Protein–RNA interactions for Protein: Q9BT76

UPK3B, Uroplakin-3b, humanhuman

Predictions only

Length 320 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UPK3BQ9BT76 ACP6-201ENST00000392988 1555 ntTSL 1 (best) BASIC12.21□□□□□ -0.46
UPK3BQ9BT76 RMND5B-201ENST00000313386 1929 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.46
UPK3BQ9BT76 CLK2-202ENST00000361168 1934 ntAPPRIS P3 TSL 1 (best) BASIC12.21□□□□□ -0.46
UPK3BQ9BT76 CSK-202ENST00000439220 1900 ntAPPRIS P1 TSL 2 BASIC12.21□□□□□ -0.46
UPK3BQ9BT76 AC002310.5-201ENST00000569360 1515 ntAPPRIS P1 TSL 2 BASIC12.21□□□□□ -0.46
UPK3BQ9BT76 PYCR2-208ENST00000612039 1549 ntTSL 3 BASIC12.21□□□□□ -0.46
UPK3BQ9BT76 PYCR2-209ENST00000612651 1538 ntTSL 5 BASIC12.21□□□□□ -0.46
UPK3BQ9BT76 SMARCA4-215ENST00000590574 5282 ntAPPRIS ALT1 TSL 5 BASIC12.21□□□□□ -0.46
UPK3BQ9BT76 CEBPG-201ENST00000284000 4109 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.46
UPK3BQ9BT76 ZNF623-203ENST00000526926 2612 ntAPPRIS ALT2 TSL 2 BASIC12.21□□□□□ -0.46
UPK3BQ9BT76 DNAJC28-203ENST00000402202 1480 ntAPPRIS P1 TSL 5 BASIC12.21□□□□□ -0.46
UPK3BQ9BT76 SLC22A1-203ENST00000457470 1452 ntTSL 5 BASIC12.21□□□□□ -0.46
UPK3BQ9BT76 AC002310.2-202ENST00000492040 1488 ntTSL 1 (best) BASIC12.21□□□□□ -0.46
UPK3BQ9BT76 PCDH19-202ENST00000373034 9756 ntAPPRIS ALT2 TSL 1 (best) BASIC12.2□□□□□ -0.46
UPK3BQ9BT76 JKAMP-202ENST00000356057 2524 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
UPK3BQ9BT76 NOMO2-211ENST00000621364 3921 ntAPPRIS ALT2 TSL 1 (best) BASIC12.2□□□□□ -0.46
UPK3BQ9BT76 PPA2-202ENST00000348706 1414 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
UPK3BQ9BT76 GABRG3-206ENST00000555083 1405 ntTSL 2 BASIC12.2□□□□□ -0.46
UPK3BQ9BT76 COA5-201ENST00000328709 1754 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
UPK3BQ9BT76 SPNS3-201ENST00000355530 2133 ntAPPRIS P1 TSL 2 BASIC12.2□□□□□ -0.46
UPK3BQ9BT76 AC005329.3-201ENST00000626781 1366 ntTSL 5 BASIC12.2□□□□□ -0.46
UPK3BQ9BT76 SMARCC2-201ENST00000267064 4076 ntAPPRIS P4 TSL 1 (best) BASIC12.2□□□□□ -0.46
UPK3BQ9BT76 C11orf58-201ENST00000228136 2049 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
UPK3BQ9BT76 LRRC43-201ENST00000339777 2028 ntAPPRIS P2 TSL 5 BASIC12.2□□□□□ -0.46
UPK3BQ9BT76 PYCR3-201ENST00000220966 2678 ntAPPRIS P2 TSL 1 (best) BASIC12.2□□□□□ -0.46
UPK3BQ9BT76 TMEM263-204ENST00000548125 3349 ntAPPRIS P1 TSL 2 BASIC12.2□□□□□ -0.46
UPK3BQ9BT76 PEX14-201ENST00000356607 1985 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
UPK3BQ9BT76 AL096828.2-201ENST00000567259 1965 ntBASIC12.2□□□□□ -0.46
UPK3BQ9BT76 PSAP-205ENST00000610929 1969 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
UPK3BQ9BT76 CCNI2-204ENST00000614847 2642 ntAPPRIS ALT2 TSL 1 (best) BASIC12.2□□□□□ -0.46
UPK3BQ9BT76 ADGRB2-206ENST00000398556 4879 ntAPPRIS ALT2 TSL 5 BASIC12.2□□□□□ -0.46
UPK3BQ9BT76 MANSC1-202ENST00000535902 5831 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
