Protein–RNA interactions for Protein: Q96T58

SPEN, Msx2-interacting protein, humanhuman

Known RBP Predictions only

Length 3,664 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SPENQ96T58 NFATC1-206ENST00000542384 2142 ntAPPRIS ALT2 TSL 1 (best) BASIC15.63■□□□□ 0.09
SPENQ96T58 FAM207CP-201ENST00000443486 507 ntBASIC15.63■□□□□ 0.09
SPENQ96T58 SLC25A6P2-201ENST00000497974 877 ntBASIC15.63■□□□□ 0.09
SPENQ96T58 TIMM13-202ENST00000591871 631 ntTSL 5 BASIC15.63■□□□□ 0.09
SPENQ96T58 LINC00315-201ENST00000441947 2323 ntTSL 5 BASIC15.63■□□□□ 0.09
SPENQ96T58 BTNL9-202ENST00000376841 1626 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
SPENQ96T58 SCARF1-202ENST00000348987 2619 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
SPENQ96T58 NPRL2-201ENST00000232501 1700 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
SPENQ96T58 LGMN-211ENST00000555699 1728 ntTSL 5 BASIC15.62■□□□□ 0.09
SPENQ96T58 AC099508.1-201ENST00000499110 1666 ntTSL 4 BASIC15.62■□□□□ 0.09
SPENQ96T58 EFS-201ENST00000216733 3118 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
SPENQ96T58 TOM1L2-203ENST00000395739 1766 ntTSL 2 BASIC15.62■□□□□ 0.09
SPENQ96T58 GUCA2A-201ENST00000357001 569 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
SPENQ96T58 FAM86GP-201ENST00000448322 971 ntBASIC15.62■□□□□ 0.09
SPENQ96T58 TSPY16P-201ENST00000449843 468 ntBASIC15.62■□□□□ 0.09
SPENQ96T58 ITPA-203ENST00000455664 729 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
SPENQ96T58 PRKAG2-AS1-202ENST00000467458 1064 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
SPENQ96T58 GRAMD2B-218ENST00000542322 2977 ntTSL 2 BASIC15.62■□□□□ 0.09
SPENQ96T58 NUBP2-208ENST00000565987 1049 ntTSL 5 BASIC15.62■□□□□ 0.09
SPENQ96T58 ZGPAT-202ENST00000355969 1871 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
SPENQ96T58 TMEM177-201ENST00000272521 1394 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
SPENQ96T58 HDAC10-201ENST00000216271 2687 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
SPENQ96T58 CCDC17-209ENST00000528266 2181 ntAPPRIS P3 TSL 2 BASIC15.62■□□□□ 0.09
SPENQ96T58 LSM12-201ENST00000293406 2308 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
SPENQ96T58 TLK2-202ENST00000343388 3227 ntAPPRIS ALT1 TSL 1 (best) BASIC15.62■□□□□ 0.09
SPENQ96T58 LRRC4B-201ENST00000389201 2958 ntAPPRIS P1 TSL 2 BASIC15.62■□□□□ 0.09
SPENQ96T58 APP-203ENST00000354192 3167 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
SPENQ96T58 PRPS1-203ENST00000372428 1748 ntTSL 2 BASIC15.62■□□□□ 0.09
SPENQ96T58 CD37-201ENST00000323906 1265 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
SPENQ96T58 CTDSP1-204ENST00000443891 1109 ntTSL 3 BASIC15.62■□□□□ 0.09
SPENQ96T58 KLF2P3-201ENST00000451977 1087 ntBASIC15.62■□□□□ 0.09
SPENQ96T58 NAA50-208ENST00000497255 789 ntTSL 5 BASIC15.62■□□□□ 0.09
