Protein–RNA interactions for Protein: Q9UBD9

CLCF1, Cardiotrophin-like cytokine factor 1, humanhuman

Predictions only

Length 225 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLCF1Q9UBD9 TRIM36-203ENST00000379618 693 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
CLCF1Q9UBD9 BPHL-208ENST00000434640 1186 ntTSL 5 BASIC15.55■□□□□ 0.08
CLCF1Q9UBD9 AL807752.7-201ENST00000471521 989 ntAPPRIS P1 TSL 5 BASIC15.55■□□□□ 0.08
CLCF1Q9UBD9 ARTN-206ENST00000472435 402 ntTSL 3 BASIC15.55■□□□□ 0.08
CLCF1Q9UBD9 UNC93B6-202ENST00000528242 690 ntBASIC15.55■□□□□ 0.08
CLCF1Q9UBD9 TMEM106C-214ENST00000550161 976 ntTSL 3 BASIC15.55■□□□□ 0.08
CLCF1Q9UBD9 ARMC7-203ENST00000581078 1002 ntTSL 2 BASIC15.55■□□□□ 0.08
CLCF1Q9UBD9 AC099811.2-203ENST00000592574 958 ntAPPRIS P1 TSL 5 BASIC15.55■□□□□ 0.08
CLCF1Q9UBD9 PTCH1-201ENST00000331920 8057 ntAPPRIS P1 TSL 5 BASIC15.55■□□□□ 0.08
CLCF1Q9UBD9 USP48-204ENST00000400301 4309 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
CLCF1Q9UBD9 SOD2-215ENST00000546087 2558 ntTSL 2 BASIC15.55■□□□□ 0.08
CLCF1Q9UBD9 TAF6-211ENST00000453269 2464 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
CLCF1Q9UBD9 SLC44A3-201ENST00000271227 2388 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
CLCF1Q9UBD9 COBL-202ENST00000395540 2332 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
CLCF1Q9UBD9 SAMD11-212ENST00000617307 2314 ntAPPRIS ALT2 TSL 5 BASIC15.55■□□□□ 0.08
CLCF1Q9UBD9 STMN4-202ENST00000350889 2288 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
CLCF1Q9UBD9 FXYD6-204ENST00000526014 2171 ntAPPRIS P2 TSL 1 (best) BASIC15.55■□□□□ 0.08
CLCF1Q9UBD9 RIN1-205ENST00000530056 2122 ntTSL 2 BASIC15.55■□□□□ 0.08
CLCF1Q9UBD9 ADGRD2-201ENST00000334810 3244 ntAPPRIS P1 TSL 5 BASIC15.55■□□□□ 0.08
CLCF1Q9UBD9 ACTB-201ENST00000331789 1917 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
CLCF1Q9UBD9 NRXN1-220ENST00000611589 1857 ntTSL 5 BASIC15.54■□□□□ 0.08
CLCF1Q9UBD9 AP001626.1-201ENST00000424890 2854 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
CLCF1Q9UBD9 GCAT-202ENST00000323205 1656 ntTSL 2 BASIC15.54■□□□□ 0.08
CLCF1Q9UBD9 CDH24-205ENST00000554034 2759 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
CLCF1Q9UBD9 GATAD2A-202ENST00000360315 5671 ntAPPRIS P3 TSL 5 BASIC15.54■□□□□ 0.08
CLCF1Q9UBD9 MDFIC-201ENST00000257724 4598 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
CLCF1Q9UBD9 PSMA1-209ENST00000530457 1527 ntTSL 5 BASIC15.54■□□□□ 0.08
CLCF1Q9UBD9 HAPLN3-204ENST00000562889 1547 ntTSL 5 BASIC15.54■□□□□ 0.08
CLCF1Q9UBD9 HTRA3-201ENST00000307358 2541 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
CLCF1Q9UBD9 BCL11B-202ENST00000357195 7559 ntAPPRIS P4 TSL 1 (best) BASIC15.54■□□□□ 0.08
CLCF1Q9UBD9 C16orf58-202ENST00000430477 2471 ntAPPRIS P2 TSL 1 (best) BASIC15.54■□□□□ 0.08
CLCF1Q9UBD9 ZNF354C-201ENST00000315475 5411 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
