Protein–RNA interactions for Protein: Q9P1U1

ACTR3B, Actin-related protein 3B, humanhuman

Predictions only

Length 418 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ACTR3BQ9P1U1 TMEM191C-214ENST00000621561 1337 ntAPPRIS P2 TSL 5 BASIC16.48■□□□□ 0.23
ACTR3BQ9P1U1 TMEM132E-201ENST00000321639 5631 ntAPPRIS ALT2 TSL 5 BASIC16.48■□□□□ 0.23
ACTR3BQ9P1U1 PI4KAP1-201ENST00000610959 2425 ntTSL 2 BASIC16.48■□□□□ 0.23
ACTR3BQ9P1U1 CTSO-201ENST00000433477 2954 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
ACTR3BQ9P1U1 STIM2-203ENST00000467011 3925 ntAPPRIS ALT2 TSL 1 (best) BASIC16.48■□□□□ 0.23
ACTR3BQ9P1U1 IPMK-201ENST00000373935 6133 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
ACTR3BQ9P1U1 AC092171.3-201ENST00000610122 2651 ntBASIC16.48■□□□□ 0.23
ACTR3BQ9P1U1 SMCHD1-201ENST00000320876 8821 ntAPPRIS P1 TSL 5 BASIC16.48■□□□□ 0.23
ACTR3BQ9P1U1 MARCH1-203ENST00000503008 5877 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
ACTR3BQ9P1U1 SCP2-204ENST00000407246 2239 ntTSL 2 BASIC16.48■□□□□ 0.23
ACTR3BQ9P1U1 BID-202ENST00000342111 854 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
ACTR3BQ9P1U1 MCHR1-202ENST00000381433 1219 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
ACTR3BQ9P1U1 PENK-204ENST00000518770 863 ntTSL 2 BASIC16.48■□□□□ 0.23
ACTR3BQ9P1U1 PHB2-207ENST00000542912 1138 ntTSL 5 BASIC16.48■□□□□ 0.23
ACTR3BQ9P1U1 MRPL52-210ENST00000555345 895 ntTSL 2 BASIC16.48■□□□□ 0.23
ACTR3BQ9P1U1 IRX5-204ENST00000560154 879 ntTSL 5 BASIC16.48■□□□□ 0.23
ACTR3BQ9P1U1 LINC02167-201ENST00000562769 594 ntTSL 3 BASIC16.48■□□□□ 0.23
ACTR3BQ9P1U1 AC015961.2-201ENST00000589281 701 ntTSL 3 BASIC16.48■□□□□ 0.23
ACTR3BQ9P1U1 IRX5-205ENST00000620085 881 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
ACTR3BQ9P1U1 RAP1GDS1-201ENST00000264572 1686 ntTSL 5 BASIC16.48■□□□□ 0.23
ACTR3BQ9P1U1 FAM178B-204ENST00000490605 2710 ntAPPRIS ALT2 TSL 5 BASIC16.48■□□□□ 0.23
ACTR3BQ9P1U1 RDH13-223ENST00000610356 1931 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
ACTR3BQ9P1U1 SLC35E2B-204ENST00000614300 2156 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
ACTR3BQ9P1U1 REPS2-201ENST00000303843 7771 ntAPPRIS ALT2 TSL 1 (best) BASIC16.48■□□□□ 0.23
ACTR3BQ9P1U1 HGNC:18790-203ENST00000433139 2254 ntAPPRIS P1 TSL 2 BASIC16.48■□□□□ 0.23
ACTR3BQ9P1U1 RUNX2-201ENST00000359524 5390 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
ACTR3BQ9P1U1 OSBPL1A-203ENST00000399441 1887 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
ACTR3BQ9P1U1 MAP2K7-202ENST00000397981 3430 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
ACTR3BQ9P1U1 AC008741.2-201ENST00000612792 3115 ntBASIC16.48■□□□□ 0.23
ACTR3BQ9P1U1 ARHGEF28-214ENST00000545377 6351 ntAPPRIS P3 TSL 5 BASIC16.47■□□□□ 0.23
ACTR3BQ9P1U1 CIRBP-201ENST00000320936 1328 ntAPPRIS P3 TSL 1 (best) BASIC16.47■□□□□ 0.23
ACTR3BQ9P1U1 CIRBP-207ENST00000586472 1303 ntAPPRIS P3 TSL 3 BASIC16.47■□□□□ 0.23
ACTR3BQ9P1U1 YIPF2-204ENST00000586748 1550 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
