Protein–RNA interactions for Protein: Q9NYD6

HOXC10, Homeobox protein Hox-C10, humanhuman

Predictions only

Length 342 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC10Q9NYD6 SAMD11-214ENST00000618323 2159 ntTSL 5 BASIC19.93■□□□□ 0.78
HOXC10Q9NYD6 MAPRE3-201ENST00000233121 1892 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
HOXC10Q9NYD6 EFHD2-201ENST00000375980 2419 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
HOXC10Q9NYD6 NRXN1-202ENST00000342183 3315 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
HOXC10Q9NYD6 TMEM179-201ENST00000341595 2513 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
HOXC10Q9NYD6 USP18-201ENST00000215794 2129 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
HOXC10Q9NYD6 BLOC1S2-202ENST00000370372 1249 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
HOXC10Q9NYD6 NDUFA4L2-201ENST00000393825 1186 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
HOXC10Q9NYD6 AL031587.1-201ENST00000410099 1055 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
HOXC10Q9NYD6 AP000344.2-201ENST00000512987 629 ntBASIC19.92■□□□□ 0.78
HOXC10Q9NYD6 AC124067.2-201ENST00000521989 510 ntTSL 2 BASIC19.92■□□□□ 0.78
HOXC10Q9NYD6 RFPL4AP1-201ENST00000530883 850 ntBASIC19.92■□□□□ 0.78
HOXC10Q9NYD6 LINC01128-210ENST00000609139 455 ntTSL 3 BASIC19.92■□□□□ 0.78
HOXC10Q9NYD6 CITED2-204ENST00000618718 901 ntTSL 2 BASIC19.92■□□□□ 0.78
HOXC10Q9NYD6 AC091812.2-201ENST00000619081 385 ntBASIC19.92■□□□□ 0.78
HOXC10Q9NYD6 FOXS1-201ENST00000375978 1319 ntAPPRIS P1 BASIC19.92■□□□□ 0.78
HOXC10Q9NYD6 GRAP2-202ENST00000407075 1304 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
HOXC10Q9NYD6 VGLL4-211ENST00000430365 1377 ntAPPRIS P1 TSL 2 BASIC19.92■□□□□ 0.78
HOXC10Q9NYD6 RPRD1A-209ENST00000590898 1945 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
HOXC10Q9NYD6 OGFOD2-224ENST00000545612 1465 ntTSL 2 BASIC19.92■□□□□ 0.78
HOXC10Q9NYD6 PTTG1IP-204ENST00000445724 2497 ntTSL 2 BASIC19.92■□□□□ 0.78
HOXC10Q9NYD6 SYNGR2-206ENST00000589711 2041 ntTSL 5 BASIC19.92■□□□□ 0.78
HOXC10Q9NYD6 KRBOX1-AS1-201ENST00000447834 2134 ntTSL 2 BASIC19.91■□□□□ 0.78
HOXC10Q9NYD6 KRT28-201ENST00000306658 1685 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
HOXC10Q9NYD6 ELN-202ENST00000320399 2274 ntAPPRIS ALT2 TSL 5 BASIC19.91■□□□□ 0.78
HOXC10Q9NYD6 GGNBP2-210ENST00000611219 2315 ntTSL 2 BASIC19.91■□□□□ 0.78
HOXC10Q9NYD6 PCDHA2-203ENST00000526136 5254 ntAPPRIS P2 TSL 1 (best) BASIC19.91■□□□□ 0.78
HOXC10Q9NYD6 TMEM179B-201ENST00000333449 1023 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
HOXC10Q9NYD6 ASTL-201ENST00000342380 1296 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
HOXC10Q9NYD6 ICAM2-202ENST00000418105 1252 ntAPPRIS P1 TSL 3 BASIC19.91■□□□□ 0.78
HOXC10Q9NYD6 GSTK1-207ENST00000479303 1185 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
HOXC10Q9NYD6 PXN-AS1-202ENST00000538804 508 ntTSL 4 BASIC19.91■□□□□ 0.78
