Protein–RNA interactions for Protein: Q9C0I3

CCSER1, Serine-rich coiled-coil domain-containing protein 1, humanhuman

Predictions only

Length 900 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCSER1Q9C0I3 ADIRF-AS1-201ENST00000418273 2627 ntTSL 3 BASIC19.55■□□□□ 0.72
CCSER1Q9C0I3 RAB40C-205ENST00000539661 2609 ntAPPRIS P1 TSL 3 BASIC19.55■□□□□ 0.72
CCSER1Q9C0I3 PCCB-201ENST00000251654 1833 ntAPPRIS P3 TSL 1 (best) BASIC19.55■□□□□ 0.72
CCSER1Q9C0I3 DPF2-205ENST00000528416 2799 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
CCSER1Q9C0I3 PFKL-201ENST00000349048 2912 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
CCSER1Q9C0I3 PIK3R2-201ENST00000222254 4033 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
CCSER1Q9C0I3 CHTOP-201ENST00000368686 2250 ntTSL 2 BASIC19.55■□□□□ 0.72
CCSER1Q9C0I3 ZNF211-201ENST00000240731 2440 ntAPPRIS P4 TSL 2 BASIC19.55■□□□□ 0.72
CCSER1Q9C0I3 SEMA6B-201ENST00000586582 3986 ntAPPRIS P2 TSL 1 (best) BASIC19.55■□□□□ 0.72
CCSER1Q9C0I3 NEURL2-201ENST00000372518 1278 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
CCSER1Q9C0I3 IL2RG-202ENST00000374188 1432 ntTSL 5 BASIC19.55■□□□□ 0.72
CCSER1Q9C0I3 NUS1P2-201ENST00000417358 873 ntBASIC19.55■□□□□ 0.72
CCSER1Q9C0I3 PHGR1-201ENST00000448599 436 ntAPPRIS P1 TSL 5 BASIC19.55■□□□□ 0.72
CCSER1Q9C0I3 SLC2A1-204ENST00000460369 541 ntTSL 2 BASIC19.55■□□□□ 0.72
CCSER1Q9C0I3 LINC02012-201ENST00000608206 1725 ntBASIC19.55■□□□□ 0.72
CCSER1Q9C0I3 ZNF618-203ENST00000374126 3018 ntAPPRIS ALT2 TSL 1 (best) BASIC19.55■□□□□ 0.72
CCSER1Q9C0I3 RGS14-201ENST00000408923 2415 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
CCSER1Q9C0I3 IL4I1-204ENST00000595948 2407 ntAPPRIS P4 TSL 1 (best) BASIC19.55■□□□□ 0.72
CCSER1Q9C0I3 TRA2A-211ENST00000538367 2142 ntAPPRIS ALT2 TSL 2 BASIC19.55■□□□□ 0.72
CCSER1Q9C0I3 GCAT-202ENST00000323205 1656 ntTSL 2 BASIC19.55■□□□□ 0.72
CCSER1Q9C0I3 CARNS1-202ENST00000445895 3971 ntAPPRIS P1 TSL 5 BASIC19.55■□□□□ 0.72
CCSER1Q9C0I3 TNPO2-201ENST00000356861 4962 ntAPPRIS ALT1 TSL 1 (best) BASIC19.55■□□□□ 0.72
CCSER1Q9C0I3 TDRP-201ENST00000324079 3395 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
CCSER1Q9C0I3 TBXAS1-210ENST00000458722 2057 ntTSL 2 BASIC19.55■□□□□ 0.72
CCSER1Q9C0I3 UNC119-204ENST00000470125 2050 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
CCSER1Q9C0I3 TBXAS1-202ENST00000411653 1792 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
CCSER1Q9C0I3 MAPRE1-201ENST00000375571 2623 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
CCSER1Q9C0I3 CCDC188-201ENST00000439765 1475 ntAPPRIS P1 TSL 5 BASIC19.54■□□□□ 0.72
CCSER1Q9C0I3 PPARD-202ENST00000337400 2041 ntTSL 5 BASIC19.54■□□□□ 0.72
CCSER1Q9C0I3 AUTS2-201ENST00000342771 6173 ntAPPRIS P3 TSL 1 (best) BASIC19.54■□□□□ 0.72
CCSER1Q9C0I3 AL096870.2-201ENST00000565988 2108 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
CCSER1Q9C0I3 QSOX1-201ENST00000367600 2519 ntAPPRIS ALT2 TSL 1 (best) BASIC19.54■□□□□ 0.72
