Protein–RNA interactions for Protein: Q9P003

CNIH4, Protein cornichon homolog 4, humanhuman

Predictions only

Length 139 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNIH4Q9P003 PTDSS1-202ENST00000517309 5177 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
CNIH4Q9P003 AC099398.1-201ENST00000567919 2776 ntBASIC16.39■□□□□ 0.21
CNIH4Q9P003 MEGF9-201ENST00000373930 6298 ntAPPRIS P1 TSL 2 BASIC16.39■□□□□ 0.21
CNIH4Q9P003 CAMK2B-204ENST00000350811 2292 ntAPPRIS P4 TSL 2 BASIC16.39■□□□□ 0.21
CNIH4Q9P003 APOA5-203ENST00000542499 1929 ntAPPRIS P1 TSL 5 BASIC16.39■□□□□ 0.21
CNIH4Q9P003 FICD-204ENST00000552695 3347 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
CNIH4Q9P003 AC125634.1-201ENST00000438758 1403 ntBASIC16.39■□□□□ 0.21
CNIH4Q9P003 TNIP1-208ENST00000520931 2680 ntAPPRIS ALT2 TSL 1 (best) BASIC16.39■□□□□ 0.21
CNIH4Q9P003 SIGIRR-201ENST00000332725 1639 ntAPPRIS P1 TSL 2 BASIC16.39■□□□□ 0.21
CNIH4Q9P003 METTL21C-201ENST00000267273 1088 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
CNIH4Q9P003 GJC3-201ENST00000312891 1116 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
CNIH4Q9P003 C1QC-201ENST00000374637 1089 ntAPPRIS P1 TSL 3 BASIC16.39■□□□□ 0.21
CNIH4Q9P003 LINC02247-201ENST00000417135 743 ntTSL 3 BASIC16.39■□□□□ 0.21
CNIH4Q9P003 SBDSP1-202ENST00000423945 618 ntTSL 3 BASIC16.39■□□□□ 0.21
CNIH4Q9P003 METTL21A-205ENST00000426075 1051 ntAPPRIS P1 TSL 2 BASIC16.39■□□□□ 0.21
CNIH4Q9P003 RNASEH2C-202ENST00000527610 835 ntTSL 2 BASIC16.39■□□□□ 0.21
CNIH4Q9P003 COX5A-204ENST00000567270 579 ntTSL 3 BASIC16.39■□□□□ 0.21
CNIH4Q9P003 AL138831.2-201ENST00000606564 490 ntBASIC16.39■□□□□ 0.21
CNIH4Q9P003 C1orf43-210ENST00000640799 1287 ntTSL 5 BASIC16.39■□□□□ 0.21
CNIH4Q9P003 N4BP2L1-210ENST00000613078 2032 ntTSL 5 BASIC16.39■□□□□ 0.21
CNIH4Q9P003 SERPINB6-208ENST00000616722 2047 ntTSL 2 BASIC16.39■□□□□ 0.21
CNIH4Q9P003 YAP1-208ENST00000531439 1490 ntAPPRIS ALT2 TSL 1 (best) BASIC16.39■□□□□ 0.21
CNIH4Q9P003 CROCC2-201ENST00000443866 5382 ntAPPRIS P1 TSL 5 BASIC16.39■□□□□ 0.21
CNIH4Q9P003 PDLIM7-202ENST00000355841 1689 ntAPPRIS P4 TSL 1 (best) BASIC16.39■□□□□ 0.21
CNIH4Q9P003 GABRB3-202ENST00000311550 5781 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
CNIH4Q9P003 OGFR-201ENST00000290291 2410 ntAPPRIS P2 TSL 1 (best) BASIC16.39■□□□□ 0.21
CNIH4Q9P003 SMAD4-201ENST00000342988 8769 ntAPPRIS P1 TSL 5 BASIC16.39■□□□□ 0.21
CNIH4Q9P003 NEK10-202ENST00000341435 2638 ntTSL 2 BASIC16.39■□□□□ 0.21
CNIH4Q9P003 FGFR4-207ENST00000502906 2638 ntAPPRIS P4 TSL 1 (best) BASIC16.39■□□□□ 0.21
CNIH4Q9P003 LRRD1-201ENST00000343318 2073 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
CNIH4Q9P003 PRKAG1-206ENST00000548065 2071 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
CNIH4Q9P003 AC097374.2-201ENST00000618617 1306 ntBASIC16.39■□□□□ 0.21
CNIH4Q9P003 DBNDD2-204ENST00000372712 1537 ntAPPRIS P1 TSL 5 BASIC16.39■□□□□ 0.21