SPENQ96T58 AC123777.1-201ENST00000534827 1247 ntTSL 3 BASIC15.62■□□□□ 0.09
SPENQ96T58 AC012645.3-201ENST00000568506 470 ntTSL 3 BASIC15.62■□□□□ 0.09
SPENQ96T58 PLD3-207ENST00000409735 2140 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
SPENQ96T58 CCKBR-203ENST00000525462 2138 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
SPENQ96T58 TTLL10-203ENST00000379290 2283 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
SPENQ96T58 SLC44A3-201ENST00000271227 2388 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
SPENQ96T58 TADA3-201ENST00000301964 2355 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
SPENQ96T58 ANXA4-202ENST00000409920 1414 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
SPENQ96T58 AC073283.1-201ENST00000421759 860 ntTSL 3 BASIC15.62■□□□□ 0.09
SPENQ96T58 AC055876.3-201ENST00000431496 288 ntBASIC15.62■□□□□ 0.09
SPENQ96T58 SPDYE14P-201ENST00000442619 822 ntBASIC15.62■□□□□ 0.09
SPENQ96T58 LINC00595-207ENST00000476909 792 ntTSL 2 BASIC15.62■□□□□ 0.09
SPENQ96T58 TERF1P3-201ENST00000505638 1227 ntBASIC15.62■□□□□ 0.09
SPENQ96T58 AC138649.4-201ENST00000612222 287 ntBASIC15.62■□□□□ 0.09
SPENQ96T58 RAB37-208ENST00000402449 1560 ntAPPRIS P3 TSL 2 BASIC15.62■□□□□ 0.09
SPENQ96T58 DNM1-202ENST00000372923 3244 ntAPPRIS P3 TSL 1 (best) BASIC15.61■□□□□ 0.09
SPENQ96T58 AC133548.2-201ENST00000568567 2605 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
SPENQ96T58 KMT2E-207ENST00000476671 2523 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
SPENQ96T58 YIPF2-204ENST00000586748 1550 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
SPENQ96T58 AC006116.8-202ENST00000587620 1550 ntBASIC15.61■□□□□ 0.09
SPENQ96T58 PLXNB2-214ENST00000614805 1387 ntTSL 5 BASIC15.61■□□□□ 0.09
SPENQ96T58 NKTR-203ENST00000442970 646 ntTSL 2 BASIC15.61■□□□□ 0.09
SPENQ96T58 INGX-202ENST00000489074 768 ntBASIC15.61■□□□□ 0.09
SPENQ96T58 SBDS-205ENST00000617799 953 ntAPPRIS ALT1 TSL 5 BASIC15.61■□□□□ 0.09
SPENQ96T58 PIF1-201ENST00000268043 2687 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
SPENQ96T58 SELENOF-208ENST00000616787 1835 ntAPPRIS ALT1 TSL 5 BASIC15.61■□□□□ 0.09
SPENQ96T58 ROBO3-221ENST00000543966 1520 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
SPENQ96T58 ZNF131-206ENST00000505606 3209 ntAPPRIS P1 TSL 5 BASIC15.61■□□□□ 0.09
SPENQ96T58 PNLDC1-207ENST00000610273 1940 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
SPENQ96T58 GADD45B-201ENST00000215631 1373 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
SPENQ96T58 MAP4K1-203ENST00000586296 1363 ntTSL 5 BASIC15.61■□□□□ 0.09
SPENQ96T58 LMLN-204ENST00000420910 2423 ntAPPRIS P2 TSL 1 (best) BASIC15.61■□□□□ 0.09
SPENQ96T58 ZNF696-201ENST00000330143 2795 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