CCSER1Q9C0I3 CLDN4-201ENST00000340958 1831 ntAPPRIS P1 BASIC19.54■□□□□ 0.72
CCSER1Q9C0I3 PCCB-209ENST00000469217 1841 ntAPPRIS ALT2 TSL 2 BASIC19.54■□□□□ 0.72
CCSER1Q9C0I3 KDM1A-201ENST00000356634 3033 ntAPPRIS P3 TSL 1 (best) BASIC19.54■□□□□ 0.72
CCSER1Q9C0I3 OR10H5-201ENST00000308940 1132 ntAPPRIS P1 BASIC19.54■□□□□ 0.72
CCSER1Q9C0I3 FOXD3-AS1-201ENST00000418244 941 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
CCSER1Q9C0I3 BPHL-208ENST00000434640 1186 ntTSL 5 BASIC19.54■□□□□ 0.72
CCSER1Q9C0I3 RBSN-204ENST00000449050 903 ntTSL 2 BASIC19.54■□□□□ 0.72
CCSER1Q9C0I3 AC016876.1-204ENST00000573187 679 ntTSL 3 BASIC19.54■□□□□ 0.72
CCSER1Q9C0I3 IGHV3OR16-7-201ENST00000604106 360 ntBASIC19.54■□□□□ 0.72
CCSER1Q9C0I3 AL591684.3-201ENST00000605187 298 ntBASIC19.54■□□□□ 0.72
CCSER1Q9C0I3 LCE1C-202ENST00000607093 644 ntAPPRIS P2 BASIC19.54■□□□□ 0.72
CCSER1Q9C0I3 GPX4-210ENST00000611653 793 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
CCSER1Q9C0I3 MRPS30-202ENST00000507110 1678 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
CCSER1Q9C0I3 WLS-205ENST00000370976 2332 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
CCSER1Q9C0I3 C2orf81-202ENST00000612891 1902 ntAPPRIS ALT2 TSL 5 BASIC19.54■□□□□ 0.72
CCSER1Q9C0I3 P2RY6-204ENST00000393592 1515 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
CCSER1Q9C0I3 TLNRD1-201ENST00000267984 4845 ntAPPRIS P1 BASIC19.54■□□□□ 0.72
CCSER1Q9C0I3 HTR1A-201ENST00000323865 1778 ntAPPRIS P1 BASIC19.54■□□□□ 0.72
CCSER1Q9C0I3 AMZ2-203ENST00000392720 1378 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
CCSER1Q9C0I3 RAI2-203ENST00000415486 2037 ntTSL 2 BASIC19.54■□□□□ 0.72
CCSER1Q9C0I3 SKOR1-202ENST00000380035 3675 ntAPPRIS ALT2 TSL 5 BASIC19.54■□□□□ 0.72
CCSER1Q9C0I3 OTUD5-204ENST00000428668 1493 ntTSL 2 BASIC19.54■□□□□ 0.72
CCSER1Q9C0I3 DPH6-AS1-201ENST00000501169 1477 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
CCSER1Q9C0I3 PTPDC1-202ENST00000375360 4517 ntAPPRIS ALT2 TSL 1 (best) BASIC19.54■□□□□ 0.72
CCSER1Q9C0I3 SERPINB6-207ENST00000612421 1570 ntTSL 2 BASIC19.53■□□□□ 0.72
CCSER1Q9C0I3 CHAC1-204ENST00000617768 1560 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
CCSER1Q9C0I3 PRDM5-203ENST00000428209 2338 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
CCSER1Q9C0I3 PPT2-246ENST00000375137 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC19.53■□□□□ 0.72
CCSER1Q9C0I3 IRF3-202ENST00000377135 1442 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
CCSER1Q9C0I3 SIGLEC16-201ENST00000599858 1437 ntBASIC19.53■□□□□ 0.72
CCSER1Q9C0I3 CADM3-201ENST00000368124 2546 ntAPPRIS P3 TSL 1 (best) BASIC19.53■□□□□ 0.72
CCSER1Q9C0I3 CAMK2B-204ENST00000350811 2292 ntAPPRIS P4 TSL 2 BASIC19.53■□□□□ 0.72
CCSER1Q9C0I3 PROC-201ENST00000234071 1773 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
CCSER1Q9C0I3 MED16-201ENST00000269814 1199 ntTSL 5 BASIC19.53■□□□□ 0.72
