Protein–RNA interactions for Protein: Q96IW2

SHD, SH2 domain-containing adapter protein D, humanhuman

Predictions only

Length 340 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHDQ96IW2 AC106897.1-201ENST00000512874 394 ntTSL 2 BASIC17.56■□□□□ 0.4
SHDQ96IW2 FAM177A1-207ENST00000554052 540 ntAPPRIS ALT2 TSL 2 BASIC17.56■□□□□ 0.4
SHDQ96IW2 RBP1-207ENST00000619087 516 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
SHDQ96IW2 AL096828.2-201ENST00000567259 1965 ntBASIC17.56■□□□□ 0.4
SHDQ96IW2 MAPK8IP3-202ENST00000356010 4456 ntTSL 5 BASIC17.56■□□□□ 0.4
SHDQ96IW2 MTG1-201ENST00000317502 1560 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
SHDQ96IW2 ITPRIPL1-205ENST00000536814 1947 ntAPPRIS P1 TSL 3 BASIC17.56■□□□□ 0.4
SHDQ96IW2 RPRD1A-209ENST00000590898 1945 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
SHDQ96IW2 DXO-203ENST00000375356 1533 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
SHDQ96IW2 HLA-F-218ENST00000376861 1544 ntAPPRIS ALT2 BASIC17.56■□□□□ 0.4
SHDQ96IW2 WDR45-234ENST00000634838 1545 ntTSL 5 BASIC17.56■□□□□ 0.4
SHDQ96IW2 AC142086.1-202ENST00000398669 1839 ntTSL 2 BASIC17.56■□□□□ 0.4
SHDQ96IW2 HGNC:18790-211ENST00000621129 1483 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
SHDQ96IW2 DPYSL3-202ENST00000398514 5309 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
SHDQ96IW2 DOC2A-208ENST00000564944 1782 ntAPPRIS P1 TSL 5 BASIC17.56■□□□□ 0.4
SHDQ96IW2 MUS81-201ENST00000308110 2392 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
SHDQ96IW2 RAI2-203ENST00000415486 2037 ntTSL 2 BASIC17.55■□□□□ 0.4
SHDQ96IW2 TM2D3-207ENST00000559107 1353 ntTSL 3 BASIC17.55■□□□□ 0.4
SHDQ96IW2 AC100803.2-201ENST00000562459 1963 ntBASIC17.55■□□□□ 0.4
SHDQ96IW2 BRPF3-202ENST00000357641 6052 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
SHDQ96IW2 CLN6-202ENST00000538696 1343 ntTSL 2 BASIC17.55■□□□□ 0.4
SHDQ96IW2 SDCBP-201ENST00000260130 2167 ntAPPRIS P3 TSL 1 (best) BASIC17.55■□□□□ 0.4
SHDQ96IW2 CERCAM-213ENST00000612334 1554 ntAPPRIS ALT2 TSL 5 BASIC17.55■□□□□ 0.4
SHDQ96IW2 RNF151-201ENST00000321392 786 ntAPPRIS ALT2 TSL 1 (best) BASIC17.55■□□□□ 0.4
SHDQ96IW2 U52111.1-201ENST00000434284 914 ntTSL 3 BASIC17.55■□□□□ 0.4
SHDQ96IW2 ITGB1BP1-205ENST00000456913 1043 ntTSL 2 BASIC17.55■□□□□ 0.4
SHDQ96IW2 FAM72B-205ENST00000471903 676 ntTSL 5 BASIC17.55■□□□□ 0.4
SHDQ96IW2 ITGB1BP1-216ENST00000488451 874 ntTSL 3 BASIC17.55■□□□□ 0.4
SHDQ96IW2 VASH2-211ENST00000517399 1068 ntAPPRIS ALT1 TSL 1 (best) BASIC17.55■□□□□ 0.4
SHDQ96IW2 AHSA1-202ENST00000535854 1173 ntTSL 2 BASIC17.55■□□□□ 0.4
SHDQ96IW2 CERNA1-201ENST00000559779 908 ntTSL 3 BASIC17.55■□□□□ 0.4
SHDQ96IW2 RNF151-203ENST00000569714 796 ntAPPRIS P2 TSL 1 (best) BASIC17.55■□□□□ 0.4
SHDQ96IW2 YTHDF3-AS1-201ENST00000603538 718 ntBASIC17.55■□□□□ 0.4
