Protein–RNA interactions for Protein: Q9NZZ3

CHMP5, Charged multivesicular body protein 5, humanhuman

Predictions only

Length 219 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP5Q9NZZ3 MAPK7-201ENST00000299612 2715 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
CHMP5Q9NZZ3 CCDC155-201ENST00000447857 2378 ntAPPRIS P2 TSL 1 (best) BASIC20.65■□□□□ 0.9
CHMP5Q9NZZ3 AIFM3-201ENST00000399163 2309 ntAPPRIS ALT1 TSL 1 (best) BASIC20.65■□□□□ 0.9
CHMP5Q9NZZ3 TRPM4-213ENST00000599628 1829 ntTSL 2 BASIC20.65■□□□□ 0.9
CHMP5Q9NZZ3 COBL-201ENST00000265136 5291 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
CHMP5Q9NZZ3 NFKBID-210ENST00000606253 1736 ntAPPRIS ALT2 TSL 1 (best) BASIC20.65■□□□□ 0.9
CHMP5Q9NZZ3 PTCHD3-202ENST00000622555 1720 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
CHMP5Q9NZZ3 PTK7-202ENST00000230419 4272 ntAPPRIS P3 TSL 1 (best) BASIC20.65■□□□□ 0.9
CHMP5Q9NZZ3 KRT8P9-201ENST00000558927 1449 ntBASIC20.65■□□□□ 0.9
CHMP5Q9NZZ3 OR13J1-201ENST00000377981 1339 ntAPPRIS P1 BASIC20.65■□□□□ 0.9
CHMP5Q9NZZ3 NOL4L-211ENST00000621426 6577 ntAPPRIS P2 TSL 5 BASIC20.65■□□□□ 0.9
CHMP5Q9NZZ3 C1QBP-201ENST00000225698 1169 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
CHMP5Q9NZZ3 NDUFS6-201ENST00000274137 1082 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
CHMP5Q9NZZ3 UBB-203ENST00000395839 1012 ntAPPRIS P1 TSL 2 BASIC20.65■□□□□ 0.9
CHMP5Q9NZZ3 GRAP-204ENST00000573099 846 ntTSL 3 BASIC20.65■□□□□ 0.9
CHMP5Q9NZZ3 AP005242.2-201ENST00000580065 1175 ntBASIC20.65■□□□□ 0.9
CHMP5Q9NZZ3 C16orf74-206ENST00000602766 832 ntAPPRIS ALT2 TSL 3 BASIC20.65■□□□□ 0.9
CHMP5Q9NZZ3 SYTL2-215ENST00000527523 3049 ntTSL 2 BASIC20.65■□□□□ 0.9
CHMP5Q9NZZ3 KCNA5-201ENST00000252321 2800 ntAPPRIS P1 BASIC20.65■□□□□ 0.9
CHMP5Q9NZZ3 FOLH1-201ENST00000256999 2635 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
CHMP5Q9NZZ3 SOD2-215ENST00000546087 2558 ntTSL 2 BASIC20.65■□□□□ 0.9
CHMP5Q9NZZ3 MYH14-202ENST00000376970 6787 ntAPPRIS ALT2 TSL 5 BASIC20.65■□□□□ 0.9
CHMP5Q9NZZ3 AC226118.1-201ENST00000515213 2146 ntTSL 2 BASIC20.65■□□□□ 0.9
CHMP5Q9NZZ3 ACTG1-208ENST00000575087 2001 ntAPPRIS P1 TSL 5 BASIC20.65■□□□□ 0.9
CHMP5Q9NZZ3 C14orf93-204ENST00000397377 1776 ntTSL 1 (best) BASIC20.64■□□□□ 0.9
CHMP5Q9NZZ3 ACBD6-201ENST00000367595 1670 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.9
CHMP5Q9NZZ3 ARHGEF28-214ENST00000545377 6351 ntAPPRIS P3 TSL 5 BASIC20.64■□□□□ 0.89
CHMP5Q9NZZ3 SAMD4A-204ENST00000554335 3003 ntAPPRIS P1 TSL 5 BASIC20.64■□□□□ 0.89
CHMP5Q9NZZ3 MDK-204ENST00000395569 686 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
CHMP5Q9NZZ3 MIR935-201ENST00000401179 91 ntBASIC20.64■□□□□ 0.89
CHMP5Q9NZZ3 AL161452.1-201ENST00000415062 1117 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
CHMP5Q9NZZ3 AL590666.2-201ENST00000448869 758 ntTSL 2 BASIC20.64■□□□□ 0.89
CHMP5Q9NZZ3 ADAMTS19-AS1-201ENST00000502827 786 ntTSL 4 BASIC20.64■□□□□ 0.89
