Protein–RNA interactions for Protein: Q96S21

RAB40C, Ras-related protein Rab-40C, humanhuman

Predictions only

Length 281 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40CQ96S21 CADPS2-204ENST00000412584 4308 ntAPPRIS P2 TSL 1 (best) BASIC14.22□□□□□ -0.13
RAB40CQ96S21 BLOC1S5-202ENST00000397457 2684 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
RAB40CQ96S21 RRM2B-201ENST00000251810 4931 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
RAB40CQ96S21 CTSB-228ENST00000533455 2009 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
RAB40CQ96S21 U73166.1-201ENST00000439898 2625 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
RAB40CQ96S21 ARFGAP1-201ENST00000353546 2776 ntAPPRIS P4 TSL 1 (best) BASIC14.22□□□□□ -0.13
RAB40CQ96S21 AL162727.3-201ENST00000635661 2787 ntBASIC14.22□□□□□ -0.13
RAB40CQ96S21 MPIG6B-204ENST00000375809 2396 ntAPPRIS ALT2 TSL 1 (best) BASIC14.22□□□□□ -0.13
RAB40CQ96S21 ACTG1-201ENST00000331925 1994 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
RAB40CQ96S21 TNKS-211ENST00000520408 1964 ntTSL 2 BASIC14.22□□□□□ -0.13
RAB40CQ96S21 AC027312.1-201ENST00000523591 1571 ntTSL 5 BASIC14.22□□□□□ -0.13
RAB40CQ96S21 UBE2E1-202ENST00000346855 1398 ntTSL 3 BASIC14.22□□□□□ -0.13
RAB40CQ96S21 CTDP1-201ENST00000075430 3538 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
RAB40CQ96S21 PCNP-201ENST00000265260 2342 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
RAB40CQ96S21 CLPTM1-203ENST00000546079 2342 ntTSL 2 BASIC14.21□□□□□ -0.13
RAB40CQ96S21 PKDREJ-201ENST00000253255 7693 ntAPPRIS P1 BASIC14.21□□□□□ -0.13
RAB40CQ96S21 LINC02012-201ENST00000608206 1725 ntBASIC14.21□□□□□ -0.13
RAB40CQ96S21 MAGED4-211ENST00000599522 2669 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
RAB40CQ96S21 LINC00634-201ENST00000381348 1510 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
RAB40CQ96S21 B4GALT4-216ENST00000483209 2494 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
RAB40CQ96S21 PFN2-201ENST00000239940 2261 ntAPPRIS P3 TSL 1 (best) BASIC14.21□□□□□ -0.13
RAB40CQ96S21 TXNL1-211ENST00000590954 1339 ntAPPRIS P1 TSL 2 BASIC14.21□□□□□ -0.13
RAB40CQ96S21 CHGA-201ENST00000216492 2063 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
RAB40CQ96S21 SLC35G2-202ENST00000446465 2060 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
RAB40CQ96S21 CTNNB1-210ENST00000453024 2841 ntTSL 2 BASIC14.21□□□□□ -0.13
RAB40CQ96S21 KDM4B-203ENST00000536461 5027 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
RAB40CQ96S21 KCNC1-202ENST00000379472 7965 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
RAB40CQ96S21 AP1S2-201ENST00000329235 2237 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
RAB40CQ96S21 KLC1-212ENST00000553286 3135 ntTSL 5 BASIC14.21□□□□□ -0.13
RAB40CQ96S21 SLC18B1-201ENST00000275227 2368 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
RAB40CQ96S21 ABHD14B-203ENST00000395008 1818 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
