Protein–RNA interactions for Protein: Q9NP79

VTA1, Vacuolar protein sorting-associated protein VTA1 homolog, humanhuman

Predictions only

Length 307 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VTA1Q9NP79 RIMS4-202ENST00000541604 1036 ntAPPRIS ALT1 TSL 1 (best) BASIC19.46■□□□□ 0.71
VTA1Q9NP79 ICAM2-208ENST00000579788 1103 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
VTA1Q9NP79 TK1-204ENST00000590430 683 ntTSL 3 BASIC19.46■□□□□ 0.71
VTA1Q9NP79 HNRNPDL-206ENST00000602300 1291 ntAPPRIS ALT2 TSL 1 (best) BASIC19.46■□□□□ 0.71
VTA1Q9NP79 LINC01128-208ENST00000608189 824 ntTSL 5 BASIC19.46■□□□□ 0.71
VTA1Q9NP79 LINC01128-210ENST00000609139 455 ntTSL 3 BASIC19.46■□□□□ 0.71
VTA1Q9NP79 NMRK2-205ENST00000616156 1139 ntAPPRIS ALT2 TSL 5 BASIC19.46■□□□□ 0.71
VTA1Q9NP79 ADAM15-207ENST00000368413 1901 ntTSL 5 BASIC19.46■□□□□ 0.71
VTA1Q9NP79 PPT2-247ENST00000375143 1754 ntAPPRIS ALT2 TSL 5 BASIC19.46■□□□□ 0.71
VTA1Q9NP79 PDE6B-202ENST00000429163 2120 ntTSL 2 BASIC19.46■□□□□ 0.71
VTA1Q9NP79 NFATC1-206ENST00000542384 2142 ntAPPRIS ALT2 TSL 1 (best) BASIC19.46■□□□□ 0.71
VTA1Q9NP79 FAM198A-202ENST00000430121 3121 ntAPPRIS P2 TSL 5 BASIC19.46■□□□□ 0.71
VTA1Q9NP79 PCCA-202ENST00000376285 2494 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
VTA1Q9NP79 VOPP1-201ENST00000285279 2962 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
VTA1Q9NP79 JMJD6-205ENST00000585429 1330 ntTSL 5 BASIC19.46■□□□□ 0.71
VTA1Q9NP79 KRT28-201ENST00000306658 1685 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
VTA1Q9NP79 SMOC1-201ENST00000361956 2040 ntAPPRIS ALT1 TSL 1 (best) BASIC19.46■□□□□ 0.71
VTA1Q9NP79 DYRK1B-203ENST00000430012 2007 ntAPPRIS ALT1 TSL 5 BASIC19.46■□□□□ 0.71
VTA1Q9NP79 MIB2-203ENST00000378712 2890 ntTSL 2 BASIC19.46■□□□□ 0.71
VTA1Q9NP79 BPGM-203ENST00000418040 1870 ntAPPRIS P1 TSL 5 BASIC19.45■□□□□ 0.7
VTA1Q9NP79 KLK5-203ENST00000593428 1365 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
VTA1Q9NP79 RHOT1-202ENST00000354266 2919 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
VTA1Q9NP79 HOXA-AS3-205ENST00000524304 2063 ntTSL 2 BASIC19.45■□□□□ 0.7
VTA1Q9NP79 PRAMEF20-201ENST00000316412 1597 ntAPPRIS P1 TSL 5 BASIC19.45■□□□□ 0.7
VTA1Q9NP79 ZDHHC4-205ENST00000396713 1552 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
VTA1Q9NP79 RAB7A-203ENST00000482525 1589 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
VTA1Q9NP79 SLC12A9-215ENST00000540482 2269 ntTSL 2 BASIC19.45■□□□□ 0.7
VTA1Q9NP79 ORC5-201ENST00000297431 1958 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
VTA1Q9NP79 CLDND1-204ENST00000394185 2159 ntAPPRIS P1 TSL 5 BASIC19.45■□□□□ 0.7
VTA1Q9NP79 TECR-201ENST00000215567 1171 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
VTA1Q9NP79 GRHPR-201ENST00000318158 1280 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