CHMP5Q9NZZ3 AC117500.4-201ENST00000542797 617 ntTSL 3 BASIC20.64■□□□□ 0.89
CHMP5Q9NZZ3 PRTN3-202ENST00000544537 1036 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
CHMP5Q9NZZ3 TGIF1-222ENST00000577543 729 ntTSL 3 BASIC20.64■□□□□ 0.89
CHMP5Q9NZZ3 KIAA1586-201ENST00000370733 2933 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
CHMP5Q9NZZ3 PLPPR4-202ENST00000370185 5369 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
CHMP5Q9NZZ3 HEYL-201ENST00000372852 3661 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
CHMP5Q9NZZ3 TUBB2B-201ENST00000259818 2020 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
CHMP5Q9NZZ3 CFAP77-201ENST00000343036 1818 ntAPPRIS P3 TSL 2 BASIC20.64■□□□□ 0.89
CHMP5Q9NZZ3 REPS1-201ENST00000258062 3161 ntAPPRIS P3 TSL 1 (best) BASIC20.64■□□□□ 0.89
CHMP5Q9NZZ3 HOXC6-201ENST00000243108 1733 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
CHMP5Q9NZZ3 GGT6-203ENST00000573591 1730 ntTSL 4 BASIC20.64■□□□□ 0.89
CHMP5Q9NZZ3 HECTD2-204ENST00000446394 4939 ntTSL 2 BASIC20.64■□□□□ 0.89
CHMP5Q9NZZ3 SLBP-202ENST00000429429 1623 ntTSL 2 BASIC20.64■□□□□ 0.89
CHMP5Q9NZZ3 AL360181.3-201ENST00000468317 1605 ntAPPRIS P1 TSL 5 BASIC20.64■□□□□ 0.89
CHMP5Q9NZZ3 AL662844.4-201ENST00000606367 2838 ntBASIC20.63■□□□□ 0.89
CHMP5Q9NZZ3 DBNDD2-204ENST00000372712 1537 ntAPPRIS P1 TSL 5 BASIC20.63■□□□□ 0.89
CHMP5Q9NZZ3 EMX1-202ENST00000394111 1528 ntTSL 3 BASIC20.63■□□□□ 0.89
CHMP5Q9NZZ3 VCAN-204ENST00000502527 2087 ntAPPRIS ALT1 TSL 1 (best) BASIC20.63■□□□□ 0.89
CHMP5Q9NZZ3 LCORL-203ENST00000382226 5009 ntAPPRIS P2 TSL 5 BASIC20.63■□□□□ 0.89
CHMP5Q9NZZ3 FGF4-201ENST00000168712 3233 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
CHMP5Q9NZZ3 GDF6-201ENST00000287020 3701 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
CHMP5Q9NZZ3 PKM-216ENST00000565184 2503 ntAPPRIS ALT1 TSL 1 (best) BASIC20.63■□□□□ 0.89
CHMP5Q9NZZ3 CYP11A1-201ENST00000268053 1934 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
CHMP5Q9NZZ3 REPS2-201ENST00000303843 7771 ntAPPRIS ALT2 TSL 1 (best) BASIC20.63■□□□□ 0.89
CHMP5Q9NZZ3 AK4-208ENST00000546702 1335 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
CHMP5Q9NZZ3 VOPP1-207ENST00000428648 2866 ntTSL 2 BASIC20.63■□□□□ 0.89
CHMP5Q9NZZ3 CES4A-206ENST00000540579 1825 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
CHMP5Q9NZZ3 ZNF414-202ENST00000393927 2300 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
CHMP5Q9NZZ3 BIRC7-203ENST00000395306 593 ntTSL 2 BASIC20.63■□□□□ 0.89
CHMP5Q9NZZ3 ZNF302-209ENST00000507959 854 ntTSL 2 BASIC20.63■□□□□ 0.89
CHMP5Q9NZZ3 PTTG1-205ENST00000520452 895 ntAPPRIS P1 TSL 3 BASIC20.63■□□□□ 0.89
CHMP5Q9NZZ3 JOSD2-204ENST00000598418 996 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
CHMP5Q9NZZ3 AC110813.1-201ENST00000507934 2209 ntTSL 2 BASIC20.63■□□□□ 0.89