RAB40CQ96S21 CXCL3-201ENST00000296026 1075 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
RAB40CQ96S21 LIME1-201ENST00000309546 1178 ntAPPRIS P3 TSL 1 (best) BASIC14.21□□□□□ -0.13
RAB40CQ96S21 OARD1-201ENST00000373154 1129 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
RAB40CQ96S21 AC115618.1-201ENST00000376775 549 ntTSL 3 BASIC14.21□□□□□ -0.13
RAB40CQ96S21 MIR718-201ENST00000390190 70 ntBASIC14.21□□□□□ -0.13
RAB40CQ96S21 CCDC74B-203ENST00000409128 789 ntAPPRIS ALT2 TSL 2 BASIC14.21□□□□□ -0.13
RAB40CQ96S21 AL161452.1-201ENST00000415062 1117 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
RAB40CQ96S21 AC005104.2-201ENST00000427818 678 ntBASIC14.21□□□□□ -0.13
RAB40CQ96S21 SGO1-AS1-202ENST00000448208 819 ntTSL 3 BASIC14.21□□□□□ -0.13
RAB40CQ96S21 AL445645.1-201ENST00000451318 1019 ntTSL 2 BASIC14.21□□□□□ -0.13
RAB40CQ96S21 AC008550.1-201ENST00000511500 884 ntBASIC14.21□□□□□ -0.13
RAB40CQ96S21 AC117500.4-201ENST00000542797 617 ntTSL 3 BASIC14.21□□□□□ -0.13
RAB40CQ96S21 GCHFR-205ENST00000559932 695 ntTSL 2 BASIC14.21□□□□□ -0.13
RAB40CQ96S21 AL354712.1-201ENST00000563570 477 ntTSL 3 BASIC14.21□□□□□ -0.13
RAB40CQ96S21 AP005263.1-201ENST00000579126 914 ntTSL 2 BASIC14.21□□□□□ -0.13
RAB40CQ96S21 PTGIR-204ENST00000596260 1009 ntTSL 2 BASIC14.21□□□□□ -0.13
RAB40CQ96S21 Z99916.2-201ENST00000604037 246 ntBASIC14.21□□□□□ -0.13
RAB40CQ96S21 AL513523.10-201ENST00000623024 1186 ntAPPRIS P1 TSL 5 BASIC14.21□□□□□ -0.13
RAB40CQ96S21 AL049637.2-201ENST00000641778 930 ntBASIC14.21□□□□□ -0.13
RAB40CQ96S21 GCLM-201ENST00000370238 4857 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
RAB40CQ96S21 ANTXRL-206ENST00000622632 1964 ntAPPRIS ALT2 TSL 5 BASIC14.21□□□□□ -0.13
RAB40CQ96S21 FBXW9-203ENST00000587955 1437 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
RAB40CQ96S21 SHISA6-202ENST00000409168 7262 ntAPPRIS ALT2 TSL 1 (best) BASIC14.21□□□□□ -0.13
RAB40CQ96S21 AMN1-201ENST00000281471 2110 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
RAB40CQ96S21 CCDC142-201ENST00000290418 2835 ntAPPRIS P2 TSL 2 BASIC14.21□□□□□ -0.14
RAB40CQ96S21 AFTPH-202ENST00000238856 4040 ntAPPRIS P3 TSL 1 (best) BASIC14.21□□□□□ -0.14
RAB40CQ96S21 THNSL2-203ENST00000377254 1560 ntTSL 2 BASIC14.21□□□□□ -0.14
RAB40CQ96S21 ASB10-202ENST00000377867 1738 ntTSL 2 BASIC14.21□□□□□ -0.14
RAB40CQ96S21 C1orf115-201ENST00000294889 3413 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
RAB40CQ96S21 AL353608.3-201ENST00000603200 2211 ntTSL 5 BASIC14.21□□□□□ -0.14
RAB40CQ96S21 PTHLH-205ENST00000535992 1891 ntAPPRIS P3 TSL 1 (best) BASIC14.21□□□□□ -0.14
RAB40CQ96S21 PLPP4-202ENST00000398250 1521 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
RAB40CQ96S21 HMBS-203ENST00000442944 1548 ntTSL 5 BASIC14.2□□□□□ -0.14
RAB40CQ96S21 PTPRN2-201ENST00000389413 4723 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
RAB40CQ96S21 PDX1-201ENST00000381033 2501 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
