Protein–RNA interactions for Protein: Q96PY6

NEK1, Serine/threonine-protein kinase Nek1, humanhuman

Predictions only

Length 1,258 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NEK1Q96PY6 SLCO4A1-202ENST00000370507 2665 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
NEK1Q96PY6 MOGAT1-201ENST00000446656 1048 ntAPPRIS P1 TSL 5 BASIC20.7■□□□□ 0.9
NEK1Q96PY6 IMMP2L-207ENST00000452895 833 ntAPPRIS P1 TSL 5 BASIC20.7■□□□□ 0.9
NEK1Q96PY6 LINC02237-202ENST00000521904 477 ntTSL 3 BASIC20.7■□□□□ 0.9
NEK1Q96PY6 C1QTNF1-205ENST00000578229 1294 ntTSL 4 BASIC20.7■□□□□ 0.9
NEK1Q96PY6 NDUFA6-204ENST00000617763 1183 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
NEK1Q96PY6 ASAH1-255ENST00000637638 699 ntTSL 2 BASIC20.7■□□□□ 0.9
NEK1Q96PY6 LINC00271-201ENST00000421378 1580 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
NEK1Q96PY6 FBXO7-201ENST00000266087 2195 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
NEK1Q96PY6 SLX1A-SULT1A3-202ENST00000565342 2195 ntTSL 2 BASIC20.7■□□□□ 0.9
NEK1Q96PY6 CCM2-207ENST00000475551 2471 ntAPPRIS ALT2 TSL 2 BASIC20.7■□□□□ 0.9
NEK1Q96PY6 SH2D3C-213ENST00000629203 2478 ntTSL 2 BASIC20.7■□□□□ 0.9
NEK1Q96PY6 SLC12A9-202ENST00000415287 1912 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
NEK1Q96PY6 AC116353.5-201ENST00000638148 1699 ntBASIC20.7■□□□□ 0.9
NEK1Q96PY6 CLDN6-202ENST00000396925 1739 ntAPPRIS P1 TSL 5 BASIC20.7■□□□□ 0.9
NEK1Q96PY6 FN1-208ENST00000426059 2388 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
NEK1Q96PY6 BFSP1-201ENST00000377868 2063 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
NEK1Q96PY6 EVI5L-202ENST00000538904 2418 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
NEK1Q96PY6 CHGA-202ENST00000334654 1474 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
NEK1Q96PY6 TNFSF14-202ENST00000599359 1476 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
NEK1Q96PY6 DMRTA2-201ENST00000404795 3137 ntAPPRIS P1 TSL 5 BASIC20.69■□□□□ 0.9
NEK1Q96PY6 CAMK2G-205ENST00000372765 1822 ntTSL 5 BASIC20.69■□□□□ 0.9
NEK1Q96PY6 C11orf80-203ENST00000525449 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC20.69■□□□□ 0.9
NEK1Q96PY6 IQGAP2-201ENST00000274364 5844 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
NEK1Q96PY6 TMUB2-213ENST00000589856 1505 ntTSL 2 BASIC20.69■□□□□ 0.9
NEK1Q96PY6 NAGPA-201ENST00000312251 2202 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
NEK1Q96PY6 TSPAN7-202ENST00000378482 1909 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
NEK1Q96PY6 SQSTM1-202ENST00000389805 2986 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
NEK1Q96PY6 GRB10-208ENST00000403097 5432 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
NEK1Q96PY6 CERCAM-201ENST00000372838 2685 ntAPPRIS P3 TSL 1 (best) BASIC20.69■□□□□ 0.9
NEK1Q96PY6 E2F2-201ENST00000361729 5191 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