CLCF1Q9UBD9 ST3GAL3-206ENST00000351035 2377 ntTSL 5 BASIC15.54■□□□□ 0.08
CLCF1Q9UBD9 CITED2-201ENST00000367651 2354 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
CLCF1Q9UBD9 SLCO4A1-AS1-202ENST00000433126 1420 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
CLCF1Q9UBD9 FOXP3-206ENST00000557224 1371 ntTSL 2 BASIC15.54■□□□□ 0.08
CLCF1Q9UBD9 SERPINE2-201ENST00000258405 2195 ntAPPRIS P3 TSL 1 (best) BASIC15.54■□□□□ 0.08
CLCF1Q9UBD9 TMEM128-202ENST00000382753 1221 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
CLCF1Q9UBD9 MSRB1-202ENST00000399753 847 ntTSL 3 BASIC15.54■□□□□ 0.08
CLCF1Q9UBD9 LBH-204ENST00000406087 559 ntTSL 4 BASIC15.54■□□□□ 0.08
CLCF1Q9UBD9 AC064807.1-202ENST00000423716 936 ntTSL 2 BASIC15.54■□□□□ 0.08
CLCF1Q9UBD9 SLC25A6P5-201ENST00000435663 894 ntBASIC15.54■□□□□ 0.08
CLCF1Q9UBD9 AC091182.1-202ENST00000518765 713 ntTSL 2 BASIC15.54■□□□□ 0.08
CLCF1Q9UBD9 IER2-202ENST00000587885 1291 ntAPPRIS P1 TSL 3 BASIC15.54■□□□□ 0.08
CLCF1Q9UBD9 MKNK2-212ENST00000591588 631 ntTSL 2 BASIC15.54■□□□□ 0.08
CLCF1Q9UBD9 AL139424.1-201ENST00000607572 797 ntBASIC15.54■□□□□ 0.08
CLCF1Q9UBD9 CCL3-204ENST00000613922 778 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
CLCF1Q9UBD9 HMGN3-203ENST00000620514 1010 ntTSL 3 BASIC15.54■□□□□ 0.08
CLCF1Q9UBD9 AC005593.1-201ENST00000624894 515 ntBASIC15.54■□□□□ 0.08
CLCF1Q9UBD9 CHD1L-204ENST00000431239 2907 ntTSL 5 BASIC15.54■□□□□ 0.08
CLCF1Q9UBD9 MSANTD1-201ENST00000438480 2922 ntAPPRIS P3 TSL 5 BASIC15.54■□□□□ 0.08
CLCF1Q9UBD9 HDAC10-202ENST00000349505 1950 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
CLCF1Q9UBD9 SCYL1-203ENST00000420247 2583 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
CLCF1Q9UBD9 ACAP3-202ENST00000354700 3896 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
CLCF1Q9UBD9 ELN-202ENST00000320399 2274 ntAPPRIS ALT2 TSL 5 BASIC15.54■□□□□ 0.08
CLCF1Q9UBD9 SIGIRR-201ENST00000332725 1639 ntAPPRIS P1 TSL 2 BASIC15.54■□□□□ 0.08
CLCF1Q9UBD9 GHRHR-205ENST00000409904 1613 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
CLCF1Q9UBD9 TNFRSF14-AS1-205ENST00000449660 1629 ntTSL 2 BASIC15.54■□□□□ 0.08
CLCF1Q9UBD9 DMAP1-201ENST00000315913 1552 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
CLCF1Q9UBD9 DAPK1-207ENST00000469640 5899 ntTSL 5 BASIC15.53■□□□□ 0.08
CLCF1Q9UBD9 GPER1-204ENST00000401670 1542 ntAPPRIS P1 TSL 2 BASIC15.53■□□□□ 0.08
CLCF1Q9UBD9 BAIAP2L2-202ENST00000381669 2146 ntAPPRIS P2 TSL 1 (best) BASIC15.53■□□□□ 0.08
CLCF1Q9UBD9 PEX5L-206ENST00000465751 2147 ntAPPRIS ALT2 TSL 2 BASIC15.53■□□□□ 0.08
CLCF1Q9UBD9 ENTPD6-209ENST00000433259 2654 ntTSL 5 BASIC15.53■□□□□ 0.08
CLCF1Q9UBD9 LUC7L-202ENST00000337351 2097 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
CLCF1Q9UBD9 WDR90-202ENST00000315764 1454 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