VTA1Q9NP79 HIST2H3D-201ENST00000331491 411 ntAPPRIS P1 BASIC19.45■□□□□ 0.7
VTA1Q9NP79 CRLF2-202ENST00000381567 1013 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
VTA1Q9NP79 HIST2H3PS2-201ENST00000392948 411 ntAPPRIS P1 BASIC19.45■□□□□ 0.7
VTA1Q9NP79 DDT-204ENST00000404092 805 ntTSL 3 BASIC19.45■□□□□ 0.7
VTA1Q9NP79 AC013270.1-201ENST00000425578 440 ntTSL 2 BASIC19.45■□□□□ 0.7
VTA1Q9NP79 CYMP-203ENST00000474680 1263 ntBASIC19.45■□□□□ 0.7
VTA1Q9NP79 MRPL52-208ENST00000553711 586 ntTSL 3 BASIC19.45■□□□□ 0.7
VTA1Q9NP79 METTL23-203ENST00000586738 1059 ntTSL 5 BASIC19.45■□□□□ 0.7
VTA1Q9NP79 METTL23-205ENST00000588302 925 ntTSL 5 BASIC19.45■□□□□ 0.7
VTA1Q9NP79 AC010776.2-201ENST00000588946 1081 ntTSL 2 BASIC19.45■□□□□ 0.7
VTA1Q9NP79 FXYD1-208ENST00000589209 428 ntAPPRIS P1 TSL 5 BASIC19.45■□□□□ 0.7
VTA1Q9NP79 SLC9A3-AS1-205ENST00000606319 477 ntTSL 3 BASIC19.45■□□□□ 0.7
VTA1Q9NP79 ACTL9-202ENST00000612068 1252 ntBASIC19.45■□□□□ 0.7
VTA1Q9NP79 FXYD1-211ENST00000612146 690 ntAPPRIS P1 TSL 3 BASIC19.45■□□□□ 0.7
VTA1Q9NP79 AC092902.6-201ENST00000641783 218 ntBASIC19.45■□□□□ 0.7
VTA1Q9NP79 PGLYRP1-201ENST00000008938 720 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
VTA1Q9NP79 ANXA6-201ENST00000354546 2593 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
VTA1Q9NP79 QKI-203ENST00000361752 9463 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
VTA1Q9NP79 SMPD3-211ENST00000568373 2073 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
VTA1Q9NP79 KLF13-201ENST00000307145 6825 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
VTA1Q9NP79 TTLL10-203ENST00000379290 2283 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
VTA1Q9NP79 MEST-201ENST00000223215 2465 ntAPPRIS P4 TSL 1 (best) BASIC19.45■□□□□ 0.7
VTA1Q9NP79 TBC1D4-201ENST00000377625 6182 ntAPPRIS ALT2 TSL 1 (best) BASIC19.45■□□□□ 0.7
VTA1Q9NP79 LHFPL6-201ENST00000379589 2110 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
VTA1Q9NP79 PLD3-207ENST00000409735 2140 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
VTA1Q9NP79 LSM12-201ENST00000293406 2308 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
VTA1Q9NP79 PGRMC1-202ENST00000535419 1762 ntTSL 2 BASIC19.44■□□□□ 0.7
VTA1Q9NP79 RAB17-201ENST00000264601 1966 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
VTA1Q9NP79 CEP55-201ENST00000371485 2638 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
VTA1Q9NP79 PNPLA2-201ENST00000336615 2428 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
VTA1Q9NP79 KRT79-201ENST00000330553 2068 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
VTA1Q9NP79 NUDT4-202ENST00000415493 4839 ntAPPRIS ALT1 TSL 1 (best) BASIC19.44■□□□□ 0.7
VTA1Q9NP79 SFTPC-201ENST00000318561 997 ntAPPRIS P3 TSL 1 (best) BASIC19.44■□□□□ 0.7
VTA1Q9NP79 PLK5-201ENST00000334770 2106 ntAPPRIS P2 TSL 2 BASIC19.44■□□□□ 0.7
VTA1Q9NP79 STOM-202ENST00000347359 870 ntTSL 2 BASIC19.44■□□□□ 0.7