NEK1Q96PY6 EPHX2-204ENST00000518379 1959 ntAPPRIS ALT2 TSL 5 BASIC20.69■□□□□ 0.9
NEK1Q96PY6 AC125494.1-203ENST00000396799 1622 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
NEK1Q96PY6 COL9A1-201ENST00000320755 3059 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
NEK1Q96PY6 PRMT2-201ENST00000291705 1011 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
NEK1Q96PY6 GGT1-204ENST00000401885 968 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
NEK1Q96PY6 AKR7L-201ENST00000420396 1240 ntAPPRIS ALT2 TSL 5 BASIC20.69■□□□□ 0.9
NEK1Q96PY6 ICAM2-203ENST00000449662 1221 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
NEK1Q96PY6 LINC01293-201ENST00000453951 1266 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
NEK1Q96PY6 COX18-204ENST00000507544 1086 ntAPPRIS ALT1 TSL 1 (best) BASIC20.69■□□□□ 0.9
NEK1Q96PY6 AL157871.1-202ENST00000556458 478 ntTSL 5 BASIC20.69■□□□□ 0.9
NEK1Q96PY6 AL133352.1-203ENST00000557395 1234 ntAPPRIS P5 TSL 2 BASIC20.69■□□□□ 0.9
NEK1Q96PY6 MIR5100-201ENST00000579544 119 ntBASIC20.69■□□□□ 0.9
NEK1Q96PY6 AC087289.1-201ENST00000586808 890 ntTSL 5 BASIC20.69■□□□□ 0.9
NEK1Q96PY6 ZNF280D-205ENST00000559000 4726 ntAPPRIS ALT2 TSL 2 BASIC20.69■□□□□ 0.9
NEK1Q96PY6 DNASE1L2-201ENST00000320700 1326 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
NEK1Q96PY6 CLDN15-202ENST00000401528 2131 ntAPPRIS P1 TSL 2 BASIC20.69■□□□□ 0.9
NEK1Q96PY6 LRFN3-201ENST00000246529 2513 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
NEK1Q96PY6 TBX2-201ENST00000240328 3339 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
NEK1Q96PY6 BBS7-204ENST00000506636 2570 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
NEK1Q96PY6 RNPS1-202ENST00000320225 2241 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
NEK1Q96PY6 ARHGEF5-202ENST00000471847 1862 ntAPPRIS ALT2 TSL 1 (best) BASIC20.69■□□□□ 0.9
NEK1Q96PY6 PCDHGC3-205ENST00000617641 2346 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
NEK1Q96PY6 CRKL-201ENST00000354336 5325 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
NEK1Q96PY6 DMKN-201ENST00000339686 1927 ntAPPRIS P3 TSL 1 (best) BASIC20.68■□□□□ 0.9
NEK1Q96PY6 HES1-201ENST00000232424 1578 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
NEK1Q96PY6 MTG1-201ENST00000317502 1560 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
NEK1Q96PY6 NOMO2-202ENST00000381474 3911 ntAPPRIS ALT2 TSL 5 BASIC20.68■□□□□ 0.9
NEK1Q96PY6 SYNE3-202ENST00000553340 2615 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
NEK1Q96PY6 TRIM17-201ENST00000295033 1730 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
NEK1Q96PY6 LMBR1L-204ENST00000547382 2235 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
NEK1Q96PY6 ISLR2-203ENST00000435464 4259 ntAPPRIS P1 TSL 2 BASIC20.68■□□□□ 0.9
NEK1Q96PY6 ESYT2-206ENST00000613624 2766 ntAPPRIS ALT2 TSL 2 BASIC20.68■□□□□ 0.9
