□□ 0.28
CNOT11Q9UKZ1 HYAL3-201ENST00000336307 1942 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
CNOT11Q9UKZ1 EIF2B4-210ENST00000493344 1949 ntTSL 5 BASIC16.82■□□□□ 0.28
CNOT11Q9UKZ1 COL4A3BP-203ENST00000380494 5651 ntTSL 2 BASIC16.82■□□□□ 0.28
CNOT11Q9UKZ1 PACRGL-203ENST00000444671 1720 ntTSL 2 BASIC16.82■□□□□ 0.28
CNOT11Q9UKZ1 FKBP3-201ENST00000216330 1684 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
CNOT11Q9UKZ1 GBA2-201ENST00000378088 1672 ntTSL 2 BASIC16.82■□□□□ 0.28
CNOT11Q9UKZ1 INF2-204ENST00000398337 1689 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
CNOT11Q9UKZ1 LTBP4-203ENST00000308370 4948 ntAPPRIS P4 TSL 1 (best) BASIC16.82■□□□□ 0.28
CNOT11Q9UKZ1 ARID3A-201ENST00000263620 5941 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
CNOT11Q9UKZ1 ACD-215ENST00000620761 1483 ntAPPRIS ALT2 TSL 1 (best) BASIC16.82■□□□□ 0.28
CNOT11Q9UKZ1 WDR45-205ENST00000376358 1432 ntTSL 2 BASIC16.82■□□□□ 0.28
CNOT11Q9UKZ1 POU4F3-201ENST00000230732 1182 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
CNOT11Q9UKZ1 ZFAND2A-201ENST00000316495 860 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
CNOT11Q9UKZ1 NDUFA1-201ENST00000371437 766 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
CNOT11Q9UKZ1 ROMO1-205ENST00000397416 288 ntAPPRIS P1 TSL 3 BASIC16.82■□□□□ 0.28
CNOT11Q9UKZ1 ZFAND2A-203ENST00000401903 968 ntTSL 3 BASIC16.82■□□□□ 0.28
CNOT11Q9UKZ1 TMEM243-203ENST00000433078 1273 ntAPPRIS P1 TSL 2 BASIC16.82■□□□□ 0.28
CNOT11Q9UKZ1 RNF144A-AS1-205ENST00000439208 757 ntTSL 3 BASIC16.82■□□□□ 0.28
CNOT11Q9UKZ1 WDR6-223ENST00000627177 207 ntTSL 2 BASIC16.82■□□□□ 0.28
CNOT11Q9UKZ1 AC005906.2-206ENST00000638180 1029 ntTSL 5 BASIC16.82■□□□□ 0.28
CNOT11Q9UKZ1 DENND6B-201ENST00000413817 4939 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
CNOT11Q9UKZ1 CLIC5-202ENST00000339561 2390 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
CNOT11Q9UKZ1 ACSM2A-213ENST00000575690 2322 ntAPPRIS P1 TSL 2 BASIC16.82■□□□□ 0.28
CNOT11Q9UKZ1 DUSP4-201ENST00000240100 5537 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
CNOT11Q9UKZ1 CERS6-201ENST00000305747 7217 ntAPPRIS P3 TSL 2 BASIC16.82■□□□□ 0.28
CNOT11Q9UKZ1 FAM210B-201ENST00000371384 3046 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
CNOT11Q9UKZ1 SEPT9-202ENST00000423034 3984 ntAPPRIS ALT1 TSL 1 (best) BASIC16.82■□□□□ 0.28
CNOT11Q9UKZ1 SYBU-209ENST00000446070 2919 ntAPPRIS P4 TSL 1 (best) BASIC16.82■□□□□ 0.28
CNOT11Q9UKZ1 OCIAD1-204ENST00000425583 1915 ntTSL 3 BASIC16.82■□□□□ 0.28
CNOT11Q9UKZ1 SLC25A22-201ENST00000320230 2796 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
CNOT11Q9UKZ1 SUFU-201ENST00000369899 1839 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
CNOT11Q9UKZ1 SQOR-208ENST00000568606 1792 ntAPPRIS P1 TSL 5 BASIC16.82■□□□□ 0.28
CNOT11Q9UKZ1 PHRF1-205ENST00000533464 5218 ntAPPRIS ALT2 TSL 1 (best) BASIC16.82■□□□□ 0.28
