Protein–RNA interactions for Protein: Q96PG1

MS4A4E, Putative membrane-spanning 4-domains subfamily A member 4E, humanhuman

Predictions only

Length 132 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MS4A4EQ96PG1 GAREM2-202ENST00000407684 5138 ntTSL 2 BASIC16.34■□□□□ 0.21
MS4A4EQ96PG1 RASA2-202ENST00000452898 2562 ntAPPRIS ALT2 TSL 5 BASIC16.34■□□□□ 0.21
MS4A4EQ96PG1 CLDN14-203ENST00000399136 1330 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
MS4A4EQ96PG1 FO681492.1-201ENST00000623662 5321 ntAPPRIS P5 TSL 2 BASIC16.34■□□□□ 0.21
MS4A4EQ96PG1 C8orf33-201ENST00000331434 2677 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
MS4A4EQ96PG1 NEIL2-202ENST00000403422 2016 ntTSL 2 BASIC16.34■□□□□ 0.21
MS4A4EQ96PG1 PHF12-205ENST00000577226 7679 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
MS4A4EQ96PG1 RPL13P5-202ENST00000412023 1438 ntTSL 2 BASIC16.34■□□□□ 0.21
MS4A4EQ96PG1 HPGD-213ENST00000541923 2920 ntTSL 2 BASIC16.34■□□□□ 0.21
MS4A4EQ96PG1 TP73-AS1-210ENST00000637775 1455 ntBASIC16.34■□□□□ 0.21
MS4A4EQ96PG1 NSUN5P1-202ENST00000421140 1535 ntBASIC16.34■□□□□ 0.21
MS4A4EQ96PG1 NSUN5P2-203ENST00000457352 1529 ntBASIC16.34■□□□□ 0.21
MS4A4EQ96PG1 AL049757.1-201ENST00000616842 1596 ntBASIC16.34■□□□□ 0.21
MS4A4EQ96PG1 RCC1-202ENST00000373832 2424 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
MS4A4EQ96PG1 SNX17-210ENST00000537606 2400 ntTSL 2 BASIC16.34■□□□□ 0.21
MS4A4EQ96PG1 LAT-203ENST00000395456 1616 ntAPPRIS ALT2 TSL 1 (best) BASIC16.34■□□□□ 0.21
MS4A4EQ96PG1 EMB-204ENST00000508934 1617 ntAPPRIS ALT2 TSL 5 BASIC16.34■□□□□ 0.21
MS4A4EQ96PG1 HNRNPM-217ENST00000620401 2458 ntAPPRIS ALT2 TSL 1 (best) BASIC16.34■□□□□ 0.21
MS4A4EQ96PG1 FGFR4-207ENST00000502906 2638 ntAPPRIS P4 TSL 1 (best) BASIC16.33■□□□□ 0.21
MS4A4EQ96PG1 RUVBL1-201ENST00000322623 1761 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
MS4A4EQ96PG1 CXorf58-201ENST00000379211 1752 ntAPPRIS P2 TSL 1 (best) BASIC16.33■□□□□ 0.21
MS4A4EQ96PG1 ZNF710-201ENST00000268154 4617 ntAPPRIS P1 TSL 2 BASIC16.33■□□□□ 0.21
MS4A4EQ96PG1 TUBB2B-201ENST00000259818 2020 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
MS4A4EQ96PG1 TLE2-217ENST00000590536 2344 ntAPPRIS ALT2 TSL 1 (best) BASIC16.33■□□□□ 0.2
MS4A4EQ96PG1 KCNJ2-AS1-201ENST00000590966 2442 ntBASIC16.33■□□□□ 0.2
MS4A4EQ96PG1 PXMP4-201ENST00000217398 979 ntTSL 2 BASIC16.33■□□□□ 0.2
MS4A4EQ96PG1 RPA2-202ENST00000373909 1162 ntTSL 3 BASIC16.33■□□□□ 0.2
MS4A4EQ96PG1 PFDN6-201ENST00000374606 740 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
MS4A4EQ96PG1 CBR1-203ENST00000439427 1024 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
MS4A4EQ96PG1 RPP14-206ENST00000466547 805 ntAPPRIS P1 TSL 3 BASIC16.33■□□□□ 0.2
MS4A4EQ96PG1 TPM1-226ENST00000560959 925 ntTSL 2 BASIC16.33■□□□□ 0.2
MS4A4EQ96PG1 TMIGD2-202ENST00000595645 1212 ntAPPRIS ALT2 TSL 1 (best) BASIC16.33■□□□□ 0.2