NEK1Q96PY6 TTC29-201ENST00000325106 1785 ntAPPRIS P3 TSL 1 (best) BASIC20.68■□□□□ 0.9
NEK1Q96PY6 ENSA-206ENST00000361631 725 ntTSL 2 BASIC20.68■□□□□ 0.9
NEK1Q96PY6 FUOM-202ENST00000368551 628 ntTSL 3 BASIC20.68■□□□□ 0.9
NEK1Q96PY6 HCCS-202ENST00000380762 1072 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
NEK1Q96PY6 AC068134.1-202ENST00000439072 356 ntTSL 5 BASIC20.68■□□□□ 0.9
NEK1Q96PY6 AP000344.1-201ENST00000454268 641 ntTSL 5 BASIC20.68■□□□□ 0.9
NEK1Q96PY6 AP000344.1-202ENST00000457193 586 ntTSL 4 BASIC20.68■□□□□ 0.9
NEK1Q96PY6 TOLLIP-AS1-201ENST00000530897 939 ntBASIC20.68■□□□□ 0.9
NEK1Q96PY6 KRT126P-201ENST00000549467 1181 ntBASIC20.68■□□□□ 0.9
NEK1Q96PY6 ZFPM1-205ENST00000569086 563 ntTSL 2 BASIC20.68■□□□□ 0.9
NEK1Q96PY6 SRSF1-209ENST00000585096 568 ntTSL 4 BASIC20.68■□□□□ 0.9
NEK1Q96PY6 AXIN2-208ENST00000611991 1019 ntTSL 5 BASIC20.68■□□□□ 0.9
NEK1Q96PY6 IGSF8-201ENST00000314485 2343 ntAPPRIS P2 TSL 1 (best) BASIC20.68■□□□□ 0.9
NEK1Q96PY6 C8orf46-215ENST00000522977 1347 ntTSL 2 BASIC20.68■□□□□ 0.9
NEK1Q96PY6 ARHGEF28-203ENST00000426542 6118 ntAPPRIS ALT2 TSL 1 (best) BASIC20.68■□□□□ 0.9
NEK1Q96PY6 DIABLO-204ENST00000413918 1859 ntTSL 2 BASIC20.68■□□□□ 0.9
NEK1Q96PY6 CHRNA7-207ENST00000635884 1975 ntTSL 5 BASIC20.68■□□□□ 0.9
NEK1Q96PY6 DNAJC28-203ENST00000402202 1480 ntAPPRIS P1 TSL 5 BASIC20.68■□□□□ 0.9
NEK1Q96PY6 CASKIN2-201ENST00000321617 5015 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
NEK1Q96PY6 C11orf68-203ENST00000530188 1528 ntAPPRIS ALT2 BASIC20.68■□□□□ 0.9
NEK1Q96PY6 PLCH2-203ENST00000378486 4837 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
NEK1Q96PY6 PLCH2-204ENST00000419816 4837 ntAPPRIS P1 TSL 5 BASIC20.67■□□□□ 0.9
NEK1Q96PY6 DDX1-207ENST00000617198 2257 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
NEK1Q96PY6 SLC39A1-211ENST00000621013 2322 ntAPPRIS P1 TSL 2 BASIC20.67■□□□□ 0.9
NEK1Q96PY6 OLA1-201ENST00000284719 4417 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
NEK1Q96PY6 ZNF264-202ENST00000536056 2078 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
NEK1Q96PY6 PLEKHG6-203ENST00000396988 2963 ntAPPRIS P1 TSL 2 BASIC20.67■□□□□ 0.9
NEK1Q96PY6 GNB1L-203ENST00000405009 1076 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
NEK1Q96PY6 TMEM213-202ENST00000413208 480 ntAPPRIS ALT2 TSL 3 BASIC20.67■□□□□ 0.9
NEK1Q96PY6 NUS1P2-201ENST00000417358 873 ntBASIC20.67■□□□□ 0.9
NEK1Q96PY6 THAP5-204ENST00000438865 868 ntTSL 2 BASIC20.67■□□□□ 0.9
NEK1Q96PY6 NKTR-203ENST00000442970 646 ntTSL 2 BASIC20.67■□□□□ 0.9
NEK1Q96PY6 STK19B-204ENST00000512515 211 ntBASIC20.67■□□□□ 0.9
NEK1Q96PY6 FICD-205ENST00000552758 603 ntTSL 2 BASIC20.67■□□□□ 0.9
NEK1Q96PY6 COX5A-204ENST00000567270 579 ntTSL 3 BASIC20.67■□□□□ 0.9
NEK1Q96PY6 AC005632.4-201ENST00000613759 431 ntTSL 3 BASIC20.67■□□□□ 0.9
NEK1Q96PY6 AC073592.5-201ENST00000624854 528 ntBASIC20.67■□□□□ 0.9
Retrieved 100 of 98,524 protein–RNA pairs in 43.1 ms