Protein–RNA interactions for Protein: Q96JS3

PGBD1, PiggyBac transposable element-derived protein 1, humanhuman

Predictions only

Length 809 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PGBD1Q96JS3 TMEM234-202ENST00000344461 721 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
PGBD1Q96JS3 EDN3-203ENST00000371025 1153 ntAPPRIS ALT2 TSL 1 (best) BASIC20.32■□□□□ 0.84
PGBD1Q96JS3 HDAC11-204ENST00000404040 967 ntTSL 3 BASIC20.32■□□□□ 0.84
PGBD1Q96JS3 AC139749.1-201ENST00000534584 1094 ntTSL 3 BASIC20.32■□□□□ 0.84
PGBD1Q96JS3 MYL6-203ENST00000536128 1221 ntTSL 2 BASIC20.32■□□□□ 0.84
PGBD1Q96JS3 AP000721.2-201ENST00000537170 650 ntTSL 4 BASIC20.32■□□□□ 0.84
PGBD1Q96JS3 AC013356.2-201ENST00000559730 729 ntTSL 3 BASIC20.32■□□□□ 0.84
PGBD1Q96JS3 AC005944.1-201ENST00000592758 564 ntTSL 3 BASIC20.32■□□□□ 0.84
PGBD1Q96JS3 DNASE1L2-206ENST00000613572 1260 ntAPPRIS P1 TSL 5 BASIC20.32■□□□□ 0.84
PGBD1Q96JS3 LINC01451-201ENST00000623792 534 ntBASIC20.32■□□□□ 0.84
PGBD1Q96JS3 TMEM25-225ENST00000533102 1410 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
PGBD1Q96JS3 AGPAT3-201ENST00000291572 5546 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
PGBD1Q96JS3 SSBP3-203ENST00000371319 1578 ntAPPRIS ALT1 TSL 2 BASIC20.32■□□□□ 0.84
PGBD1Q96JS3 SERPINB6-207ENST00000612421 1570 ntTSL 2 BASIC20.32■□□□□ 0.84
PGBD1Q96JS3 RNF128-201ENST00000255499 2817 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
PGBD1Q96JS3 AC016757.1-205ENST00000470346 1888 ntTSL 2 BASIC20.32■□□□□ 0.84
PGBD1Q96JS3 TBX6-203ENST00000553607 2162 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
PGBD1Q96JS3 MYH7B-201ENST00000262873 6293 ntAPPRIS P2 TSL 1 (best) BASIC20.32■□□□□ 0.84
PGBD1Q96JS3 MIOX-202ENST00000395732 1658 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
PGBD1Q96JS3 KANSL1-202ENST00000432791 5343 ntAPPRIS P3 TSL 1 (best) BASIC20.32■□□□□ 0.84
PGBD1Q96JS3 SLC7A2-205ENST00000522656 2274 ntAPPRIS ALT1 TSL 1 (best) BASIC20.32■□□□□ 0.84
PGBD1Q96JS3 C2CD3-213ENST00000539061 2722 ntTSL 2 BASIC20.32■□□□□ 0.84
PGBD1Q96JS3 AC124067.4-201ENST00000519691 2379 ntBASIC20.31■□□□□ 0.84
PGBD1Q96JS3 DMKN-201ENST00000339686 1927 ntAPPRIS P3 TSL 1 (best) BASIC20.31■□□□□ 0.84
PGBD1Q96JS3 GRK6-202ENST00000355958 1789 ntAPPRIS ALT1 TSL 1 (best) BASIC20.31■□□□□ 0.84
PGBD1Q96JS3 CCDC78-201ENST00000293889 1611 ntAPPRIS P2 TSL 1 (best) BASIC20.31■□□□□ 0.84
PGBD1Q96JS3 MED29-202ENST00000594368 1471 ntTSL 2 BASIC20.31■□□□□ 0.84
PGBD1Q96JS3 SNX16-201ENST00000345957 1853 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
PGBD1Q96JS3 ETV7-204ENST00000373738 1570 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
PGBD1Q96JS3 MSL1-202ENST00000398532 4707 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
PGBD1Q96JS3 ST6GALNAC6-202ENST00000373141 2424 ntAPPRIS ALT1 TSL 2 BASIC20.31■□□□□ 0.84