SHDQ96IW2 SREK1-216ENST00000612404 2128 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
SHDQ96IW2 ZNF282-204ENST00000610704 3722 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
SHDQ96IW2 PCDHA4-201ENST00000378125 2328 ntTSL 5 BASIC17.55■□□□□ 0.4
SHDQ96IW2 WDR74-204ENST00000525239 1736 ntAPPRIS P1 TSL 2 BASIC17.55■□□□□ 0.4
SHDQ96IW2 NCCRP1-201ENST00000339852 1978 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
SHDQ96IW2 ACD-202ENST00000393919 1974 ntAPPRIS ALT2 TSL 1 (best) BASIC17.55■□□□□ 0.4
SHDQ96IW2 LACTB-202ENST00000413507 2978 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
SHDQ96IW2 HSD3B7-202ENST00000297679 2172 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
SHDQ96IW2 NDRG4-202ENST00000356752 1375 ntTSL 2 BASIC17.54■□□□□ 0.4
SHDQ96IW2 SCLT1-204ENST00000503215 1364 ntAPPRIS ALT2 TSL 1 (best) BASIC17.54■□□□□ 0.4
SHDQ96IW2 PSTPIP1-203ENST00000558012 1896 ntAPPRIS P2 TSL 1 (best) BASIC17.54■□□□□ 0.4
SHDQ96IW2 SNX11-201ENST00000359238 2315 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
SHDQ96IW2 IQCE-204ENST00000404984 2086 ntAPPRIS ALT2 TSL 5 BASIC17.54■□□□□ 0.4
SHDQ96IW2 WEE1-202ENST00000450114 2799 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
SHDQ96IW2 NSMF-201ENST00000265663 2981 ntAPPRIS P3 TSL 1 (best) BASIC17.54■□□□□ 0.4
SHDQ96IW2 NSMF-206ENST00000371475 2987 ntAPPRIS ALT1 TSL 1 (best) BASIC17.54■□□□□ 0.4
SHDQ96IW2 C14orf93-204ENST00000397377 1776 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
SHDQ96IW2 SKP2-201ENST00000274254 1537 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
SHDQ96IW2 NFATC4-220ENST00000555393 2235 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
SHDQ96IW2 ZDHHC3-205ENST00000424952 2687 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
SHDQ96IW2 SLC22A11-202ENST00000377581 1975 ntTSL 5 BASIC17.54■□□□□ 0.4
SHDQ96IW2 MIS18BP1-212ENST00000627697 1950 ntTSL 5 BASIC17.54■□□□□ 0.4
SHDQ96IW2 LST1-202ENST00000303757 604 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
SHDQ96IW2 YIF1B-201ENST00000329420 964 ntTSL 3 BASIC17.54■□□□□ 0.4
SHDQ96IW2 ENSA-206ENST00000361631 725 ntTSL 2 BASIC17.54■□□□□ 0.4
SHDQ96IW2 ABHD11-203ENST00000395147 812 ntTSL 3 BASIC17.54■□□□□ 0.4
SHDQ96IW2 AC016735.2-201ENST00000438736 569 ntTSL 4 BASIC17.54■□□□□ 0.4
SHDQ96IW2 TSC22D3-213ENST00000506081 956 ntTSL 5 BASIC17.54■□□□□ 0.4
SHDQ96IW2 RN7SL204P-201ENST00000582831 262 ntBASIC17.54■□□□□ 0.4
SHDQ96IW2 AC099522.2-201ENST00000607001 744 ntBASIC17.54■□□□□ 0.4
SHDQ96IW2 AL161645.1-201ENST00000622716 1255 ntBASIC17.54■□□□□ 0.4
SHDQ96IW2 HIST1H3D-202ENST00000635200 948 ntAPPRIS P1 TSL 3 BASIC17.54■□□□□ 0.4
SHDQ96IW2 NPRL2-201ENST00000232501 1700 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
SHDQ96IW2 TFAP2D-201ENST00000008391 1711 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