ACTR3BQ9P1U1 C20orf166-AS1-201ENST00000412495 2302 ntTSL 2 BASIC16.47■□□□□ 0.23
ACTR3BQ9P1U1 GTPBP3-201ENST00000324894 2579 ntAPPRIS ALT2 TSL 1 (best) BASIC16.47■□□□□ 0.23
ACTR3BQ9P1U1 MYEF2-215ENST00000610570 2591 ntTSL 5 BASIC16.47■□□□□ 0.23
ACTR3BQ9P1U1 MAPT-205ENST00000351559 5811 ntAPPRIS ALT2 TSL 1 (best) BASIC16.47■□□□□ 0.23
ACTR3BQ9P1U1 AGFG1-201ENST00000310078 8668 ntAPPRIS P3 TSL 1 (best) BASIC16.47■□□□□ 0.23
ACTR3BQ9P1U1 MAP3K7CL-206ENST00000399928 1904 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
ACTR3BQ9P1U1 KRT8P9-201ENST00000558927 1449 ntBASIC16.47■□□□□ 0.23
ACTR3BQ9P1U1 SIN3B-206ENST00000595541 2767 ntTSL 2 BASIC16.47■□□□□ 0.23
ACTR3BQ9P1U1 RECQL4-210ENST00000621189 3896 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
ACTR3BQ9P1U1 SENP1-204ENST00000549518 2260 ntAPPRIS P2 TSL 1 (best) BASIC16.47■□□□□ 0.23
ACTR3BQ9P1U1 RNF31-201ENST00000324103 3627 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
ACTR3BQ9P1U1 STK32C-204ENST00000368622 2010 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
ACTR3BQ9P1U1 ATP6V0E2-201ENST00000421974 2605 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
ACTR3BQ9P1U1 AFG3L2-201ENST00000269143 3247 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
ACTR3BQ9P1U1 HECTD2-204ENST00000446394 4939 ntTSL 2 BASIC16.47■□□□□ 0.23
ACTR3BQ9P1U1 AIF1L-203ENST00000372298 849 ntTSL 3 BASIC16.47■□□□□ 0.23
ACTR3BQ9P1U1 GAD2-202ENST00000376248 680 ntTSL 5 BASIC16.47■□□□□ 0.23
ACTR3BQ9P1U1 NUDT8-202ENST00000376693 728 ntAPPRIS ALT2 TSL 2 BASIC16.47■□□□□ 0.23
ACTR3BQ9P1U1 AL162457.2-201ENST00000447909 937 ntTSL 3 BASIC16.47■□□□□ 0.23
ACTR3BQ9P1U1 MRPL2-207ENST00000487429 905 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
ACTR3BQ9P1U1 RPL26L1-205ENST00000519974 695 ntAPPRIS P1 TSL 3 BASIC16.47■□□□□ 0.23
ACTR3BQ9P1U1 PSMD9-208ENST00000542602 516 ntTSL 3 BASIC16.47■□□□□ 0.23
ACTR3BQ9P1U1 PSMC3IP-208ENST00000590760 664 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
ACTR3BQ9P1U1 FFAR4-203ENST00000604414 1142 ntTSL 3 BASIC16.47■□□□□ 0.23
ACTR3BQ9P1U1 AC026471.5-201ENST00000615068 467 ntBASIC16.47■□□□□ 0.23
ACTR3BQ9P1U1 GLDC-201ENST00000321612 3900 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
ACTR3BQ9P1U1 CASKIN2-205ENST00000581870 1612 ntTSL 2 BASIC16.47■□□□□ 0.23
ACTR3BQ9P1U1 ZSCAN2-214ENST00000546148 2242 ntAPPRIS P2 TSL 2 BASIC16.47■□□□□ 0.23
ACTR3BQ9P1U1 DNAAF2-202ENST00000406043 2819 ntAPPRIS ALT2 TSL 1 (best) BASIC16.47■□□□□ 0.23
ACTR3BQ9P1U1 PHKA1-205ENST00000541944 5944 ntAPPRIS ALT1 TSL 1 (best) BASIC16.47■□□□□ 0.23
ACTR3BQ9P1U1 DUSP8-201ENST00000331588 4455 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
ACTR3BQ9P1U1 HOXC6-201ENST00000243108 1733 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
ACTR3BQ9P1U1 NECAB2-203ENST00000565691 2064 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
ACTR3BQ9P1U1 KLF10-202ENST00000395884 3659 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