CCSER1Q9C0I3 ROMO1-203ENST00000374077 422 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
CCSER1Q9C0I3 AL645608.6-201ENST00000418300 402 ntTSL 3 BASIC19.53■□□□□ 0.72
CCSER1Q9C0I3 GNB2-207ENST00000427895 1146 ntTSL 5 BASIC19.53■□□□□ 0.72
CCSER1Q9C0I3 HCG4P8-203ENST00000443049 980 ntBASIC19.53■□□□□ 0.72
CCSER1Q9C0I3 ANKRD13D-218ENST00000515828 1111 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
CCSER1Q9C0I3 AC008735.1-201ENST00000592252 802 ntTSL 5 BASIC19.53■□□□□ 0.72
CCSER1Q9C0I3 CCDC61-202ENST00000594087 1017 ntAPPRIS ALT2 TSL 5 BASIC19.53■□□□□ 0.72
CCSER1Q9C0I3 FLT3LG-206ENST00000597551 951 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
CCSER1Q9C0I3 REXO2-220ENST00000611665 1158 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
CCSER1Q9C0I3 TP53I11-223ENST00000627720 195 ntTSL 5 BASIC19.53■□□□□ 0.72
CCSER1Q9C0I3 KRT8-201ENST00000293308 1882 ntAPPRIS P1 TSL 5 BASIC19.53■□□□□ 0.72
CCSER1Q9C0I3 COL9A1-201ENST00000320755 3059 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
CCSER1Q9C0I3 ZIC1-201ENST00000282928 5241 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
CCSER1Q9C0I3 PRPF19-201ENST00000227524 2157 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
CCSER1Q9C0I3 ETV7-207ENST00000620358 1599 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
CCSER1Q9C0I3 ZSCAN10-202ENST00000538082 2350 ntTSL 4 BASIC19.52■□□□□ 0.72
CCSER1Q9C0I3 KCNQ5-212ENST00000628967 3527 ntTSL 2 BASIC19.52■□□□□ 0.72
CCSER1Q9C0I3 GNAI2-204ENST00000440628 1663 ntTSL 5 BASIC19.52■□□□□ 0.72
CCSER1Q9C0I3 SGCE-206ENST00000445866 1666 ntTSL 5 BASIC19.52■□□□□ 0.72
CCSER1Q9C0I3 B4GALT4-216ENST00000483209 2494 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
CCSER1Q9C0I3 IGSF8-201ENST00000314485 2343 ntAPPRIS P2 TSL 1 (best) BASIC19.52■□□□□ 0.72
CCSER1Q9C0I3 TRIB3-202ENST00000422053 1533 ntAPPRIS ALT2 TSL 2 BASIC19.52■□□□□ 0.72
CCSER1Q9C0I3 HAPLN3-204ENST00000562889 1547 ntTSL 5 BASIC19.52■□□□□ 0.72
CCSER1Q9C0I3 MAPK11-201ENST00000330651 2431 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
CCSER1Q9C0I3 STX2-201ENST00000261653 3331 ntAPPRIS ALT1 TSL 1 (best) BASIC19.52■□□□□ 0.72
CCSER1Q9C0I3 LRCH2-202ENST00000538422 4868 ntAPPRIS ALT2 TSL 1 (best) BASIC19.52■□□□□ 0.72
CCSER1Q9C0I3 AC012313.1-201ENST00000593393 3059 ntBASIC19.52■□□□□ 0.72
CCSER1Q9C0I3 WDFY4-202ENST00000360890 2193 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
CCSER1Q9C0I3 PRORSD1P-202ENST00000563365 2154 ntBASIC19.52■□□□□ 0.72
CCSER1Q9C0I3 NPRL2-201ENST00000232501 1700 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
CCSER1Q9C0I3 PSMA7-201ENST00000370858 925 ntTSL 2 BASIC19.52■□□□□ 0.72
CCSER1Q9C0I3 PSMA7-203ENST00000370873 996 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
CCSER1Q9C0I3 EDN3-203ENST00000371025 1153 ntAPPRIS ALT2 TSL 1 (best) BASIC19.52■□□□□ 0.72
CCSER1Q9C0I3 TLE1-202ENST00000376484 666 ntTSL 3 BASIC19.52■□□□□ 0.72
Retrieved 100 of 98,524 protein–RNA pairs in 41.6 ms