HOXC10Q9NYD6 NDUFS7-216ENST00000546283 1060 ntTSL 2 BASIC19.91■□□□□ 0.78
HOXC10Q9NYD6 AC009061.1-201ENST00000567261 475 ntTSL 3 BASIC19.91■□□□□ 0.78
HOXC10Q9NYD6 OVCA2-201ENST00000572195 1122 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
HOXC10Q9NYD6 ICAM2-208ENST00000579788 1103 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
HOXC10Q9NYD6 QSOX2-201ENST00000358701 4530 ntAPPRIS P1 TSL 2 BASIC19.91■□□□□ 0.78
HOXC10Q9NYD6 CEP55-201ENST00000371485 2638 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
HOXC10Q9NYD6 AC129492.6-201ENST00000611383 1305 ntBASIC19.91■□□□□ 0.78
HOXC10Q9NYD6 DYRK1B-203ENST00000430012 2007 ntAPPRIS ALT1 TSL 5 BASIC19.91■□□□□ 0.78
HOXC10Q9NYD6 ARF1-214ENST00000541182 2006 ntAPPRIS P1 TSL 2 BASIC19.91■□□□□ 0.78
HOXC10Q9NYD6 ZFP69-202ENST00000372706 2871 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
HOXC10Q9NYD6 DCST1-204ENST00000423025 2199 ntAPPRIS ALT2 TSL 2 BASIC19.91■□□□□ 0.78
HOXC10Q9NYD6 GMPPA-202ENST00000341142 1524 ntAPPRIS P1 TSL 5 BASIC19.91■□□□□ 0.78
HOXC10Q9NYD6 SPSB1-201ENST00000328089 3120 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
HOXC10Q9NYD6 RAB7A-203ENST00000482525 1589 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
HOXC10Q9NYD6 HBEGF-201ENST00000230990 2386 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
HOXC10Q9NYD6 LMLN-204ENST00000420910 2423 ntAPPRIS P2 TSL 1 (best) BASIC19.91■□□□□ 0.78
HOXC10Q9NYD6 DSCR9-201ENST00000454482 1644 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
HOXC10Q9NYD6 MIOX-202ENST00000395732 1658 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
HOXC10Q9NYD6 AC090206.1-201ENST00000615734 1678 ntTSL 5 BASIC19.91■□□□□ 0.78
HOXC10Q9NYD6 GPC2-201ENST00000292377 2532 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
HOXC10Q9NYD6 PPT2-247ENST00000375143 1754 ntAPPRIS ALT2 TSL 5 BASIC19.9■□□□□ 0.78
HOXC10Q9NYD6 SYN2-206ENST00000621198 2674 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
HOXC10Q9NYD6 ADAM15-207ENST00000368413 1901 ntTSL 5 BASIC19.9■□□□□ 0.78
HOXC10Q9NYD6 HOXA-AS3-205ENST00000524304 2063 ntTSL 2 BASIC19.9■□□□□ 0.78
HOXC10Q9NYD6 ABHD13-201ENST00000375898 5338 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
HOXC10Q9NYD6 CLDND1-204ENST00000394185 2159 ntAPPRIS P1 TSL 5 BASIC19.9■□□□□ 0.78
HOXC10Q9NYD6 IGFBP4-201ENST00000269593 2200 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
HOXC10Q9NYD6 YTHDF3-214ENST00000621890 2296 ntTSL 5 BASIC19.9■□□□□ 0.78
HOXC10Q9NYD6 LSM12-201ENST00000293406 2308 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
HOXC10Q9NYD6 PNPLA2-201ENST00000336615 2428 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
HOXC10Q9NYD6 FAM19A5-204ENST00000406880 833 ntTSL 3 BASIC19.9■□□□□ 0.78
HOXC10Q9NYD6 NPY-203ENST00000407573 705 ntAPPRIS P1 TSL 3 BASIC19.9■□□□□ 0.78
HOXC10Q9NYD6 MIPEPP3-202ENST00000424756 347 ntTSL 3 BASIC19.9■□□□□ 0.78
HOXC10Q9NYD6 CYMP-203ENST00000474680 1263 ntBASIC19.9■□□□□ 0.78
