Protein–RNA interactions for Protein: Q96PB1

CASD1, N-acetylneuraminate 9-O-acetyltransferase, humanhuman

Predictions only

Length 797 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CASD1Q96PB1 AC087289.5-201ENST00000586076 3175 ntBASIC18.54■□□□□ 0.56
CASD1Q96PB1 TUBB2B-201ENST00000259818 2020 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
CASD1Q96PB1 RTL8B-201ENST00000391440 2026 ntAPPRIS P1 BASIC18.54■□□□□ 0.56
CASD1Q96PB1 PAAF1-205ENST00000535604 1695 ntTSL 5 BASIC18.54■□□□□ 0.56
CASD1Q96PB1 WSCD1-209ENST00000574232 2129 ntAPPRIS P1 TSL 5 BASIC18.53■□□□□ 0.56
CASD1Q96PB1 KRT6C-201ENST00000252250 2289 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
CASD1Q96PB1 KRT6B-201ENST00000252252 2282 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
CASD1Q96PB1 PRKAR1B-204ENST00000406797 2553 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
CASD1Q96PB1 DLK1-202ENST00000341267 4722 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
CASD1Q96PB1 DSCR9-201ENST00000454482 1644 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
CASD1Q96PB1 RIMBP3B-201ENST00000620804 6105 ntAPPRIS P1 BASIC18.53■□□□□ 0.56
CASD1Q96PB1 CTRB2-201ENST00000303037 901 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
CASD1Q96PB1 GRHPR-201ENST00000318158 1280 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
CASD1Q96PB1 EFNA4-202ENST00000368409 1263 ntAPPRIS P3 TSL 1 (best) BASIC18.53■□□□□ 0.56
CASD1Q96PB1 TP53BP2-202ENST00000391878 4741 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
CASD1Q96PB1 PNMT-202ENST00000394246 821 ntTSL 2 BASIC18.53■□□□□ 0.56
CASD1Q96PB1 ABHD11-203ENST00000395147 812 ntTSL 3 BASIC18.53■□□□□ 0.56
CASD1Q96PB1 ZDHHC4-205ENST00000396713 1552 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
CASD1Q96PB1 SEC24B-AS1-201ENST00000499359 957 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
CASD1Q96PB1 SEC24B-AS1-204ENST00000510971 554 ntTSL 4 BASIC18.53■□□□□ 0.56
CASD1Q96PB1 MRPL52-208ENST00000553711 586 ntTSL 3 BASIC18.53■□□□□ 0.56
CASD1Q96PB1 RNF34-208ENST00000555076 593 ntTSL 3 BASIC18.53■□□□□ 0.56
CASD1Q96PB1 AC010503.2-201ENST00000599292 296 ntTSL 3 BASIC18.53■□□□□ 0.56
CASD1Q96PB1 AC106028.4-201ENST00000614509 607 ntBASIC18.53■□□□□ 0.56
CASD1Q96PB1 AC093028.1-201ENST00000622998 982 ntBASIC18.53■□□□□ 0.56
CASD1Q96PB1 FAM238C-204ENST00000640224 1268 ntTSL 5 BASIC18.53■□□□□ 0.56
CASD1Q96PB1 SLC22A23-205ENST00000436008 6641 ntAPPRIS ALT2 TSL 5 BASIC18.53■□□□□ 0.56
CASD1Q96PB1 PROB1-201ENST00000434752 5122 ntAPPRIS P1 BASIC18.53■□□□□ 0.56
CASD1Q96PB1 HOTTIP-202ENST00000472494 2285 ntTSL 2 BASIC18.53■□□□□ 0.56
CASD1Q96PB1 PLK5-201ENST00000334770 2106 ntAPPRIS P2 TSL 2 BASIC18.53■□□□□ 0.56
CASD1Q96PB1 IDUA-210ENST00000514224 2130 ntTSL 2 BASIC18.53■□□□□ 0.56
CASD1Q96PB1 SUSD4-208ENST00000494793 1833 ntTSL 5 BASIC18.53■□□□□ 0.56