MS4A4EQ96PG1 TMEFF2-201ENST00000272771 2604 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
MS4A4EQ96PG1 NSD3-201ENST00000316985 3995 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
MS4A4EQ96PG1 SIRT1-201ENST00000212015 4094 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
MS4A4EQ96PG1 ABHD11-205ENST00000437775 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC16.33■□□□□ 0.2
MS4A4EQ96PG1 TMEM106C-203ENST00000449758 1414 ntTSL 2 BASIC16.33■□□□□ 0.2
MS4A4EQ96PG1 AC126755.2-202ENST00000427999 1547 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
MS4A4EQ96PG1 KMT5B-205ENST00000402789 1599 ntTSL 5 BASIC16.33■□□□□ 0.2
MS4A4EQ96PG1 BCAR1-201ENST00000162330 3221 ntAPPRIS P3 TSL 1 (best) BASIC16.33■□□□□ 0.2
MS4A4EQ96PG1 SEPT2-245ENST00000616972 3446 ntTSL 2 BASIC16.33■□□□□ 0.2
MS4A4EQ96PG1 ANHX-201ENST00000419717 1765 ntAPPRIS P1 TSL 2 BASIC16.33■□□□□ 0.2
MS4A4EQ96PG1 TVP23C-204ENST00000438826 1852 ntAPPRIS ALT1 TSL 1 (best) BASIC16.33■□□□□ 0.2
MS4A4EQ96PG1 WDR13-201ENST00000218056 2124 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
MS4A4EQ96PG1 DENND6B-201ENST00000413817 4939 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
MS4A4EQ96PG1 MYO1B-204ENST00000392318 5082 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
MS4A4EQ96PG1 NXPH2-201ENST00000272641 1052 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
MS4A4EQ96PG1 INO80E-201ENST00000304516 1489 ntTSL 2 BASIC16.32■□□□□ 0.2
MS4A4EQ96PG1 KCNE3-201ENST00000310128 3143 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
MS4A4EQ96PG1 DMKN-201ENST00000339686 1927 ntAPPRIS P3 TSL 1 (best) BASIC16.32■□□□□ 0.2
MS4A4EQ96PG1 ARMC12-202ENST00000373866 1254 ntAPPRIS P1 TSL 3 BASIC16.32■□□□□ 0.2
MS4A4EQ96PG1 MPIG6B-205ENST00000375810 910 ntAPPRIS ALT2 TSL 1 (best) BASIC16.32■□□□□ 0.2
MS4A4EQ96PG1 CORT-201ENST00000377049 1130 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
MS4A4EQ96PG1 BRPF1-201ENST00000383829 4736 ntAPPRIS ALT1 TSL 1 (best) BASIC16.32■□□□□ 0.2
MS4A4EQ96PG1 CTNS-203ENST00000399306 803 ntTSL 3 BASIC16.32■□□□□ 0.2
MS4A4EQ96PG1 GCGR-201ENST00000400723 2051 ntAPPRIS P2 TSL 1 (best) BASIC16.32■□□□□ 0.2
MS4A4EQ96PG1 TRNT1-205ENST00000402675 1935 ntTSL 2 BASIC16.32■□□□□ 0.2
MS4A4EQ96PG1 ATP5G2P1-201ENST00000433580 426 ntBASIC16.32■□□□□ 0.2
MS4A4EQ96PG1 AP000347.1-209ENST00000437294 557 ntTSL 4 BASIC16.32■□□□□ 0.2
MS4A4EQ96PG1 ZNF655-215ENST00000440391 1198 ntTSL 2 BASIC16.32■□□□□ 0.2
MS4A4EQ96PG1 NKIRAS2-207ENST00000449471 1461 ntTSL 2 BASIC16.32■□□□□ 0.2
MS4A4EQ96PG1 AL109797.1-201ENST00000452501 835 ntTSL 2 BASIC16.32■□□□□ 0.2
MS4A4EQ96PG1 COX18-204ENST00000507544 1086 ntAPPRIS ALT1 TSL 1 (best) BASIC16.32■□□□□ 0.2
MS4A4EQ96PG1 PWP1-202ENST00000541166 1722 ntTSL 2 BASIC16.32■□□□□ 0.2
MS4A4EQ96PG1 BARHL1-202ENST00000542090 1197 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