SHDQ96IW2 AC135782.1-201ENST00000537498 2154 ntTSL 2 BASIC17.54■□□□□ 0.4
SHDQ96IW2 PLCH2-203ENST00000378486 4837 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
SHDQ96IW2 PLCH2-204ENST00000419816 4837 ntAPPRIS P1 TSL 5 BASIC17.54■□□□□ 0.4
SHDQ96IW2 PRKCSH-209ENST00000589838 1898 ntAPPRIS P3 TSL 1 (best) BASIC17.54■□□□□ 0.4
SHDQ96IW2 SHANK3-203ENST00000445220 5175 ntAPPRIS ALT2 TSL 5 BASIC17.54■□□□□ 0.4
SHDQ96IW2 PIP4K2A-206ENST00000545335 1436 ntTSL 2 BASIC17.54■□□□□ 0.4
SHDQ96IW2 PCDHAC2-201ENST00000289269 5963 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
SHDQ96IW2 SKIDA1-202ENST00000449193 6598 ntAPPRIS P2 TSL 3 BASIC17.54■□□□□ 0.4
SHDQ96IW2 NUAK1-201ENST00000261402 6828 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
SHDQ96IW2 PHLDA3-202ENST00000367311 2640 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
SHDQ96IW2 IQCJ-SCHIP1-207ENST00000638749 2633 ntAPPRIS P3 TSL 1 (best) BASIC17.53■□□□□ 0.4
SHDQ96IW2 ADRA1A-202ENST00000354550 1765 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
SHDQ96IW2 AL031598.1-201ENST00000561511 1773 ntBASIC17.53■□□□□ 0.4
SHDQ96IW2 GABARAPL1-201ENST00000266458 1957 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
SHDQ96IW2 SIKE1-201ENST00000060969 2190 ntAPPRIS P3 TSL 1 (best) BASIC17.53■□□□□ 0.4
SHDQ96IW2 FAM43B-201ENST00000332947 2572 ntAPPRIS P1 BASIC17.53■□□□□ 0.4
SHDQ96IW2 ELP5-201ENST00000354429 1304 ntAPPRIS P2 TSL 5 BASIC17.53■□□□□ 0.4
SHDQ96IW2 COMMD5-202ENST00000402718 1305 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
SHDQ96IW2 EIF4A1-203ENST00000577269 1319 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
SHDQ96IW2 CCDC189-204ENST00000541260 1531 ntTSL 5 BASIC17.53■□□□□ 0.4
SHDQ96IW2 AC006974.1-201ENST00000637928 1501 ntTSL 5 BASIC17.53■□□□□ 0.4
SHDQ96IW2 AC099684.1-202ENST00000425277 1747 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
SHDQ96IW2 ADAM15-207ENST00000368413 1901 ntTSL 5 BASIC17.53■□□□□ 0.4
SHDQ96IW2 PSMB11-201ENST00000408907 2110 ntAPPRIS P1 BASIC17.53■□□□□ 0.4
SHDQ96IW2 TINAGL1-202ENST00000457433 2140 ntAPPRIS ALT2 TSL 2 BASIC17.53■□□□□ 0.4
SHDQ96IW2 MID1IP1-201ENST00000336949 2536 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
SHDQ96IW2 FAM46A-203ENST00000369756 5537 ntAPPRIS ALT2 TSL 1 (best) BASIC17.53■□□□□ 0.4
SHDQ96IW2 ADAP1-205ENST00000449296 2093 ntTSL 2 BASIC17.53■□□□□ 0.4
SHDQ96IW2 EVA1C-202ENST00000382699 1668 ntAPPRIS ALT1 TSL 1 (best) BASIC17.53■□□□□ 0.4
SHDQ96IW2 ZCCHC17-205ENST00000615916 1652 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
SHDQ96IW2 ZSCAN2-205ENST00000379358 906 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
SHDQ96IW2 ARRB2-203ENST00000381488 1236 ntTSL 2 BASIC17.53■□□□□ 0.4
SHDQ96IW2 CENPM-205ENST00000404067 905 ntTSL 3 BASIC17.53■□□□□ 0.4
Retrieved 100 of 98,524 protein–RNA pairs in 24.1 ms