PGBD1Q96JS3 CABP4-202ENST00000438189 1426 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
PGBD1Q96JS3 CCDC134-201ENST00000255784 1270 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
PGBD1Q96JS3 AKR1C7P-201ENST00000305623 895 ntBASIC20.31■□□□□ 0.84
PGBD1Q96JS3 ID2-202ENST00000331129 623 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
PGBD1Q96JS3 SLX1A-202ENST00000345535 762 ntAPPRIS ALT2 TSL 1 (best) BASIC20.31■□□□□ 0.84
PGBD1Q96JS3 SLX1B-202ENST00000351581 762 ntAPPRIS ALT2 TSL 1 (best) BASIC20.31■□□□□ 0.84
PGBD1Q96JS3 MRPL43-208ENST00000370242 884 ntTSL 2 BASIC20.31■□□□□ 0.84
PGBD1Q96JS3 MEF2B-202ENST00000409447 1297 ntTSL 3 BASIC20.31■□□□□ 0.84
PGBD1Q96JS3 SEC61G-203ENST00000415949 732 ntAPPRIS P1 TSL 5 BASIC20.31■□□□□ 0.84
PGBD1Q96JS3 THAP5-204ENST00000438865 868 ntTSL 2 BASIC20.31■□□□□ 0.84
PGBD1Q96JS3 EMBP1-201ENST00000458200 901 ntBASIC20.31■□□□□ 0.84
PGBD1Q96JS3 AP003555.3-201ENST00000534086 432 ntTSL 4 BASIC20.31■□□□□ 0.84
PGBD1Q96JS3 SNHG15-203ENST00000578968 982 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
PGBD1Q96JS3 MIR5100-201ENST00000579544 119 ntBASIC20.31■□□□□ 0.84
PGBD1Q96JS3 ZNF772-206ENST00000600175 737 ntTSL 2 BASIC20.31■□□□□ 0.84
PGBD1Q96JS3 FAM174B-201ENST00000327355 2792 ntAPPRIS P2 TSL 1 (best) BASIC20.31■□□□□ 0.84
PGBD1Q96JS3 RHOT1-201ENST00000333942 3133 ntAPPRIS ALT1 TSL 1 (best) BASIC20.31■□□□□ 0.84
PGBD1Q96JS3 CDCP2-202ENST00000530059 1623 ntAPPRIS ALT2 TSL 5 BASIC20.31■□□□□ 0.84
PGBD1Q96JS3 FMR1-205ENST00000370475 4308 ntAPPRIS P3 TSL 1 (best) BASIC20.31■□□□□ 0.84
PGBD1Q96JS3 ARHGAP8-201ENST00000336963 1487 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
PGBD1Q96JS3 MTHFD1L-211ENST00000611279 3475 ntAPPRIS ALT1 TSL 5 BASIC20.3■□□□□ 0.84
PGBD1Q96JS3 IFT74-203ENST00000433700 2119 ntAPPRIS P1 TSL 5 BASIC20.3■□□□□ 0.84
PGBD1Q96JS3 MAN1A1-201ENST00000368468 5014 ntAPPRIS P1 TSL 2 BASIC20.3■□□□□ 0.84
PGBD1Q96JS3 ATP5J-201ENST00000284971 614 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
PGBD1Q96JS3 MIR202HG-201ENST00000300167 384 ntTSL 2 BASIC20.3■□□□□ 0.84
PGBD1Q96JS3 DFFB-203ENST00000341385 572 ntTSL 5 BASIC20.3■□□□□ 0.84
PGBD1Q96JS3 LSM5-204ENST00000409909 740 ntTSL 2 BASIC20.3■□□□□ 0.84
PGBD1Q96JS3 UBXN10-AS1-201ENST00000442226 510 ntTSL 2 BASIC20.3■□□□□ 0.84
PGBD1Q96JS3 REPIN1-217ENST00000518514 478 ntTSL 3 BASIC20.3■□□□□ 0.84
PGBD1Q96JS3 TMEM135-209ENST00000532959 1149 ntTSL 2 BASIC20.3■□□□□ 0.84
PGBD1Q96JS3 AC009533.2-201ENST00000543664 586 ntBASIC20.3■□□□□ 0.84
PGBD1Q96JS3 AL133352.1-203ENST00000557395 1234 ntAPPRIS P5 TSL 2 BASIC20.3■□□□□ 0.84
PGBD1Q96JS3 RN7SL510P-201ENST00000581311 263 ntBASIC20.3■□□□□ 0.84
PGBD1Q96JS3 C19orf25-210ENST00000591027 574 ntTSL 4 BASIC20.3■□□□□ 0.84
