Protein–RNA interactions for Protein: Q9NYX4

CALY, Neuron-specific vesicular protein calcyon, humanhuman

Predictions only

Length 217 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CALYQ9NYX4 TMEM132E-201ENST00000321639 5631 ntAPPRIS ALT2 TSL 5 BASIC14.5□□□□□ -0.09
CALYQ9NYX4 NRN1-201ENST00000244766 1624 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
CALYQ9NYX4 HPDL-201ENST00000334815 1629 ntAPPRIS P1 BASIC14.5□□□□□ -0.09
CALYQ9NYX4 ZNF618-203ENST00000374126 3018 ntAPPRIS ALT2 TSL 1 (best) BASIC14.5□□□□□ -0.09
CALYQ9NYX4 AC133548.2-201ENST00000568567 2605 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
CALYQ9NYX4 TNIP1-221ENST00000610874 2629 ntTSL 5 BASIC14.5□□□□□ -0.09
CALYQ9NYX4 ACTN3-203ENST00000513398 2939 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
CALYQ9NYX4 STRN4-201ENST00000263280 3210 ntAPPRIS P3 TSL 1 (best) BASIC14.5□□□□□ -0.09
CALYQ9NYX4 GMPR-201ENST00000259727 1515 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
CALYQ9NYX4 PPP3CA-201ENST00000323055 4519 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
CALYQ9NYX4 AMT-250ENST00000637682 1823 ntTSL 5 BASIC14.5□□□□□ -0.09
CALYQ9NYX4 FCER2-202ENST00000360067 1482 ntAPPRIS ALT2 TSL 5 BASIC14.5□□□□□ -0.09
CALYQ9NYX4 TLCD2-201ENST00000330676 5971 ntAPPRIS P1 TSL 2 BASIC14.5□□□□□ -0.09
CALYQ9NYX4 LGMN-201ENST00000334869 2055 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
CALYQ9NYX4 ZBTB7C-221ENST00000590800 4947 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
CALYQ9NYX4 AC016396.2-201ENST00000562575 1417 ntBASIC14.49□□□□□ -0.09
CALYQ9NYX4 SBNO2-204ENST00000587024 4861 ntAPPRIS ALT2 TSL 2 BASIC14.49□□□□□ -0.09
CALYQ9NYX4 NOMO1-208ENST00000620755 3921 ntAPPRIS ALT2 TSL 1 (best) BASIC14.49□□□□□ -0.09
CALYQ9NYX4 PARVG-206ENST00000444313 3523 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
CALYQ9NYX4 AQP8-201ENST00000219660 1359 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
CALYQ9NYX4 LSP1-201ENST00000311604 1699 ntAPPRIS P4 TSL 1 (best) BASIC14.49□□□□□ -0.09
CALYQ9NYX4 SLC8A3-203ENST00000357887 5259 ntTSL 5 BASIC14.49□□□□□ -0.09
CALYQ9NYX4 SLC8A3-204ENST00000381269 5268 ntAPPRIS ALT1 TSL 1 (best) BASIC14.49□□□□□ -0.09
CALYQ9NYX4 KCNA2-201ENST00000316361 2827 ntAPPRIS P1 TSL 2 BASIC14.49□□□□□ -0.09
CALYQ9NYX4 FAM234A-202ENST00000301679 1936 ntTSL 2 BASIC14.49□□□□□ -0.09
CALYQ9NYX4 HAS3-205ENST00000569188 2170 ntAPPRIS P1 TSL 2 BASIC14.49□□□□□ -0.09
CALYQ9NYX4 AC106820.2-201ENST00000563775 3264 ntBASIC14.49□□□□□ -0.09
CALYQ9NYX4 TYMSOS-201ENST00000323813 844 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
CALYQ9NYX4 BOLA1-202ENST00000369152 859 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
CALYQ9NYX4 BEX4-201ENST00000372691 1066 ntAPPRIS P1 TSL 2 BASIC14.49□□□□□ -0.09
CALYQ9NYX4 ATP5J-203ENST00000400090 647 ntAPPRIS P1 TSL 2 BASIC14.49□□□□□ -0.09
CALYQ9NYX4 COPS8-203ENST00000409334 794 ntTSL 5 BASIC14.49□□□□□ -0.09