CNIH4Q9P003 COQ8A-201ENST00000366777 2872 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
CNIH4Q9P003 RABL6-203ENST00000371663 3078 ntAPPRIS ALT2 TSL 1 (best) BASIC16.39■□□□□ 0.21
CNIH4Q9P003 SNX2-213ENST00000514949 2119 ntTSL 2 BASIC16.39■□□□□ 0.21
CNIH4Q9P003 SLC29A2-206ENST00000546034 2509 ntAPPRIS P1 TSL 5 BASIC16.39■□□□□ 0.21
CNIH4Q9P003 PCDHA13-201ENST00000289272 5260 ntAPPRIS P2 TSL 1 (best) BASIC16.39■□□□□ 0.21
CNIH4Q9P003 SFT2D3-201ENST00000310981 3735 ntAPPRIS P1 BASIC16.39■□□□□ 0.21
CNIH4Q9P003 ACP6-201ENST00000392988 1555 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
CNIH4Q9P003 RABL2A-204ENST00000393167 2179 ntAPPRIS P3 TSL 1 (best) BASIC16.38■□□□□ 0.21
CNIH4Q9P003 EVI5L-202ENST00000538904 2418 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
CNIH4Q9P003 AC079922.2-201ENST00000457336 2022 ntTSL 2 BASIC16.38■□□□□ 0.21
CNIH4Q9P003 LZTS1-203ENST00000522290 1614 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
CNIH4Q9P003 MSL1-206ENST00000579565 1401 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
CNIH4Q9P003 CERCAM-201ENST00000372838 2685 ntAPPRIS P3 TSL 1 (best) BASIC16.38■□□□□ 0.21
CNIH4Q9P003 YAP1-209ENST00000537274 5350 ntAPPRIS ALT2 TSL 5 BASIC16.38■□□□□ 0.21
CNIH4Q9P003 SLC22A1-203ENST00000457470 1452 ntTSL 5 BASIC16.38■□□□□ 0.21
CNIH4Q9P003 NFATC4-223ENST00000555802 1476 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
CNIH4Q9P003 ASPM-201ENST00000294732 6132 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
CNIH4Q9P003 HDDC3-201ENST00000330334 1047 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
CNIH4Q9P003 ID2-202ENST00000331129 623 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
CNIH4Q9P003 HDAC11-204ENST00000404040 967 ntTSL 3 BASIC16.38■□□□□ 0.21
CNIH4Q9P003 PRAP1-202ENST00000463201 587 ntAPPRIS ALT2 TSL 1 (best) BASIC16.38■□□□□ 0.21
CNIH4Q9P003 TMEM41B-203ENST00000527813 803 ntTSL 5 BASIC16.38■□□□□ 0.21
CNIH4Q9P003 AL442663.3-201ENST00000554737 1000 ntTSL 3 BASIC16.38■□□□□ 0.21
CNIH4Q9P003 DCTPP1-204ENST00000568434 853 ntTSL 2 BASIC16.38■□□□□ 0.21
CNIH4Q9P003 BIRC5-207ENST00000590449 568 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
CNIH4Q9P003 BNIP3P18-201ENST00000593976 575 ntBASIC16.38■□□□□ 0.21
CNIH4Q9P003 SSBP1-215ENST00000612337 884 ntAPPRIS P1 TSL 2 BASIC16.38■□□□□ 0.21
CNIH4Q9P003 LMNA-208ENST00000448611 1943 ntTSL 2 BASIC16.38■□□□□ 0.21
CNIH4Q9P003 ENC1-205ENST00000510316 5381 ntTSL 2 BASIC16.38■□□□□ 0.21
CNIH4Q9P003 SEPHS1-202ENST00000378614 2387 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
CNIH4Q9P003 GMPR-201ENST00000259727 1515 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
CNIH4Q9P003 TBC1D3P5-201ENST00000579401 1545 ntBASIC16.38■□□□□ 0.21
CNIH4Q9P003 JAG1-201ENST00000254958 6048 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