CASD1Q96PB1 UVSSA-209ENST00000512728 1668 ntAPPRIS ALT2 TSL 1 (best) BASIC18.53■□□□□ 0.56
CASD1Q96PB1 DPAGT1-203ENST00000409993 3274 ntAPPRIS P1 TSL 2 BASIC18.53■□□□□ 0.56
CASD1Q96PB1 SHISA7-201ENST00000376325 6033 ntAPPRIS P2 TSL 2 BASIC18.53■□□□□ 0.56
CASD1Q96PB1 RXRB-202ENST00000374685 2846 ntAPPRIS ALT1 TSL 1 (best) BASIC18.53■□□□□ 0.56
CASD1Q96PB1 CLDN6-201ENST00000328796 1369 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
CASD1Q96PB1 VGLL4-211ENST00000430365 1377 ntAPPRIS P1 TSL 2 BASIC18.53■□□□□ 0.56
CASD1Q96PB1 PIF1-205ENST00000559239 2677 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
CASD1Q96PB1 HBEGF-201ENST00000230990 2386 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
CASD1Q96PB1 POC1B-GALNT4-201ENST00000547474 2207 ntTSL 2 BASIC18.53■□□□□ 0.56
CASD1Q96PB1 KRT79-201ENST00000330553 2068 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
CASD1Q96PB1 BPGM-202ENST00000393132 2051 ntAPPRIS P1 TSL 5 BASIC18.53■□□□□ 0.56
CASD1Q96PB1 AL121761.2-201ENST00000598007 1648 ntBASIC18.52■□□□□ 0.56
CASD1Q96PB1 NDOR1-203ENST00000427047 2315 ntTSL 2 BASIC18.52■□□□□ 0.56
CASD1Q96PB1 SRCIN1-213ENST00000617146 7058 ntAPPRIS P2 TSL 1 (best) BASIC18.52■□□□□ 0.56
CASD1Q96PB1 NLE1-201ENST00000360831 1726 ntTSL 5 BASIC18.52■□□□□ 0.56
CASD1Q96PB1 PDE6B-202ENST00000429163 2120 ntTSL 2 BASIC18.52■□□□□ 0.56
CASD1Q96PB1 SDCBP-204ENST00000447182 2103 ntAPPRIS ALT1 TSL 1 (best) BASIC18.52■□□□□ 0.56
CASD1Q96PB1 DYNC1LI2-201ENST00000258198 4515 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
CASD1Q96PB1 RWDD3-201ENST00000263893 1078 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
CASD1Q96PB1 PRUNE2-202ENST00000376713 1069 ntTSL 5 BASIC18.52■□□□□ 0.56
CASD1Q96PB1 FALEC-201ENST00000416894 566 ntTSL 3 BASIC18.52■□□□□ 0.56
CASD1Q96PB1 PXN-AS1-201ENST00000535200 1170 ntTSL 2 BASIC18.52■□□□□ 0.56
CASD1Q96PB1 AL109827.1-203ENST00000541176 872 ntAPPRIS P5 TSL 2 BASIC18.52■□□□□ 0.56
CASD1Q96PB1 AC027243.1-201ENST00000559539 758 ntTSL 3 BASIC18.52■□□□□ 0.56
CASD1Q96PB1 AC004835.2-201ENST00000603762 682 ntBASIC18.52■□□□□ 0.56
CASD1Q96PB1 CBY1-211ENST00000619293 1118 ntTSL 5 BASIC18.52■□□□□ 0.56
CASD1Q96PB1 UBE3D-208ENST00000626828 114 ntTSL 5 BASIC18.52■□□□□ 0.56
CASD1Q96PB1 CDK1-204ENST00000448257 1948 ntAPPRIS ALT1 TSL 1 (best) BASIC18.52■□□□□ 0.56
CASD1Q96PB1 ESR2-201ENST00000267525 1518 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
CASD1Q96PB1 GOLGA6L17P-202ENST00000614358 1398 ntBASIC18.52■□□□□ 0.55
CASD1Q96PB1 SLC47A2-201ENST00000325411 2258 ntAPPRIS P3 TSL 1 (best) BASIC18.52■□□□□ 0.55
CASD1Q96PB1 KIF22-201ENST00000160827 2113 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.55
CASD1Q96PB1 NOX4-201ENST00000263317 2388 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.55
CASD1Q96PB1 EDN3-204ENST00000371028 2397 ntAPPRIS P4 TSL 5 BASIC18.52■□□□□ 0.55
CASD1Q96PB1 WDR74-204ENST00000525239 1736 ntAPPRIS P1 TSL 2 BASIC18.52■□□□□ 0.55