RAB40CQ96S21 KRT28-201ENST00000306658 1685 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
RAB40CQ96S21 LSP1-201ENST00000311604 1699 ntAPPRIS P4 TSL 1 (best) BASIC14.2□□□□□ -0.14
RAB40CQ96S21 CCDC187-205ENST00000638797 10126 ntAPPRIS ALT2 TSL 5 BASIC14.2□□□□□ -0.14
RAB40CQ96S21 FAM222B-211ENST00000582266 2613 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
RAB40CQ96S21 HSDL1-202ENST00000434463 1493 ntTSL 2 BASIC14.2□□□□□ -0.14
RAB40CQ96S21 TRPC6-202ENST00000348423 2448 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
RAB40CQ96S21 VANGL2-201ENST00000368061 5340 ntAPPRIS P1 TSL 2 BASIC14.2□□□□□ -0.14
RAB40CQ96S21 SCYL1-214ENST00000533862 2570 ntTSL 5 BASIC14.2□□□□□ -0.14
RAB40CQ96S21 SLAIN2-201ENST00000264313 6299 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
RAB40CQ96S21 PPP1R16B-201ENST00000299824 6251 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
RAB40CQ96S21 TGDS-201ENST00000261296 1905 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
RAB40CQ96S21 KRT18P65-201ENST00000439811 1286 ntBASIC14.2□□□□□ -0.14
RAB40CQ96S21 NDUFB2-203ENST00000461457 559 ntTSL 3 BASIC14.2□□□□□ -0.14
RAB40CQ96S21 AC113404.2-201ENST00000507884 177 ntBASIC14.2□□□□□ -0.14
RAB40CQ96S21 CXCL2-202ENST00000508487 1218 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
RAB40CQ96S21 AF131216.3-201ENST00000525867 1099 ntTSL 2 BASIC14.2□□□□□ -0.14
RAB40CQ96S21 AC004803.1-203ENST00000539259 501 ntTSL 2 BASIC14.2□□□□□ -0.14
RAB40CQ96S21 LINC02167-201ENST00000562769 594 ntTSL 3 BASIC14.2□□□□□ -0.14
RAB40CQ96S21 AP005242.2-201ENST00000580065 1175 ntBASIC14.2□□□□□ -0.14
RAB40CQ96S21 AL512625.1-201ENST00000305709 2541 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
RAB40CQ96S21 CRYL1-202ENST00000382812 1581 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
RAB40CQ96S21 NTRK2-205ENST00000376208 8178 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
RAB40CQ96S21 TBC1D9B-202ENST00000356834 5173 ntAPPRIS ALT2 TSL 1 (best) BASIC14.2□□□□□ -0.14
RAB40CQ96S21 MFSD11-207ENST00000586622 2952 ntAPPRIS P1 TSL 5 BASIC14.2□□□□□ -0.14
RAB40CQ96S21 PSMD11-202ENST00000457654 2159 ntAPPRIS P1 TSL 2 BASIC14.2□□□□□ -0.14
RAB40CQ96S21 LINC00937-205ENST00000538304 2157 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
RAB40CQ96S21 ATAD3A-207ENST00000536055 2332 ntTSL 2 BASIC14.2□□□□□ -0.14
RAB40CQ96S21 TPPP-201ENST00000360578 6022 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
RAB40CQ96S21 DNAJA3-201ENST00000262375 2763 ntAPPRIS P3 TSL 1 (best) BASIC14.2□□□□□ -0.14
RAB40CQ96S21 STK24-203ENST00000397517 4578 ntTSL 2 BASIC14.2□□□□□ -0.14
RAB40CQ96S21 NCF1B-201ENST00000423083 1516 ntTSL 2 BASIC14.2□□□□□ -0.14
RAB40CQ96S21 CCDC120-202ENST00000496529 2415 ntAPPRIS P3 TSL 2 BASIC14.2□□□□□ -0.14
RAB40CQ96S21 CELF6-201ENST00000287202 3345 ntAPPRIS P3 TSL 1 (best) BASIC14.2□□□□□ -0.14
RAB40CQ96S21 CPEB2-203ENST00000382395 5524 ntAPPRIS ALT2 TSL 1 (best) BASIC14.19□□□□□ -0.14
Retrieved 100 of 98,524 protein–RNA pairs in 41.9 ms