CLCF1Q9UBD9 ARF1-214ENST00000541182 2006 ntAPPRIS P1 TSL 2 BASIC15.53■□□□□ 0.08
CLCF1Q9UBD9 CYBA-210ENST00000569359 1415 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
CLCF1Q9UBD9 RAVER1-207ENST00000615032 1952 ntAPPRIS ALT2 TSL 5 BASIC15.53■□□□□ 0.08
CLCF1Q9UBD9 MAPT-205ENST00000351559 5811 ntAPPRIS ALT2 TSL 1 (best) BASIC15.53■□□□□ 0.08
CLCF1Q9UBD9 KDM6A-202ENST00000382899 5789 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
CLCF1Q9UBD9 ARSA-204ENST00000395621 1918 ntAPPRIS P1 TSL 2 BASIC15.53■□□□□ 0.08
CLCF1Q9UBD9 UNC5D-204ENST00000420357 2966 ntTSL 5 BASIC15.53■□□□□ 0.08
CLCF1Q9UBD9 C1orf159-205ENST00000421241 1841 ntAPPRIS P3 TSL 2 BASIC15.53■□□□□ 0.08
CLCF1Q9UBD9 SNN-201ENST00000329565 3312 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
CLCF1Q9UBD9 AP4S1-202ENST00000313566 839 ntTSL 3 BASIC15.53■□□□□ 0.08
CLCF1Q9UBD9 PDHA1-203ENST00000379805 734 ntTSL 2 BASIC15.53■□□□□ 0.08
CLCF1Q9UBD9 POLD2P1-201ENST00000511220 997 ntBASIC15.53■□□□□ 0.08
CLCF1Q9UBD9 TUBA1A-203ENST00000546918 984 ntTSL 3 BASIC15.53■□□□□ 0.08
CLCF1Q9UBD9 L2HGDH-205ENST00000555423 841 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
CLCF1Q9UBD9 BLOC1S6-202ENST00000562384 494 ntTSL 4 BASIC15.53■□□□□ 0.08
CLCF1Q9UBD9 NUBP2-214ENST00000568706 913 ntTSL 2 BASIC15.53■□□□□ 0.08
CLCF1Q9UBD9 ANAPC11-210ENST00000574924 722 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
CLCF1Q9UBD9 FBF1-204ENST00000586631 621 ntAPPRIS ALT2 TSL 2 BASIC15.53■□□□□ 0.08
CLCF1Q9UBD9 CAND2-206ENST00000626378 333 ntTSL 5 BASIC15.53■□□□□ 0.08
CLCF1Q9UBD9 AC105001.2-201ENST00000554914 1753 ntAPPRIS P1 TSL 2 BASIC15.53■□□□□ 0.08
CLCF1Q9UBD9 EEPD1-201ENST00000242108 4765 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
CLCF1Q9UBD9 PSRC1-204ENST00000369909 1742 ntAPPRIS P3 TSL 1 (best) BASIC15.53■□□□□ 0.08
CLCF1Q9UBD9 SLC27A2-202ENST00000380902 2181 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
CLCF1Q9UBD9 MIOX-202ENST00000395732 1658 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
CLCF1Q9UBD9 SGCE-206ENST00000445866 1666 ntTSL 5 BASIC15.53■□□□□ 0.08
CLCF1Q9UBD9 CDCA7L-203ENST00000406877 3066 ntAPPRIS P3 TSL 1 (best) BASIC15.53■□□□□ 0.08
CLCF1Q9UBD9 USP18-201ENST00000215794 2129 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
CLCF1Q9UBD9 PROSER1-201ENST00000352251 5168 ntAPPRIS P2 TSL 1 (best) BASIC15.53■□□□□ 0.08
CLCF1Q9UBD9 TRH-202ENST00000507066 1580 ntAPPRIS ALT1 TSL 5 BASIC15.53■□□□□ 0.08
CLCF1Q9UBD9 MAFF-206ENST00000538320 2458 ntAPPRIS P1 TSL 4 BASIC15.53■□□□□ 0.08
CLCF1Q9UBD9 AC006504.4-201ENST00000592118 1568 ntBASIC15.53■□□□□ 0.08
CLCF1Q9UBD9 SEMA6C-209ENST00000613223 1950 ntTSL 5 BASIC15.53■□□□□ 0.08
CLCF1Q9UBD9 GMPPA-204ENST00000373908 1501 ntAPPRIS P1 TSL 5 BASIC15.53■□□□□ 0.08
CLCF1Q9UBD9 DBNL-213ENST00000452943 1513 ntTSL 2 BASIC15.53■□□□□ 0.08
Retrieved 100 of 98,524 protein–RNA pairs in 39.5 ms