VTA1Q9NP79 BAX-203ENST00000354470 433 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
VTA1Q9NP79 C9orf116-202ENST00000371789 1278 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
VTA1Q9NP79 EIF3B-202ENST00000397011 2966 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
VTA1Q9NP79 CYB561D1-208ENST00000528785 1271 ntAPPRIS ALT1 TSL 5 BASIC19.44■□□□□ 0.7
VTA1Q9NP79 CYB561D1-209ENST00000533024 913 ntTSL 2 BASIC19.44■□□□□ 0.7
VTA1Q9NP79 AC009061.1-201ENST00000567261 475 ntTSL 3 BASIC19.44■□□□□ 0.7
VTA1Q9NP79 AC027612.4-201ENST00000605371 583 ntBASIC19.44■□□□□ 0.7
VTA1Q9NP79 GOLGA7-202ENST00000405786 1903 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
VTA1Q9NP79 SHOX-204ENST00000554971 1902 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
VTA1Q9NP79 RPRD1A-209ENST00000590898 1945 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
VTA1Q9NP79 CCDC17-209ENST00000528266 2181 ntAPPRIS P3 TSL 2 BASIC19.44■□□□□ 0.7
VTA1Q9NP79 HSD17B6-203ENST00000554150 1547 ntAPPRIS P1 TSL 5 BASIC19.44■□□□□ 0.7
VTA1Q9NP79 UQCRC1-201ENST00000203407 1985 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
VTA1Q9NP79 RPS6KA1-203ENST00000374166 3131 ntTSL 5 BASIC19.44■□□□□ 0.7
VTA1Q9NP79 MAPKAPK2-202ENST00000367103 2961 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
VTA1Q9NP79 VGLL4-211ENST00000430365 1377 ntAPPRIS P1 TSL 2 BASIC19.44■□□□□ 0.7
VTA1Q9NP79 TPSAB1-202ENST00000461509 1357 ntAPPRIS ALT2 TSL 1 (best) BASIC19.44■□□□□ 0.7
VTA1Q9NP79 GPC2-201ENST00000292377 2532 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
VTA1Q9NP79 CD248-201ENST00000311330 2558 ntAPPRIS P1 BASIC19.43■□□□□ 0.7
VTA1Q9NP79 GALNT2-201ENST00000366672 4454 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
VTA1Q9NP79 AC090206.1-201ENST00000615734 1678 ntTSL 5 BASIC19.43■□□□□ 0.7
VTA1Q9NP79 RIMKLB-202ENST00000357529 5830 ntAPPRIS P1 TSL 5 BASIC19.43■□□□□ 0.7
VTA1Q9NP79 MTMR12-201ENST00000264934 2215 ntTSL 2 BASIC19.43■□□□□ 0.7
VTA1Q9NP79 PTTG1IP-204ENST00000445724 2497 ntTSL 2 BASIC19.43■□□□□ 0.7
VTA1Q9NP79 DPM2-201ENST00000314392 1542 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
VTA1Q9NP79 GMPPA-202ENST00000341142 1524 ntAPPRIS P1 TSL 5 BASIC19.43■□□□□ 0.7
VTA1Q9NP79 ROPN1L-201ENST00000274134 1066 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
VTA1Q9NP79 ABHD11-203ENST00000395147 812 ntTSL 3 BASIC19.43■□□□□ 0.7
VTA1Q9NP79 FAM19A5-204ENST00000406880 833 ntTSL 3 BASIC19.43■□□□□ 0.7
VTA1Q9NP79 AL645939.2-201ENST00000427340 991 ntBASIC19.43■□□□□ 0.7
VTA1Q9NP79 IRF3-204ENST00000442265 315 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
VTA1Q9NP79 AL513480.1-201ENST00000451731 511 ntBASIC19.43■□□□□ 0.7
VTA1Q9NP79 AC087163.2-201ENST00000457299 853 ntBASIC19.43■□□□□ 0.7
VTA1Q9NP79 SLC25A6P2-201ENST00000497974 877 ntBASIC19.43■□□□□ 0.7
Retrieved 100 of 98,524 protein–RNA pairs in 25.3 ms