UPK3BQ9BT76 SIL1-202ENST00000394817 1923 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
UPK3BQ9BT76 MFSD2A-203ENST00000420632 1914 ntTSL 2 BASIC12.2□□□□□ -0.46
UPK3BQ9BT76 MUC1-204ENST00000343256 648 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
UPK3BQ9BT76 ASGR1-202ENST00000380920 944 ntTSL 3 BASIC12.2□□□□□ -0.46
UPK3BQ9BT76 EXOSC3-202ENST00000396521 768 ntTSL 2 BASIC12.2□□□□□ -0.46
UPK3BQ9BT76 MYL6-203ENST00000536128 1221 ntTSL 2 BASIC12.2□□□□□ -0.46
UPK3BQ9BT76 AL662844.1-201ENST00000546340 181 ntBASIC12.2□□□□□ -0.46
UPK3BQ9BT76 CARHSP1-205ENST00000562843 843 ntTSL 2 BASIC12.2□□□□□ -0.46
UPK3BQ9BT76 AC012645.3-201ENST00000568506 470 ntTSL 3 BASIC12.2□□□□□ -0.46
UPK3BQ9BT76 RLN3-202ENST00000585987 541 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
UPK3BQ9BT76 AC064862.7-201ENST00000604520 867 ntBASIC12.2□□□□□ -0.46
UPK3BQ9BT76 AC116407.2-201ENST00000613639 860 ntBASIC12.2□□□□□ -0.46
UPK3BQ9BT76 PCOLCE-AS1-201ENST00000442166 2537 ntTSL 2 BASIC12.2□□□□□ -0.46
UPK3BQ9BT76 AC242426.3-201ENST00000440377 1571 ntTSL 2 BASIC12.2□□□□□ -0.46
UPK3BQ9BT76 SERPINB6-207ENST00000612421 1570 ntTSL 2 BASIC12.2□□□□□ -0.46
UPK3BQ9BT76 NARFL-218ENST00000568545 2486 ntTSL 2 BASIC12.2□□□□□ -0.46
UPK3BQ9BT76 PLCB2-201ENST00000260402 4616 ntAPPRIS P3 TSL 2 BASIC12.2□□□□□ -0.46
UPK3BQ9BT76 ZCWPW1-201ENST00000360951 2110 ntAPPRIS ALT2 TSL 2 BASIC12.2□□□□□ -0.46
UPK3BQ9BT76 TCAF2-203ENST00000425618 2448 ntTSL 2 BASIC12.2□□□□□ -0.46
UPK3BQ9BT76 PHACTR3-204ENST00000371015 2728 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
UPK3BQ9BT76 SCARB1-203ENST00000415380 2731 ntTSL 2 BASIC12.2□□□□□ -0.46
UPK3BQ9BT76 ARHGAP8-201ENST00000336963 1487 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
UPK3BQ9BT76 GAS7-203ENST00000432992 4970 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
UPK3BQ9BT76 GCH1-207ENST00000622544 2923 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
UPK3BQ9BT76 TPGS2-219ENST00000593035 1727 ntAPPRIS ALT2 TSL 2 BASIC12.2□□□□□ -0.46
UPK3BQ9BT76 PALM3-201ENST00000340790 2262 ntAPPRIS P2 TSL 5 BASIC12.2□□□□□ -0.46
UPK3BQ9BT76 FCMR-201ENST00000367091 1950 ntAPPRIS P3 TSL 1 (best) BASIC12.19□□□□□ -0.46
UPK3BQ9BT76 C19orf48-202ENST00000391812 1666 ntAPPRIS P1 TSL 2 BASIC12.19□□□□□ -0.46
UPK3BQ9BT76 TBC1D10C-209ENST00000542590 1659 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
UPK3BQ9BT76 MED9-201ENST00000268711 2228 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
UPK3BQ9BT76 CPEB2-204ENST00000382401 5509 ntAPPRIS ALT2 TSL 1 (best) BASIC12.19□□□□□ -0.46
UPK3BQ9BT76 CABP1-201ENST00000288616 1369 ntAPPRIS P4 TSL 1 (best) BASIC12.19□□□□□ -0.46
UPK3BQ9BT76 PORCN-205ENST00000367574 1368 ntAPPRIS ALT1 TSL 1 (best) BASIC12.19□□□□□ -0.46
UPK3BQ9BT76 HSPA1A-201ENST00000375651 2483 ntAPPRIS P1 BASIC12.19□□□□□ -0.46
UPK3BQ9BT76 AQP1-204ENST00000441328 2487 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
