Protein–RNA interactions for Protein: Q9UBQ0

VPS29, Vacuolar protein sorting-associated protein 29, humanhuman

Predictions only

Length 182 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS29Q9UBQ0 ZGLP1-202ENST00000403903 2303 ntAPPRIS P2 TSL 1 (best) BASIC16.78■□□□□ 0.28
VPS29Q9UBQ0 PCDHGC3-205ENST00000617641 2346 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
VPS29Q9UBQ0 PCDHA12-202ENST00000613593 2588 ntBASIC16.78■□□□□ 0.28
VPS29Q9UBQ0 NSMF-204ENST00000371473 3556 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
VPS29Q9UBQ0 PGLS-201ENST00000252603 1028 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
VPS29Q9UBQ0 RPS9-203ENST00000391752 772 ntAPPRIS P1 TSL 2 BASIC16.78■□□□□ 0.28
VPS29Q9UBQ0 FAM220CP-201ENST00000395253 831 ntBASIC16.78■□□□□ 0.28
VPS29Q9UBQ0 CLDN7-202ENST00000397317 1228 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
VPS29Q9UBQ0 AC004801.5-202ENST00000546804 530 ntTSL 4 BASIC16.78■□□□□ 0.28
VPS29Q9UBQ0 AL161669.1-201ENST00000559843 386 ntTSL 3 BASIC16.78■□□□□ 0.28
VPS29Q9UBQ0 AC116407.4-201ENST00000623319 1061 ntBASIC16.78■□□□□ 0.28
VPS29Q9UBQ0 KCNE1B-204ENST00000623803 811 ntAPPRIS P2 TSL 1 (best) BASIC16.78■□□□□ 0.28
VPS29Q9UBQ0 AL590326.2-201ENST00000625139 305 ntBASIC16.78■□□□□ 0.28
VPS29Q9UBQ0 RAB34-226ENST00000636772 1180 ntTSL 5 BASIC16.78■□□□□ 0.28
VPS29Q9UBQ0 TRAPPC11-201ENST00000334690 4552 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
VPS29Q9UBQ0 PODXL-201ENST00000322985 2011 ntAPPRIS ALT2 TSL 1 (best) BASIC16.78■□□□□ 0.28
VPS29Q9UBQ0 AD000864.1-201ENST00000624076 2295 ntBASIC16.78■□□□□ 0.28
VPS29Q9UBQ0 AC105411.1-202ENST00000565050 1476 ntTSL 5 BASIC16.78■□□□□ 0.28
VPS29Q9UBQ0 NLRP6-203ENST00000534750 2936 ntAPPRIS ALT2 TSL 2 BASIC16.78■□□□□ 0.28
VPS29Q9UBQ0 SLX1A-SULT1A3-202ENST00000565342 2195 ntTSL 2 BASIC16.78■□□□□ 0.28
VPS29Q9UBQ0 FAM234A-202ENST00000301679 1936 ntTSL 2 BASIC16.78■□□□□ 0.28
VPS29Q9UBQ0 PFDN6-206ENST00000463584 1915 ntTSL 3 BASIC16.78■□□□□ 0.28
VPS29Q9UBQ0 COQ8A-201ENST00000366777 2872 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
VPS29Q9UBQ0 MEF2A-204ENST00000557785 2854 ntAPPRIS ALT1 TSL 5 BASIC16.78■□□□□ 0.28
VPS29Q9UBQ0 AC116353.5-201ENST00000638148 1699 ntBASIC16.78■□□□□ 0.28
VPS29Q9UBQ0 INSIG1-203ENST00000344756 2623 ntTSL 5 BASIC16.78■□□□□ 0.28
VPS29Q9UBQ0 WDR13-202ENST00000376729 5469 ntAPPRIS P1 TSL 5 BASIC16.78■□□□□ 0.28
VPS29Q9UBQ0 TMEM106C-203ENST00000449758 1414 ntTSL 2 BASIC16.78■□□□□ 0.28
VPS29Q9UBQ0 CCDC112-205ENST00000506442 2145 ntAPPRIS ALT2 TSL 2 BASIC16.78■□□□□ 0.28
VPS29Q9UBQ0 TEAD2-204ENST00000593945 2141 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
VPS29Q9UBQ0 DDHD1-201ENST00000323669 5503 ntTSL 2 BASIC16.77■□□□□ 0.28
VPS29Q9UBQ0 COLEC11-206ENST00000403096 1557 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