PGBD1Q96JS3 AL591684.3-201ENST00000605187 298 ntBASIC20.3■□□□□ 0.84
PGBD1Q96JS3 SSBP1-215ENST00000612337 884 ntAPPRIS P1 TSL 2 BASIC20.3■□□□□ 0.84
PGBD1Q96JS3 TBC1D3P5-201ENST00000579401 1545 ntBASIC20.3■□□□□ 0.84
PGBD1Q96JS3 FAM120AOS-201ENST00000375412 2771 ntAPPRIS P3 TSL 1 (best) BASIC20.3■□□□□ 0.84
PGBD1Q96JS3 EML3-201ENST00000278845 3017 ntAPPRIS ALT1 TSL 5 BASIC20.3■□□□□ 0.84
PGBD1Q96JS3 PLEKHG5-212ENST00000537245 4794 ntAPPRIS ALT2 TSL 2 BASIC20.3■□□□□ 0.84
PGBD1Q96JS3 ADAMTSL5-201ENST00000330475 2857 ntAPPRIS P1 TSL 2 BASIC20.3■□□□□ 0.84
PGBD1Q96JS3 SRPX-202ENST00000432886 1725 ntTSL 2 BASIC20.3■□□□□ 0.84
PGBD1Q96JS3 AC002310.2-202ENST00000492040 1488 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
PGBD1Q96JS3 RBFOX1-222ENST00000585867 1580 ntTSL 2 BASIC20.29■□□□□ 0.84
PGBD1Q96JS3 ITGB7-202ENST00000422257 2791 ntAPPRIS P1 TSL 5 BASIC20.29■□□□□ 0.84
PGBD1Q96JS3 INTS4P1-201ENST00000438455 1935 ntBASIC20.29■□□□□ 0.84
PGBD1Q96JS3 C12orf56-207ENST00000543942 3242 ntAPPRIS P1 TSL 5 BASIC20.29■□□□□ 0.84
PGBD1Q96JS3 NOMO3-201ENST00000263012 3911 ntAPPRIS ALT2 TSL 1 (best) BASIC20.29■□□□□ 0.84
PGBD1Q96JS3 NSUN5P2-205ENST00000602348 1776 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
PGBD1Q96JS3 AL731569.1-201ENST00000428940 3058 ntTSL 2 BASIC20.29■□□□□ 0.84
PGBD1Q96JS3 RALY-203ENST00000375114 6430 ntAPPRIS ALT2 TSL 1 (best) BASIC20.29■□□□□ 0.84
PGBD1Q96JS3 MEG3-205ENST00000412736 1615 ntTSL 2 BASIC20.29■□□□□ 0.84
PGBD1Q96JS3 NDUFS7-201ENST00000233627 1039 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
PGBD1Q96JS3 CCS-201ENST00000310190 942 ntTSL 5 BASIC20.29■□□□□ 0.84
PGBD1Q96JS3 MCFD2-203ENST00000409147 671 ntTSL 2 BASIC20.29■□□□□ 0.84
PGBD1Q96JS3 LINC02247-201ENST00000417135 743 ntTSL 3 BASIC20.29■□□□□ 0.84
PGBD1Q96JS3 POM121L3P-201ENST00000419331 1163 ntBASIC20.29■□□□□ 0.84
PGBD1Q96JS3 AC096633.1-201ENST00000422446 749 ntBASIC20.29■□□□□ 0.84
PGBD1Q96JS3 NCBP2-AS1-201ENST00000447775 562 ntTSL 5 BASIC20.29■□□□□ 0.84
PGBD1Q96JS3 ICAM2-203ENST00000449662 1221 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
PGBD1Q96JS3 AL611929.1-201ENST00000457340 449 ntTSL 3 BASIC20.29■□□□□ 0.84
PGBD1Q96JS3 PP7080-204ENST00000510714 601 ntTSL 3 BASIC20.29■□□□□ 0.84
PGBD1Q96JS3 AC111152.3-201ENST00000569699 673 ntBASIC20.29■□□□□ 0.84
PGBD1Q96JS3 AC008738.3-201ENST00000589932 659 ntTSL 2 BASIC20.29■□□□□ 0.84
PGBD1Q96JS3 AC008735.1-201ENST00000592252 802 ntTSL 5 BASIC20.29■□□□□ 0.84
PGBD1Q96JS3 AC011467.2-201ENST00000598425 242 ntBASIC20.29■□□□□ 0.84
PGBD1Q96JS3 AL732314.6-201ENST00000627721 484 ntTSL 4 BASIC20.29■□□□□ 0.84
PGBD1Q96JS3 ADAM22-202ENST00000398201 2784 ntAPPRIS ALT2 TSL 1 (best) BASIC20.29■□□□□ 0.84
PGBD1Q96JS3 ETNK2-202ENST00000367201 2431 ntAPPRIS ALT2 TSL 2 BASIC20.29■□□□□ 0.84
Retrieved 100 of 98,524 protein–RNA pairs in 26.7 ms