HOXC10Q9NYD6 SWI5-205ENST00000495313 466 ntAPPRIS ALT2 TSL 3 BASIC19.9■□□□□ 0.78
HOXC10Q9NYD6 CYB561D1-208ENST00000528785 1271 ntAPPRIS ALT1 TSL 5 BASIC19.9■□□□□ 0.78
HOXC10Q9NYD6 PRELID3A-208ENST00000590956 777 ntTSL 2 BASIC19.9■□□□□ 0.78
HOXC10Q9NYD6 LINC01128-208ENST00000608189 824 ntTSL 5 BASIC19.9■□□□□ 0.78
HOXC10Q9NYD6 PDCD6-214ENST00000628729 1073 ntTSL 5 BASIC19.9■□□□□ 0.78
HOXC10Q9NYD6 AL157832.3-201ENST00000635764 1005 ntTSL 5 BASIC19.9■□□□□ 0.78
HOXC10Q9NYD6 AC092902.6-201ENST00000641783 218 ntBASIC19.9■□□□□ 0.78
HOXC10Q9NYD6 PGLYRP1-201ENST00000008938 720 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
HOXC10Q9NYD6 CD248-201ENST00000311330 2558 ntAPPRIS P1 BASIC19.9■□□□□ 0.78
HOXC10Q9NYD6 KLK5-203ENST00000593428 1365 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
HOXC10Q9NYD6 MARK2-202ENST00000361128 3004 ntAPPRIS ALT2 TSL 1 (best) BASIC19.9■□□□□ 0.78
HOXC10Q9NYD6 SPART-209ENST00000494062 3018 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
HOXC10Q9NYD6 NFIB-208ENST00000397581 3318 ntTSL 5 BASIC19.9■□□□□ 0.78
HOXC10Q9NYD6 DENND1A-203ENST00000373624 5010 ntAPPRIS P4 TSL 5 BASIC19.9■□□□□ 0.78
HOXC10Q9NYD6 BPGM-203ENST00000418040 1870 ntAPPRIS P1 TSL 5 BASIC19.9■□□□□ 0.78
HOXC10Q9NYD6 GOLGA7-202ENST00000405786 1903 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
HOXC10Q9NYD6 KRT79-201ENST00000330553 2068 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
HOXC10Q9NYD6 NFATC1-206ENST00000542384 2142 ntAPPRIS ALT2 TSL 1 (best) BASIC19.9■□□□□ 0.78
HOXC10Q9NYD6 CCDC17-209ENST00000528266 2181 ntAPPRIS P3 TSL 2 BASIC19.9■□□□□ 0.78
HOXC10Q9NYD6 CXXC1-212ENST00000589940 2242 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
HOXC10Q9NYD6 ORC5-201ENST00000297431 1958 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
HOXC10Q9NYD6 PRAMEF20-201ENST00000316412 1597 ntAPPRIS P1 TSL 5 BASIC19.89■□□□□ 0.77
HOXC10Q9NYD6 GRHPR-201ENST00000318158 1280 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
HOXC10Q9NYD6 SERHL2-203ENST00000340239 1315 ntTSL 5 BASIC19.89■□□□□ 0.77
HOXC10Q9NYD6 C6orf99-202ENST00000367073 769 ntTSL 5 BASIC19.89■□□□□ 0.77
HOXC10Q9NYD6 GPANK1-202ENST00000375895 1800 ntAPPRIS P1 TSL 5 BASIC19.89■□□□□ 0.77
HOXC10Q9NYD6 PCCA-202ENST00000376285 2494 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
HOXC10Q9NYD6 SELENOH-201ENST00000388857 833 ntAPPRIS P2 TSL 1 (best) BASIC19.89■□□□□ 0.77
HOXC10Q9NYD6 PLD3-207ENST00000409735 2140 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
HOXC10Q9NYD6 XXYLT1-205ENST00000437101 2149 ntTSL 2 BASIC19.89■□□□□ 0.77
HOXC10Q9NYD6 IRF3-204ENST00000442265 315 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
HOXC10Q9NYD6 AL513480.1-201ENST00000451731 511 ntBASIC19.89■□□□□ 0.77
HOXC10Q9NYD6 FOXP1-210ENST00000484350 1996 ntTSL 2 BASIC19.89■□□□□ 0.77
HOXC10Q9NYD6 SEC24B-AS1-201ENST00000499359 957 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
Retrieved 100 of 98,524 protein–RNA pairs in 21.8 ms