CALYQ9NYX4 C16orf91-201ENST00000442039 978 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
CALYQ9NYX4 KRT17P6-201ENST00000453795 1220 ntBASIC14.49□□□□□ -0.09
CALYQ9NYX4 AC010655.4-201ENST00000462662 707 ntTSL 4 BASIC14.49□□□□□ -0.09
CALYQ9NYX4 SMIM4-202ENST00000476842 522 ntTSL 4 BASIC14.49□□□□□ -0.09
CALYQ9NYX4 MTG1-205ENST00000477902 1283 ntTSL 3 BASIC14.49□□□□□ -0.09
CALYQ9NYX4 AC004801.5-202ENST00000546804 530 ntTSL 4 BASIC14.49□□□□□ -0.09
CALYQ9NYX4 AC005906.2-206ENST00000638180 1029 ntTSL 5 BASIC14.49□□□□□ -0.09
CALYQ9NYX4 DOCK7-203ENST00000404627 2678 ntTSL 2 BASIC14.49□□□□□ -0.09
CALYQ9NYX4 HOXA2-201ENST00000222718 1814 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
CALYQ9NYX4 ABHD14B-206ENST00000483233 2056 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
CALYQ9NYX4 SBNO2-202ENST00000438103 4537 ntAPPRIS ALT2 TSL 2 BASIC14.49□□□□□ -0.09
CALYQ9NYX4 AC020916.1-201ENST00000587762 1774 ntBASIC14.49□□□□□ -0.09
CALYQ9NYX4 RASA2-202ENST00000452898 2562 ntAPPRIS ALT2 TSL 5 BASIC14.49□□□□□ -0.09
CALYQ9NYX4 FAM9B-202ENST00000362066 2047 ntTSL 2 BASIC14.49□□□□□ -0.09
CALYQ9NYX4 ITSN2-201ENST00000355123 6300 ntAPPRIS P4 TSL 1 (best) BASIC14.49□□□□□ -0.09
CALYQ9NYX4 AL139099.2-201ENST00000555043 2469 ntTSL 2 BASIC14.49□□□□□ -0.09
CALYQ9NYX4 SBF2-AS1-201ENST00000498905 2709 ntTSL 5 BASIC14.49□□□□□ -0.09
CALYQ9NYX4 PTGER3-202ENST00000351052 1404 ntAPPRIS ALT2 TSL 5 BASIC14.49□□□□□ -0.09
CALYQ9NYX4 MFSD2A-202ENST00000372811 2154 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
CALYQ9NYX4 SLC27A2-202ENST00000380902 2181 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
CALYQ9NYX4 GCSH-209ENST00000639689 2412 ntTSL 5 BASIC14.49□□□□□ -0.09
CALYQ9NYX4 TMEFF2-201ENST00000272771 2604 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
CALYQ9NYX4 MCU-201ENST00000357157 2874 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
CALYQ9NYX4 ARNT-212ENST00000515192 2892 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
CALYQ9NYX4 AC010186.2-201ENST00000575094 2612 ntTSL 2 BASIC14.48□□□□□ -0.09
CALYQ9NYX4 NPTN-202ENST00000351217 2817 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
CALYQ9NYX4 RNF34-201ENST00000361234 2066 ntAPPRIS ALT1 TSL 1 (best) BASIC14.48□□□□□ -0.09
CALYQ9NYX4 RETREG1-201ENST00000306320 3268 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
CALYQ9NYX4 LINC01700-201ENST00000433952 1598 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
CALYQ9NYX4 AL034417.2-201ENST00000445300 2044 ntTSL 2 BASIC14.48□□□□□ -0.09
CALYQ9NYX4 LINC00905-202ENST00000588117 1768 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
CALYQ9NYX4 LSR-212ENST00000602122 2480 ntAPPRIS ALT2 TSL 2 BASIC14.48□□□□□ -0.09
CALYQ9NYX4 PLTP-202ENST00000372420 1530 ntTSL 2 BASIC14.48□□□□□ -0.09
CALYQ9NYX4 HMBS-203ENST00000442944 1548 ntTSL 5 BASIC14.48□□□□□ -0.09