ACTR3BQ9P1U1 GPER1-202ENST00000397088 2639 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
ACTR3BQ9P1U1 MYB-209ENST00000442647 3304 ntAPPRIS ALT1 TSL 1 (best) BASIC16.47■□□□□ 0.23
ACTR3BQ9P1U1 FLJ31104-201ENST00000500093 2289 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
ACTR3BQ9P1U1 SATB2-202ENST00000417098 5730 ntAPPRIS P1 TSL 2 BASIC16.46■□□□□ 0.23
ACTR3BQ9P1U1 BBC3-201ENST00000300880 1347 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
ACTR3BQ9P1U1 MYBPH-202ENST00000621380 1772 ntTSL 5 BASIC16.46■□□□□ 0.23
ACTR3BQ9P1U1 KHNYN-202ENST00000553935 3359 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
ACTR3BQ9P1U1 SLC35E2-201ENST00000246421 1430 ntAPPRIS P3 TSL 1 (best) BASIC16.46■□□□□ 0.23
ACTR3BQ9P1U1 GSTZ1-204ENST00000393734 1424 ntTSL 5 BASIC16.46■□□□□ 0.23
ACTR3BQ9P1U1 KLHDC4-227ENST00000622456 1422 ntTSL 5 BASIC16.46■□□□□ 0.23
ACTR3BQ9P1U1 MICALL2-201ENST00000297508 3121 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
ACTR3BQ9P1U1 SH3BP5-203ENST00000408919 1880 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
ACTR3BQ9P1U1 ZNF414-202ENST00000393927 2300 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
ACTR3BQ9P1U1 MCF2L-208ENST00000397030 6580 ntTSL 2 BASIC16.46■□□□□ 0.23
ACTR3BQ9P1U1 NOL4L-211ENST00000621426 6577 ntAPPRIS P2 TSL 5 BASIC16.46■□□□□ 0.23
ACTR3BQ9P1U1 VSX2-201ENST00000261980 2995 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
ACTR3BQ9P1U1 AC125494.1-203ENST00000396799 1622 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
ACTR3BQ9P1U1 MYH14-202ENST00000376970 6787 ntAPPRIS ALT2 TSL 5 BASIC16.46■□□□□ 0.23
ACTR3BQ9P1U1 CTPS2-201ENST00000359276 3629 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
ACTR3BQ9P1U1 NDUFA11-205ENST00000592634 2154 ntTSL 2 BASIC16.46■□□□□ 0.23
ACTR3BQ9P1U1 KLK6-202ENST00000376851 1708 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
ACTR3BQ9P1U1 SDCBP2-203ENST00000381808 1261 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
ACTR3BQ9P1U1 MPV17L-202ENST00000396385 1037 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
ACTR3BQ9P1U1 AC012618.2-201ENST00000428058 849 ntBASIC16.46■□□□□ 0.23
ACTR3BQ9P1U1 LEF1-AS1-201ENST00000436413 1045 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
ACTR3BQ9P1U1 DIO1-206ENST00000525202 558 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
ACTR3BQ9P1U1 PDXDC2P-202ENST00000527016 543 ntTSL 3 BASIC16.46■□□□□ 0.23
ACTR3BQ9P1U1 AC124947.2-201ENST00000547118 1133 ntBASIC16.46■□□□□ 0.23
ACTR3BQ9P1U1 AC005606.2-201ENST00000564438 614 ntTSL 2 BASIC16.46■□□□□ 0.23
ACTR3BQ9P1U1 SPAG7-207ENST00000575142 1094 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
ACTR3BQ9P1U1 TK1-204ENST00000590430 683 ntTSL 3 BASIC16.46■□□□□ 0.23
ACTR3BQ9P1U1 RAB11B-AS1-201ENST00000593581 1013 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
ACTR3BQ9P1U1 AL049637.2-201ENST00000641778 930 ntBASIC16.46■□□□□ 0.23
Retrieved 100 of 98,524 protein–RNA pairs in 22.5 ms