CHMP5Q9NZZ3 TSC2-204ENST00000401874 5421 ntAPPRIS ALT2 TSL 1 (best) BASIC20.63■□□□□ 0.89
CHMP5Q9NZZ3 CCDC78-201ENST00000293889 1611 ntAPPRIS P2 TSL 1 (best) BASIC20.63■□□□□ 0.89
CHMP5Q9NZZ3 CCDC43-202ENST00000457422 2058 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
CHMP5Q9NZZ3 DTX3-204ENST00000548804 2067 ntAPPRIS P3 TSL 5 BASIC20.63■□□□□ 0.89
CHMP5Q9NZZ3 NECAB2-203ENST00000565691 2064 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
CHMP5Q9NZZ3 AL109955.1-201ENST00000417346 1540 ntTSL 2 BASIC20.63■□□□□ 0.89
CHMP5Q9NZZ3 CHD1L-203ENST00000369259 2358 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
CHMP5Q9NZZ3 NRG1-216ENST00000523079 2359 ntTSL 2 BASIC20.63■□□□□ 0.89
CHMP5Q9NZZ3 MAPT-205ENST00000351559 5811 ntAPPRIS ALT2 TSL 1 (best) BASIC20.63■□□□□ 0.89
CHMP5Q9NZZ3 CYP2S1-201ENST00000310054 2782 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
CHMP5Q9NZZ3 LAPTM4B-201ENST00000445593 3173 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
CHMP5Q9NZZ3 PBK-203ENST00000522944 1499 ntTSL 2 BASIC20.62■□□□□ 0.89
CHMP5Q9NZZ3 CD276-213ENST00000561213 2690 ntAPPRIS ALT2 TSL 2 BASIC20.62■□□□□ 0.89
CHMP5Q9NZZ3 AC092338.2-201ENST00000568827 1415 ntBASIC20.62■□□□□ 0.89
CHMP5Q9NZZ3 CD209-210ENST00000601951 1439 ntAPPRIS ALT2 TSL 1 (best) BASIC20.62■□□□□ 0.89
CHMP5Q9NZZ3 SUSD4-208ENST00000494793 1833 ntTSL 5 BASIC20.62■□□□□ 0.89
CHMP5Q9NZZ3 CYP2R1-201ENST00000334636 2235 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
CHMP5Q9NZZ3 SMUG1-209ENST00000505128 2607 ntTSL 2 BASIC20.62■□□□□ 0.89
CHMP5Q9NZZ3 CXorf58-201ENST00000379211 1752 ntAPPRIS P2 TSL 1 (best) BASIC20.62■□□□□ 0.89
CHMP5Q9NZZ3 MYB-203ENST00000341911 3672 ntAPPRIS ALT1 TSL 1 (best) BASIC20.62■□□□□ 0.89
CHMP5Q9NZZ3 RHOV-201ENST00000220507 1705 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
CHMP5Q9NZZ3 CALM2-201ENST00000272298 1302 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
CHMP5Q9NZZ3 TXNL1-211ENST00000590954 1339 ntAPPRIS P1 TSL 2 BASIC20.62■□□□□ 0.89
CHMP5Q9NZZ3 MINDY1-201ENST00000312210 2400 ntTSL 2 BASIC20.62■□□□□ 0.89
CHMP5Q9NZZ3 KLC4-202ENST00000347162 2404 ntAPPRIS ALT2 TSL 1 (best) BASIC20.62■□□□□ 0.89
CHMP5Q9NZZ3 LRRN2-203ENST00000367177 3463 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
CHMP5Q9NZZ3 DUSP15-203ENST00000375966 1077 ntTSL 3 BASIC20.62■□□□□ 0.89
CHMP5Q9NZZ3 DUSP15-204ENST00000398083 1212 ntTSL 5 BASIC20.62■□□□□ 0.89
CHMP5Q9NZZ3 DUSP15-205ENST00000398084 1256 ntTSL 5 BASIC20.62■□□□□ 0.89
CHMP5Q9NZZ3 RNF144A-AS1-204ENST00000437589 618 ntTSL 2 BASIC20.62■□□□□ 0.89
CHMP5Q9NZZ3 AL445645.1-201ENST00000451318 1019 ntTSL 2 BASIC20.62■□□□□ 0.89
CHMP5Q9NZZ3 AC128676.1-201ENST00000454392 318 ntBASIC20.62■□□□□ 0.89
CHMP5Q9NZZ3 NDUFB10-202ENST00000543683 830 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
CHMP5Q9NZZ3 P2RY6-209ENST00000540342 1611 ntAPPRIS P1 TSL 2 BASIC20.62■□□□□ 0.89
Retrieved 100 of 98,524 protein–RNA pairs in 39.9 ms