CALYQ9NYX4 ROBO3-221ENST00000543966 1520 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
CALYQ9NYX4 ODF2-204ENST00000372814 2249 ntTSL 2 BASIC14.48□□□□□ -0.09
CALYQ9NYX4 KCNK3-201ENST00000302909 6162 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
CALYQ9NYX4 C8orf33-201ENST00000331434 2677 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
CALYQ9NYX4 BOLA2B-201ENST00000305321 1012 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
CALYQ9NYX4 BOLA2-201ENST00000330978 1012 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
CALYQ9NYX4 EFCAB2-203ENST00000366523 1233 ntAPPRIS P1 TSL 3 BASIC14.48□□□□□ -0.09
CALYQ9NYX4 PSMB8-202ENST00000374882 1124 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
CALYQ9NYX4 MPIG6B-205ENST00000375810 910 ntAPPRIS ALT2 TSL 1 (best) BASIC14.48□□□□□ -0.09
CALYQ9NYX4 RPS9-203ENST00000391752 772 ntAPPRIS P1 TSL 2 BASIC14.48□□□□□ -0.09
CALYQ9NYX4 RNASEH2C-202ENST00000527610 835 ntTSL 2 BASIC14.48□□□□□ -0.09
CALYQ9NYX4 CSRP1-214ENST00000531916 890 ntTSL 5 BASIC14.48□□□□□ -0.09
CALYQ9NYX4 HOXB8-203ENST00000576562 743 ntAPPRIS ALT1 TSL 2 BASIC14.48□□□□□ -0.09
CALYQ9NYX4 C19orf25-204ENST00000586564 1265 ntAPPRIS P1 TSL 3 BASIC14.48□□□□□ -0.09
CALYQ9NYX4 TK1-204ENST00000590430 683 ntTSL 3 BASIC14.48□□□□□ -0.09
CALYQ9NYX4 KISS1R-203ENST00000606939 964 ntTSL 5 BASIC14.48□□□□□ -0.09
CALYQ9NYX4 CYP2W1-202ENST00000340150 2361 ntTSL 2 BASIC14.48□□□□□ -0.09
CALYQ9NYX4 GDF5-202ENST00000374372 2572 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
CALYQ9NYX4 TMEM65-201ENST00000297632 9029 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
CALYQ9NYX4 LTBP4-205ENST00000396819 4764 ntAPPRIS ALT2 TSL 1 (best) BASIC14.48□□□□□ -0.09
CALYQ9NYX4 CORO6-210ENST00000580212 2345 ntTSL 5 BASIC14.48□□□□□ -0.09
CALYQ9NYX4 AC009779.2-201ENST00000552576 1443 ntTSL 4 BASIC14.48□□□□□ -0.09
CALYQ9NYX4 LRRC58-201ENST00000295628 7903 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
CALYQ9NYX4 SPSB4-201ENST00000310546 2908 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
CALYQ9NYX4 MEG3-205ENST00000412736 1615 ntTSL 2 BASIC14.48□□□□□ -0.09
CALYQ9NYX4 EMB-204ENST00000508934 1617 ntAPPRIS ALT2 TSL 5 BASIC14.48□□□□□ -0.09
CALYQ9NYX4 SMARCA4-215ENST00000590574 5282 ntAPPRIS ALT1 TSL 5 BASIC14.48□□□□□ -0.09
CALYQ9NYX4 NFATC2-206ENST00000609943 5690 ntAPPRIS ALT2 TSL 1 (best) BASIC14.48□□□□□ -0.09
CALYQ9NYX4 OSGIN1-202ENST00000361711 2230 ntAPPRIS P1 TSL 2 BASIC14.47□□□□□ -0.09
CALYQ9NYX4 PORCN-205ENST00000367574 1368 ntAPPRIS ALT1 TSL 1 (best) BASIC14.47□□□□□ -0.09
CALYQ9NYX4 PORCN-214ENST00000537758 1371 ntAPPRIS ALT1 TSL 1 (best) BASIC14.47□□□□□ -0.09
CALYQ9NYX4 ANAPC11-211ENST00000575195 1361 ntAPPRIS P1 TSL 2 BASIC14.47□□□□□ -0.09
CALYQ9NYX4 SNX17-210ENST00000537606 2400 ntTSL 2 BASIC14.47□□□□□ -0.09
CALYQ9NYX4 FGFR4-207ENST00000502906 2638 ntAPPRIS P4 TSL 1 (best) BASIC14.47□□□□□ -0.09
Retrieved 100 of 98,524 protein–RNA pairs in 45 ms