CASD1Q96PB1 ZNF133-211ENST00000538547 2245 ntTSL 2 BASIC18.51■□□□□ 0.55
CASD1Q96PB1 AC129492.6-201ENST00000611383 1305 ntBASIC18.51■□□□□ 0.55
CASD1Q96PB1 GPS1-201ENST00000306823 1842 ntAPPRIS P3 TSL 1 (best) BASIC18.51■□□□□ 0.55
CASD1Q96PB1 SLC35E1-208ENST00000595753 5099 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
CASD1Q96PB1 MARK2-208ENST00000508192 2924 ntAPPRIS P3 TSL 5 BASIC18.51■□□□□ 0.55
CASD1Q96PB1 C9orf64-203ENST00000376344 2443 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
CASD1Q96PB1 RNFT2-202ENST00000319176 2180 ntTSL 5 BASIC18.51■□□□□ 0.55
CASD1Q96PB1 ABALON-201ENST00000629058 1903 ntBASIC18.51■□□□□ 0.55
CASD1Q96PB1 EVA1C-202ENST00000382699 1668 ntAPPRIS ALT1 TSL 1 (best) BASIC18.51■□□□□ 0.55
CASD1Q96PB1 AC009779.2-201ENST00000552576 1443 ntTSL 4 BASIC18.51■□□□□ 0.55
CASD1Q96PB1 SCYL2-201ENST00000360820 5779 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
CASD1Q96PB1 NRSN2-AS1-202ENST00000442637 762 ntTSL 3 BASIC18.51■□□□□ 0.55
CASD1Q96PB1 LINC01640-201ENST00000452505 550 ntTSL 4 BASIC18.51■□□□□ 0.55
CASD1Q96PB1 OR10S1-201ENST00000531945 1121 ntAPPRIS P2 BASIC18.51■□□□□ 0.55
CASD1Q96PB1 RPL28-209ENST00000560055 670 ntTSL 3 BASIC18.51■□□□□ 0.55
CASD1Q96PB1 AC022145.2-201ENST00000598203 171 ntBASIC18.51■□□□□ 0.55
CASD1Q96PB1 TBX18-206ENST00000606784 1230 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
CASD1Q96PB1 OR10S1-202ENST00000641123 1121 ntAPPRIS ALT2 BASIC18.51■□□□□ 0.55
CASD1Q96PB1 AGAP1-205ENST00000409538 6138 ntTSL 5 BASIC18.51■□□□□ 0.55
CASD1Q96PB1 TRPC1-203ENST00000476941 3061 ntAPPRIS ALT2 TSL 1 (best) BASIC18.51■□□□□ 0.55
CASD1Q96PB1 PTGER3-201ENST00000306666 2333 ntAPPRIS ALT2 TSL 1 (best) BASIC18.51■□□□□ 0.55
CASD1Q96PB1 MAG-203ENST00000537831 2341 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
CASD1Q96PB1 SEPT8-208ENST00000378721 1723 ntTSL 5 BASIC18.51■□□□□ 0.55
CASD1Q96PB1 IGSF11-209ENST00000491903 1487 ntTSL 2 BASIC18.51■□□□□ 0.55
CASD1Q96PB1 MYEOV-201ENST00000308946 2287 ntAPPRIS P3 TSL 1 (best) BASIC18.51■□□□□ 0.55
CASD1Q96PB1 LZTS3-201ENST00000329152 5257 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
CASD1Q96PB1 MST1R-214ENST00000613534 2025 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
CASD1Q96PB1 VAV1-201ENST00000304076 2825 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
CASD1Q96PB1 LRRC14-201ENST00000292524 5328 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
CASD1Q96PB1 CBWD1-201ENST00000314367 1771 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
CASD1Q96PB1 ZNF598-204ENST00000563630 3371 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
CASD1Q96PB1 PDE8A-202ENST00000339708 2663 ntAPPRIS ALT2 TSL 1 (best) BASIC18.5■□□□□ 0.55
CASD1Q96PB1 ULK3-220ENST00000569437 2611 ntAPPRIS ALT1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Retrieved 100 of 98,524 protein–RNA pairs in 56.4 ms