VPS29Q9UBQ0 SLC10A3-202ENST00000369649 1763 ntAPPRIS ALT2 TSL 1 (best) BASIC16.77■□□□□ 0.28
VPS29Q9UBQ0 LGALS12-205ENST00000425950 1789 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
VPS29Q9UBQ0 FICD-204ENST00000552695 3347 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
VPS29Q9UBQ0 ETNK2-202ENST00000367201 2431 ntAPPRIS ALT2 TSL 2 BASIC16.77■□□□□ 0.28
VPS29Q9UBQ0 ROBO3-221ENST00000543966 1520 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
VPS29Q9UBQ0 ASIC3-201ENST00000297512 1718 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
VPS29Q9UBQ0 HSD17B10-201ENST00000168216 960 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
VPS29Q9UBQ0 SPIN2B-202ENST00000333933 1258 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
VPS29Q9UBQ0 KCNK7-202ENST00000342202 1283 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
VPS29Q9UBQ0 C1QC-201ENST00000374637 1089 ntAPPRIS P1 TSL 3 BASIC16.77■□□□□ 0.28
VPS29Q9UBQ0 PCAT7-201ENST00000452148 1164 ntTSL 2 BASIC16.77■□□□□ 0.28
VPS29Q9UBQ0 LINC00882-201ENST00000473636 710 ntTSL 3 BASIC16.77■□□□□ 0.28
VPS29Q9UBQ0 AC136604.3-201ENST00000508188 429 ntTSL 3 BASIC16.77■□□□□ 0.28
VPS29Q9UBQ0 AC010463.1-201ENST00000596542 1207 ntAPPRIS P1 TSL 2 BASIC16.77■□□□□ 0.28
VPS29Q9UBQ0 AC124016.1-202ENST00000609575 619 ntTSL 2 BASIC16.77■□□□□ 0.28
VPS29Q9UBQ0 BCL2L12-210ENST00000611631 1259 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
VPS29Q9UBQ0 KDM6A-213ENST00000611820 5924 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
VPS29Q9UBQ0 PTP4A1-201ENST00000370651 5088 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
VPS29Q9UBQ0 FCER2-202ENST00000360067 1482 ntAPPRIS ALT2 TSL 5 BASIC16.77■□□□□ 0.28
VPS29Q9UBQ0 ELAC2-202ENST00000395962 2924 ntTSL 2 BASIC16.77■□□□□ 0.27
VPS29Q9UBQ0 DNM2-201ENST00000355667 3541 ntTSL 1 (best) BASIC16.77■□□□□ 0.27
VPS29Q9UBQ0 UQCC3-202ENST00000531323 2288 ntAPPRIS P1 TSL 3 BASIC16.77■□□□□ 0.27
VPS29Q9UBQ0 KCNB1-203ENST00000635465 4114 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
VPS29Q9UBQ0 SH2D3C-205ENST00000420366 2682 ntTSL 2 BASIC16.77■□□□□ 0.27
VPS29Q9UBQ0 GXYLT2-201ENST00000389617 3260 ntAPPRIS P1 TSL 5 BASIC16.77■□□□□ 0.27
VPS29Q9UBQ0 AMMECR1-201ENST00000262844 5504 ntAPPRIS P3 TSL 1 (best) BASIC16.77■□□□□ 0.27
VPS29Q9UBQ0 MCTP2-205ENST00000543482 1422 ntTSL 2 BASIC16.77■□□□□ 0.27
VPS29Q9UBQ0 NRN1-201ENST00000244766 1624 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
VPS29Q9UBQ0 HPDL-201ENST00000334815 1629 ntAPPRIS P1 BASIC16.77■□□□□ 0.27
VPS29Q9UBQ0 P2RX5-209ENST00000552276 1642 ntAPPRIS ALT2 TSL 5 BASIC16.77■□□□□ 0.27
VPS29Q9UBQ0 SEH1L-202ENST00000399892 1846 ntTSL 1 (best) BASIC16.77■□□□□ 0.27
VPS29Q9UBQ0 MAPRE1-201ENST00000375571 2623 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
VPS29Q9UBQ0 DTX2-206ENST00000430490 2623 ntAPPRIS P3 TSL 1 (best) BASIC16.77■□□□□ 0.27