MS4A4EQ96PG1 AC015712.1-203ENST00000559331 593 ntTSL 3 BASIC16.32■□□□□ 0.2
MS4A4EQ96PG1 AC074051.2-201ENST00000565115 352 ntBASIC16.32■□□□□ 0.2
MS4A4EQ96PG1 HOXB8-203ENST00000576562 743 ntAPPRIS ALT1 TSL 2 BASIC16.32■□□□□ 0.2
MS4A4EQ96PG1 MIR3180-1-201ENST00000580374 94 ntBASIC16.32■□□□□ 0.2
MS4A4EQ96PG1 MIR3180-3-201ENST00000584616 94 ntBASIC16.32■□□□□ 0.2
MS4A4EQ96PG1 ZNF397-204ENST00000585800 2046 ntTSL 5 BASIC16.32■□□□□ 0.2
MS4A4EQ96PG1 ANKRD29-202ENST00000585908 846 ntTSL 2 BASIC16.32■□□□□ 0.2
MS4A4EQ96PG1 YIPF2-204ENST00000586748 1550 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
MS4A4EQ96PG1 CXXC1-212ENST00000589940 2242 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
MS4A4EQ96PG1 AC008687.7-201ENST00000593309 920 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
MS4A4EQ96PG1 BNIP3P18-201ENST00000593976 575 ntBASIC16.32■□□□□ 0.2
MS4A4EQ96PG1 AL353593.2-201ENST00000602529 1483 ntBASIC16.32■□□□□ 0.2
MS4A4EQ96PG1 AC243773.1-201ENST00000614759 544 ntTSL 5 BASIC16.32■□□□□ 0.2
MS4A4EQ96PG1 GOLGA2P10-204ENST00000618004 1349 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
MS4A4EQ96PG1 BEAN1-211ENST00000622872 1171 ntAPPRIS P2 TSL 5 BASIC16.32■□□□□ 0.2
MS4A4EQ96PG1 AC046185.3-201ENST00000623228 1824 ntBASIC16.32■□□□□ 0.2
MS4A4EQ96PG1 PROSER1-201ENST00000352251 5168 ntAPPRIS P2 TSL 1 (best) BASIC16.32■□□□□ 0.2
MS4A4EQ96PG1 GIT1-203ENST00000394869 3711 ntAPPRIS ALT2 TSL 1 (best) BASIC16.32■□□□□ 0.2
MS4A4EQ96PG1 KCNA2-201ENST00000316361 2827 ntAPPRIS P1 TSL 2 BASIC16.32■□□□□ 0.2
MS4A4EQ96PG1 LINC00921-202ENST00000573951 2468 ntTSL 2 BASIC16.31■□□□□ 0.2
MS4A4EQ96PG1 DDX28-201ENST00000332395 2169 ntAPPRIS P1 BASIC16.31■□□□□ 0.2
MS4A4EQ96PG1 TEAD2-204ENST00000593945 2141 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
MS4A4EQ96PG1 GPBAR1-204ENST00000522678 2003 ntAPPRIS P1 TSL 2 BASIC16.31■□□□□ 0.2
MS4A4EQ96PG1 FTSJ1-201ENST00000019019 1986 ntAPPRIS ALT1 TSL 2 BASIC16.31■□□□□ 0.2
MS4A4EQ96PG1 OGG1-206ENST00000349503 1950 ntTSL 5 BASIC16.31■□□□□ 0.2
MS4A4EQ96PG1 SP3-203ENST00000418194 3937 ntAPPRIS ALT2 TSL 1 (best) BASIC16.31■□□□□ 0.2
MS4A4EQ96PG1 POC1A-203ENST00000474012 1760 ntAPPRIS ALT2 TSL 2 BASIC16.31■□□□□ 0.2
MS4A4EQ96PG1 COQ9-201ENST00000262507 1677 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
MS4A4EQ96PG1 NODAL-201ENST00000287139 1665 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
MS4A4EQ96PG1 STX2-201ENST00000261653 3331 ntAPPRIS ALT1 TSL 1 (best) BASIC16.31■□□□□ 0.2
MS4A4EQ96PG1 FUT8-AS1-201ENST00000621019 1521 ntBASIC16.31■□□□□ 0.2
MS4A4EQ96PG1 ST8SIA5-202ENST00000536490 1499 ntTSL 2 BASIC16.31■□□□□ 0.2
MS4A4EQ96PG1 KRT8P10-201ENST00000450021 1447 ntBASIC16.31■□□□□ 0.2
MS4A4EQ96PG1 CFC1B-203ENST00000620207 1444 ntTSL 5 BASIC16.31■□□□□ 0.2
MS4A4EQ96PG1 CFC1-203ENST00000621673 1444 ntTSL 2 BASIC16.31■□□□□ 0.2
Retrieved 100 of 98,524 protein–RNA pairs in 61.4 ms