SPENQ96T58 LIM2-201ENST00000221973 983 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
SPENQ96T58 EIF5A-201ENST00000336452 1256 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
SPENQ96T58 HNRNPFP1-201ENST00000391730 1133 ntBASIC15.61■□□□□ 0.09
SPENQ96T58 HRAS-204ENST00000417302 1233 ntTSL 5 BASIC15.61■□□□□ 0.09
SPENQ96T58 LINC01503-203ENST00000436710 901 ntTSL 3 BASIC15.61■□□□□ 0.09
SPENQ96T58 CRB3P1-201ENST00000449338 276 ntBASIC15.61■□□□□ 0.09
SPENQ96T58 HRAS-205ENST00000451590 1151 ntAPPRIS P1 TSL 2 BASIC15.61■□□□□ 0.09
SPENQ96T58 BLOC1S6-202ENST00000562384 494 ntTSL 4 BASIC15.61■□□□□ 0.09
SPENQ96T58 GRIFIN-202ENST00000614228 461 ntAPPRIS P1 TSL 5 BASIC15.61■□□□□ 0.09
SPENQ96T58 ZNF133-211ENST00000538547 2245 ntTSL 2 BASIC15.61■□□□□ 0.09
SPENQ96T58 SIL1-201ENST00000265195 1895 ntAPPRIS P1 TSL 5 BASIC15.61■□□□□ 0.09
SPENQ96T58 EIF3B-201ENST00000360876 3055 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
SPENQ96T58 DYRK1B-203ENST00000430012 2007 ntAPPRIS ALT1 TSL 5 BASIC15.61■□□□□ 0.09
SPENQ96T58 CHPF-201ENST00000243776 3013 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
SPENQ96T58 PPAN-P2RY11-201ENST00000393796 2385 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
SPENQ96T58 ERMARD-210ENST00000588451 2146 ntTSL 5 BASIC15.61■□□□□ 0.09
SPENQ96T58 AC003669.1-201ENST00000334569 611 ntBASIC15.61■□□□□ 0.09
SPENQ96T58 LINC00982-205ENST00000420957 435 ntBASIC15.61■□□□□ 0.09
SPENQ96T58 AL590235.2-202ENST00000602543 594 ntTSL 5 BASIC15.61■□□□□ 0.09
SPENQ96T58 RAX2-201ENST00000555633 2414 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
SPENQ96T58 AC007613.1-201ENST00000572811 2597 ntBASIC15.61■□□□□ 0.09
SPENQ96T58 MEN1-203ENST00000337652 3162 ntAPPRIS P3 TSL 5 BASIC15.6■□□□□ 0.09
SPENQ96T58 ZDHHC11-209ENST00000511539 1303 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
SPENQ96T58 ZDHHC11B-204ENST00000622126 1301 ntTSL 5 BASIC15.6■□□□□ 0.09
SPENQ96T58 AC063926.2-201ENST00000623766 1308 ntBASIC15.6■□□□□ 0.09
SPENQ96T58 PRSS36-201ENST00000268281 2840 ntAPPRIS P3 TSL 1 (best) BASIC15.6■□□□□ 0.09
SPENQ96T58 LTV1-201ENST00000367576 1847 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
SPENQ96T58 MIR943-201ENST00000401286 94 ntBASIC15.6■□□□□ 0.09
SPENQ96T58 TAS2R41-201ENST00000408916 924 ntAPPRIS P1 BASIC15.6■□□□□ 0.09
SPENQ96T58 SPINK2-203ENST00000506738 763 ntAPPRIS ALT2 TSL 2 BASIC15.6■□□□□ 0.09
SPENQ96T58 AL132711.1-201ENST00000557546 722 ntTSL 3 BASIC15.6■□□□□ 0.09
SPENQ96T58 AC098484.3-202ENST00000603943 1011 ntAPPRIS P5 TSL 5 BASIC15.6■□□□□ 0.09
SPENQ96T58 TMEM235-201ENST00000374946 2409 ntTSL 5 BASIC15.6■□□□□ 0.09
SPENQ96T58 BCS1L-212ENST00000439945 1483 ntAPPRIS P1 TSL 5 BASIC15.6■□□□□ 0.09
SPENQ96T58 ZCWPW1-201ENST00000360951 2110 ntAPPRIS ALT2 TSL 2 BASIC15.6■□□□□ 0.09
Retrieved 100 of 98,524 protein–RNA pairs in 50 ms