VPS29Q9UBQ0 ZBTB44-201ENST00000357899 2781 ntAPPRIS ALT2 TSL 1 (best) BASIC16.77■□□□□ 0.27
VPS29Q9UBQ0 FOSB-209ENST00000590335 2170 ntTSL 1 (best) BASIC16.77■□□□□ 0.27
VPS29Q9UBQ0 MYBPH-202ENST00000621380 1772 ntTSL 5 BASIC16.77■□□□□ 0.27
VPS29Q9UBQ0 YIPF2-204ENST00000586748 1550 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
VPS29Q9UBQ0 SLC7A9-202ENST00000587772 1568 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
VPS29Q9UBQ0 AL049757.1-201ENST00000616842 1596 ntBASIC16.77■□□□□ 0.27
VPS29Q9UBQ0 AC022211.2-201ENST00000585075 2527 ntBASIC16.76■□□□□ 0.27
VPS29Q9UBQ0 CACNA1A-201ENST00000360228 8627 ntAPPRIS P4 TSL 1 (best) BASIC16.76■□□□□ 0.27
VPS29Q9UBQ0 AKIRIN1-201ENST00000372984 1330 ntTSL 2 BASIC16.76■□□□□ 0.27
VPS29Q9UBQ0 CCT6P1-202ENST00000442266 1317 ntTSL 2 BASIC16.76■□□□□ 0.27
VPS29Q9UBQ0 KCNQ2-207ENST00000370224 3004 ntTSL 5 BASIC16.76■□□□□ 0.27
VPS29Q9UBQ0 C17orf62-203ENST00000434650 2050 ntTSL 2 BASIC16.76■□□□□ 0.27
VPS29Q9UBQ0 SEPT11-209ENST00000510515 1886 ntTSL 2 BASIC16.76■□□□□ 0.27
VPS29Q9UBQ0 AGBL5-202ENST00000360131 3177 ntAPPRIS P3 TSL 1 (best) BASIC16.76■□□□□ 0.27
VPS29Q9UBQ0 GNAI2-204ENST00000440628 1663 ntTSL 5 BASIC16.76■□□□□ 0.27
VPS29Q9UBQ0 ZNF668-201ENST00000300849 2762 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
VPS29Q9UBQ0 NFATC4-223ENST00000555802 1476 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
VPS29Q9UBQ0 ICAM3-205ENST00000589261 2024 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
VPS29Q9UBQ0 ZSCAN10-202ENST00000538082 2350 ntTSL 4 BASIC16.76■□□□□ 0.27
VPS29Q9UBQ0 AC009053.2-201ENST00000563701 2365 ntBASIC16.76■□□□□ 0.27
VPS29Q9UBQ0 SNRPA1-201ENST00000254193 1055 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
VPS29Q9UBQ0 NMRK1-202ENST00000376808 1121 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
VPS29Q9UBQ0 FAM239B-201ENST00000381106 1099 ntTSL 2 BASIC16.76■□□□□ 0.27
VPS29Q9UBQ0 RPS14-203ENST00000407193 784 ntAPPRIS P1 TSL 2 BASIC16.76■□□□□ 0.27
VPS29Q9UBQ0 C2orf82-202ENST00000409230 663 ntAPPRIS P2 TSL 3 BASIC16.76■□□□□ 0.27
VPS29Q9UBQ0 SSR4P1-202ENST00000429427 967 ntTSL 5 BASIC16.76■□□□□ 0.27
VPS29Q9UBQ0 DANCR-204ENST00000444958 709 ntTSL 3 BASIC16.76■□□□□ 0.27
VPS29Q9UBQ0 MEG3-211ENST00000452514 461 ntTSL 3 BASIC16.76■□□□□ 0.27
VPS29Q9UBQ0 AC009533.2-201ENST00000543664 586 ntBASIC16.76■□□□□ 0.27
VPS29Q9UBQ0 ATP6V0C-202ENST00000564973 1081 ntTSL 2 BASIC16.76■□□□□ 0.27
VPS29Q9UBQ0 AC111152.3-201ENST00000569699 673 ntBASIC16.76■□□□□ 0.27
VPS29Q9UBQ0 SHBG-211ENST00000574539 938 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
VPS29Q9UBQ0 AC016582.2-201ENST00000591908 446 ntTSL 3 BASIC16.76■□□□□ 0.27
VPS29Q9UBQ0 IGFLR1-209ENST00000592537 1195 ntAPPRIS P2 TSL 1 (best) BASIC16.76■□□□□ 0.27
VPS29Q9UBQ0 NTF4-201ENST00000593537 932 ntAPPRIS P1 BASIC16.76■□□□□ 0.27
Retrieved 100 of 98,524 protein–RNA pairs in 21.1 ms