UPK3BQ9BT76 PORCN-214ENST00000537758 1371 ntAPPRIS ALT1 TSL 1 (best) BASIC12.19□□□□□ -0.46
UPK3BQ9BT76 HSPB9-201ENST00000565659 1922 ntAPPRIS P1 BASIC12.19□□□□□ -0.46
UPK3BQ9BT76 GFI1B-208ENST00000636263 1604 ntTSL 5 BASIC12.19□□□□□ -0.46
UPK3BQ9BT76 ST6GALNAC6-202ENST00000373141 2424 ntAPPRIS ALT1 TSL 2 BASIC12.19□□□□□ -0.46
UPK3BQ9BT76 POR-209ENST00000439269 1858 ntTSL 2 BASIC12.19□□□□□ -0.46
UPK3BQ9BT76 IGSF9-206ENST00000611023 2663 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
UPK3BQ9BT76 ITPKB-201ENST00000272117 5822 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
UPK3BQ9BT76 TRABD2A-202ENST00000409133 1554 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
UPK3BQ9BT76 SEH1L-202ENST00000399892 1846 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
UPK3BQ9BT76 KCNH1-210ENST00000640044 1818 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
UPK3BQ9BT76 RBM7-201ENST00000375490 2064 ntAPPRIS ALT1 TSL 1 (best) BASIC12.19□□□□□ -0.46
UPK3BQ9BT76 BFSP1-205ENST00000536626 2075 ntTSL 2 BASIC12.19□□□□□ -0.46
UPK3BQ9BT76 AJUBA-202ENST00000361265 2569 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
UPK3BQ9BT76 NXPH2-201ENST00000272641 1052 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
UPK3BQ9BT76 MSI2-201ENST00000284073 6364 ntAPPRIS P4 TSL 1 (best) BASIC12.19□□□□□ -0.46
UPK3BQ9BT76 ZNHIT1-201ENST00000305105 1225 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
UPK3BQ9BT76 TMEM234-202ENST00000344461 721 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
UPK3BQ9BT76 CD99-205ENST00000381192 1245 ntAPPRIS P3 TSL 1 (best) BASIC12.19□□□□□ -0.46
UPK3BQ9BT76 NAT6-202ENST00000417393 1163 ntAPPRIS ALT2 TSL 1 (best) BASIC12.19□□□□□ -0.46
UPK3BQ9BT76 AQP12A-202ENST00000429564 1110 ntAPPRIS P5 TSL 5 BASIC12.19□□□□□ -0.46
UPK3BQ9BT76 AC122714.2-201ENST00000502787 707 ntBASIC12.19□□□□□ -0.46
UPK3BQ9BT76 MCCC2-205ENST00000509358 1214 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
UPK3BQ9BT76 AC106795.1-205ENST00000512851 1056 ntBASIC12.19□□□□□ -0.46
UPK3BQ9BT76 MIF4GD-205ENST00000578305 569 ntTSL 5 BASIC12.19□□□□□ -0.46
UPK3BQ9BT76 AC104692.2-201ENST00000603054 253 ntBASIC12.19□□□□□ -0.46
UPK3BQ9BT76 AL031008.1-201ENST00000619963 541 ntBASIC12.19□□□□□ -0.46
UPK3BQ9BT76 VPS51-217ENST00000639871 243 ntTSL 5 BASIC12.19□□□□□ -0.46
UPK3BQ9BT76 TSR2-201ENST00000375151 1534 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
UPK3BQ9BT76 STARD7-AS1-202ENST00000446816 1527 ntTSL 2 BASIC12.19□□□□□ -0.46
UPK3BQ9BT76 LBHD1-210ENST00000532208 1508 ntAPPRIS P2 TSL 5 BASIC12.19□□□□□ -0.46
UPK3BQ9BT76 SSUH2-202ENST00000341795 1799 ntAPPRIS P3 TSL 1 (best) BASIC12.19□□□□□ -0.46
UPK3BQ9BT76 NSUN5P2-201ENST00000388955 1789 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
UPK3BQ9BT76 ZFP90-203ENST00000563169 2512 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Retrieved 100 of 98,524 protein–RNA pairs in 36.5 ms