CNOT11Q9UKZ1 WDR45B-201ENST00000392325 2587 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
CNOT11Q9UKZ1 CRTC3-201ENST00000268184 2537 ntAPPRIS P3 TSL 1 (best) BASIC16.81■□□□□ 0.28
CNOT11Q9UKZ1 MGLL-204ENST00000434178 4941 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
CNOT11Q9UKZ1 EPB41-205ENST00000373797 2402 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
CNOT11Q9UKZ1 FSCN2-201ENST00000334850 1551 ntTSL 5 BASIC16.81■□□□□ 0.28
CNOT11Q9UKZ1 UROS-202ENST00000368778 1556 ntTSL 2 BASIC16.81■□□□□ 0.28
CNOT11Q9UKZ1 FCGRT-202ENST00000426395 1559 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
CNOT11Q9UKZ1 NOMO1-208ENST00000620755 3921 ntAPPRIS ALT2 TSL 1 (best) BASIC16.81■□□□□ 0.28
CNOT11Q9UKZ1 MAP2K5-202ENST00000340972 1491 ntTSL 2 BASIC16.81■□□□□ 0.28
CNOT11Q9UKZ1 AC009102.3-201ENST00000623118 1491 ntBASIC16.81■□□□□ 0.28
CNOT11Q9UKZ1 ARSI-203ENST00000515301 1429 ntTSL 4 BASIC16.81■□□□□ 0.28
CNOT11Q9UKZ1 LCK-202ENST00000336890 2117 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
CNOT11Q9UKZ1 RAB15-203ENST00000533601 3515 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
CNOT11Q9UKZ1 ANKRD29-208ENST00000592179 3361 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
CNOT11Q9UKZ1 ABTB1-201ENST00000232744 1965 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
CNOT11Q9UKZ1 MYEF2-215ENST00000610570 2591 ntTSL 5 BASIC16.81■□□□□ 0.28
CNOT11Q9UKZ1 SYNM-204ENST00000594047 6407 ntAPPRIS ALT2 TSL 1 (best) BASIC16.81■□□□□ 0.28
CNOT11Q9UKZ1 C11orf49-204ENST00000395460 1916 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
CNOT11Q9UKZ1 SCT-201ENST00000176195 366 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
CNOT11Q9UKZ1 GUCA1B-201ENST00000230361 1113 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
CNOT11Q9UKZ1 TBC1D7-205ENST00000379307 1084 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
CNOT11Q9UKZ1 PLPP5-202ENST00000422581 853 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
CNOT11Q9UKZ1 UPK3BP1-201ENST00000428678 509 ntBASIC16.81■□□□□ 0.28
CNOT11Q9UKZ1 NT5C2-211ENST00000470299 249 ntTSL 5 BASIC16.81■□□□□ 0.28
CNOT11Q9UKZ1 ANKRD34C-AS1-201ENST00000557790 594 ntTSL 3 BASIC16.81■□□□□ 0.28
CNOT11Q9UKZ1 AC132938.3-201ENST00000579095 357 ntTSL 2 BASIC16.81■□□□□ 0.28
CNOT11Q9UKZ1 AC020558.2-201ENST00000582325 795 ntTSL 3 BASIC16.81■□□□□ 0.28
CNOT11Q9UKZ1 LITAF-220ENST00000620789 692 ntTSL 5 BASIC16.81■□□□□ 0.28
CNOT11Q9UKZ1 AL807752.6-202ENST00000622933 765 ntAPPRIS P5 TSL 3 BASIC16.81■□□□□ 0.28
CNOT11Q9UKZ1 TBC1D9B-220ENST00000630103 303 ntTSL 5 BASIC16.81■□□□□ 0.28
CNOT11Q9UKZ1 SPINK2-207ENST00000631082 392 ntTSL 5 BASIC16.81■□□□□ 0.28
CNOT11Q9UKZ1 CLN3-259ENST00000637551 1083 ntTSL 5 BASIC16.81■□□□□ 0.28
CNOT11Q9UKZ1 ARHGAP33-201ENST00000007510 2545 ntAPPRIS ALT2 TSL 5 BASIC16.81■□□□□ 0.28
Retrieved 100 of 98,524 protein–RNA pairs in 23.1 ms