CNIH4Q9P003 WDR88-202ENST00000361680 1835 ntAPPRIS ALT2 TSL 1 (best) BASIC16.38■□□□□ 0.21
CNIH4Q9P003 SLC22A7-201ENST00000372574 1822 ntAPPRIS ALT2 TSL 1 (best) BASIC16.38■□□□□ 0.21
CNIH4Q9P003 CD24-204ENST00000619133 2513 ntAPPRIS P3 TSL 2 BASIC16.38■□□□□ 0.21
CNIH4Q9P003 RNF169-201ENST00000299563 7823 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
CNIH4Q9P003 PLAUR-201ENST00000221264 1610 ntAPPRIS ALT2 TSL 1 (best) BASIC16.37■□□□□ 0.21
CNIH4Q9P003 AL023806.1-201ENST00000603994 1649 ntBASIC16.37■□□□□ 0.21
CNIH4Q9P003 METTL9-201ENST00000358154 3256 ntAPPRIS P3 TSL 1 (best) BASIC16.37■□□□□ 0.21
CNIH4Q9P003 AL138828.1-202ENST00000576956 1881 ntTSL 5 BASIC16.37■□□□□ 0.21
CNIH4Q9P003 AL096870.2-201ENST00000565988 2108 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
CNIH4Q9P003 SMN1-204ENST00000506163 1445 ntAPPRIS ALT2 TSL 1 (best) BASIC16.37■□□□□ 0.21
CNIH4Q9P003 UQCC3-201ENST00000377953 1947 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
CNIH4Q9P003 A4GALT-202ENST00000381278 1935 ntAPPRIS P1 TSL 5 BASIC16.37■□□□□ 0.21
CNIH4Q9P003 CSK-202ENST00000439220 1900 ntAPPRIS P1 TSL 2 BASIC16.37■□□□□ 0.21
CNIH4Q9P003 SLC9A1-203ENST00000374086 2183 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
CNIH4Q9P003 CYP2D6-204ENST00000389970 1714 ntTSL 5 BASIC16.37■□□□□ 0.21
CNIH4Q9P003 SPDYE5-203ENST00000625065 1700 ntAPPRIS P2 TSL 5 BASIC16.37■□□□□ 0.21
CNIH4Q9P003 DUOXA1-201ENST00000267803 1996 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
CNIH4Q9P003 KCNK3-201ENST00000302909 6162 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
CNIH4Q9P003 PLEKHG6-203ENST00000396988 2963 ntAPPRIS P1 TSL 2 BASIC16.37■□□□□ 0.21
CNIH4Q9P003 SEMA3B-204ENST00000433753 2755 ntAPPRIS ALT1 TSL 1 (best) BASIC16.37■□□□□ 0.21
CNIH4Q9P003 PROK2-202ENST00000353065 1549 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
CNIH4Q9P003 AP2S1-202ENST00000352203 793 ntTSL 2 BASIC16.37■□□□□ 0.21
CNIH4Q9P003 EDN3-203ENST00000371025 1153 ntAPPRIS ALT2 TSL 1 (best) BASIC16.37■□□□□ 0.21
CNIH4Q9P003 NUS1P2-201ENST00000417358 873 ntBASIC16.37■□□□□ 0.21
CNIH4Q9P003 AL596442.1-201ENST00000429305 429 ntTSL 2 BASIC16.37■□□□□ 0.21
CNIH4Q9P003 MEG3-211ENST00000452514 461 ntTSL 3 BASIC16.37■□□□□ 0.21
CNIH4Q9P003 AC096582.2-201ENST00000510860 516 ntBASIC16.37■□□□□ 0.21
CNIH4Q9P003 AP003555.3-201ENST00000534086 432 ntTSL 4 BASIC16.37■□□□□ 0.21
CNIH4Q9P003 SYNGR2-202ENST00000585591 949 ntAPPRIS P1 TSL 5 BASIC16.37■□□□□ 0.21
CNIH4Q9P003 CCDC61-202ENST00000594087 1017 ntAPPRIS ALT2 TSL 5 BASIC16.37■□□□□ 0.21
CNIH4Q9P003 AP2S1-204ENST00000597020 707 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
CNIH4Q9P003 SPINK2-205ENST00000616980 677 ntTSL 5 BASIC16.37■□□□□ 0.21
CNIH4Q9P003 AC114341.1-201ENST00000618070 349 ntBASIC16.37■□□□□ 0.21
CNIH4Q9P003 IGSF8-201ENST00000314485 2343 ntAPPRIS P2 TSL 1 (best) BASIC16.37■□□□□ 0.21
Retrieved 100 of 98,524 protein–RNA pairs in 27.2 ms