Protein–RNA interactions for Protein: Q96FT9

IFT43, Intraflagellar transport protein 43 homolog, humanhuman

Predictions only

Length 208 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
IFT43Q96FT9 RTBDN-213ENST00000592204 1024 ntAPPRIS ALT2 TSL 1 (best) BASIC18.07■□□□□ 0.48
IFT43Q96FT9 LRRC23-209ENST00000443597 1628 ntAPPRIS P4 TSL 1 (best) BASIC18.07■□□□□ 0.48
IFT43Q96FT9 SUPT20H-202ENST00000356185 2681 ntAPPRIS P3 TSL 1 (best) BASIC18.07■□□□□ 0.48
IFT43Q96FT9 ASB13-201ENST00000357700 2699 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
IFT43Q96FT9 ACTB-201ENST00000331789 1917 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
IFT43Q96FT9 IRF7-207ENST00000525445 1588 ntTSL 5 BASIC18.07■□□□□ 0.48
IFT43Q96FT9 HSPB9-201ENST00000565659 1922 ntAPPRIS P1 BASIC18.07■□□□□ 0.48
IFT43Q96FT9 PCDHGA12-202ENST00000613314 2634 ntAPPRIS ALT2 BASIC18.07■□□□□ 0.48
IFT43Q96FT9 SEMA6B-201ENST00000586582 3986 ntAPPRIS P2 TSL 1 (best) BASIC18.07■□□□□ 0.48
IFT43Q96FT9 LINC00683-201ENST00000578803 2221 ntTSL 2 BASIC18.07■□□□□ 0.48
IFT43Q96FT9 NOL4-211ENST00000589544 2221 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
IFT43Q96FT9 AC005833.1-201ENST00000280684 4237 ntAPPRIS P1 BASIC18.07■□□□□ 0.48
IFT43Q96FT9 ACAP1-201ENST00000158762 2512 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
IFT43Q96FT9 RABL2A-204ENST00000393167 2179 ntAPPRIS P3 TSL 1 (best) BASIC18.07■□□□□ 0.48
IFT43Q96FT9 CDC25A-201ENST00000302506 3783 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
IFT43Q96FT9 LRRC29-201ENST00000393992 1468 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
IFT43Q96FT9 ZNF264-202ENST00000536056 2078 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
IFT43Q96FT9 NOMO2-202ENST00000381474 3911 ntAPPRIS ALT2 TSL 5 BASIC18.06■□□□□ 0.48
IFT43Q96FT9 SEPT2-208ENST00000407971 3267 ntTSL 5 BASIC18.06■□□□□ 0.48
IFT43Q96FT9 MRPS5-201ENST00000272418 1652 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
IFT43Q96FT9 SEMA6C-209ENST00000613223 1950 ntTSL 5 BASIC18.06■□□□□ 0.48
IFT43Q96FT9 SLC47A2-202ENST00000350657 2285 ntAPPRIS ALT2 TSL 1 (best) BASIC18.06■□□□□ 0.48
IFT43Q96FT9 TRIM15-207ENST00000376694 2214 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
IFT43Q96FT9 LINC00960-201ENST00000463183 1333 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
IFT43Q96FT9 TAX1BP3-202ENST00000611779 1302 ntTSL 2 BASIC18.06■□□□□ 0.48
IFT43Q96FT9 PPP2R5B-201ENST00000164133 2745 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
IFT43Q96FT9 NT5E-202ENST00000369646 974 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
IFT43Q96FT9 SEC61G-203ENST00000415949 732 ntAPPRIS P1 TSL 5 BASIC18.06■□□□□ 0.48
IFT43Q96FT9 NAT6-202ENST00000417393 1163 ntAPPRIS ALT2 TSL 1 (best) BASIC18.06■□□□□ 0.48
IFT43Q96FT9 FDX1P1-201ENST00000449115 551 ntBASIC18.06■□□□□ 0.48
IFT43Q96FT9 RPP14-206ENST00000466547 805 ntAPPRIS P1 TSL 3 BASIC18.06■□□□□ 0.48
IFT43Q96FT9 KRT18P31-201ENST00000506277 1292 ntBASIC18.06■□□□□ 0.48
IFT43Q96FT9 PDCD2L-203ENST00000587065 492 ntTSL 3 BASIC18.06■□□□□ 0.48
IFT43Q96FT9 AC022150.1-201ENST00000599222 640 ntTSL 3 BASIC18.06■□□□□ 0.48
IFT43Q96FT9 H2BFWT-202ENST00000611083 528 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
IFT43Q96FT9 AL592071.1-201ENST00000611956 408 ntBASIC18.06■□□□□ 0.48
IFT43Q96FT9 LINC01714-202ENST00000635451 896 ntTSL 5 BASIC18.06■□□□□ 0.48
IFT43Q96FT9 RIC8A-208ENST00000527696 2565 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
IFT43Q96FT9 C18orf8-208ENST00000590868 2002 ntTSL 2 BASIC18.06■□□□□ 0.48
IFT43Q96FT9 GOLGA2P9-203ENST00000600260 2033 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
IFT43Q96FT9 PRSS36-201ENST00000268281 2840 ntAPPRIS P3 TSL 1 (best) BASIC18.06■□□□□ 0.48
IFT43Q96FT9 IFRD1-202ENST00000403825 2290 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
IFT43Q96FT9 NEXN-AS1-201ENST00000421331 2292 ntTSL 2 BASIC18.06■□□□□ 0.48
IFT43Q96FT9 PLCB2-201ENST00000260402 4616 ntAPPRIS P3 TSL 2 BASIC18.06■□□□□ 0.48
IFT43Q96FT9 RBM17-201ENST00000379888 2755 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
IFT43Q96FT9 AC018695.7-201ENST00000624587 2492 ntBASIC18.06■□□□□ 0.48
IFT43Q96FT9 CDH23-205ENST00000398809 4533 ntTSL 5 BASIC18.06■□□□□ 0.48
IFT43Q96FT9 ZDHHC8-202ENST00000334554 5046 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
IFT43Q96FT9 CARNS1-202ENST00000445895 3971 ntAPPRIS P1 TSL 5 BASIC18.06■□□□□ 0.48
IFT43Q96FT9 ACSS2-201ENST00000253382 2925 ntTSL 2 BASIC18.05■□□□□ 0.48
IFT43Q96FT9 IL34-201ENST00000288098 1607 ntAPPRIS P2 TSL 1 (best) BASIC18.05■□□□□ 0.48
IFT43Q96FT9 CTSA-204ENST00000372484 2149 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
IFT43Q96FT9 TCTN1-204ENST00000397659 1885 ntAPPRIS P4 TSL 1 (best) BASIC18.05■□□□□ 0.48
IFT43Q96FT9 KIF25-203ENST00000443060 1613 ntAPPRIS P1 TSL 5 BASIC18.05■□□□□ 0.48
IFT43Q96FT9 CXXC5-211ENST00000511048 1892 ntAPPRIS P1 TSL 2 BASIC18.05■□□□□ 0.48
IFT43Q96FT9 KRT8P47-201ENST00000604727 1398 ntBASIC18.05■□□□□ 0.48
IFT43Q96FT9 GPD2-201ENST00000310454 6041 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
IFT43Q96FT9 CCDC154-202ENST00000409671 2561 ntAPPRIS ALT2 TSL 1 (best) BASIC18.05■□□□□ 0.48
IFT43Q96FT9 HS3ST2-201ENST00000261374 2314 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
IFT43Q96FT9 FAM214B-206ENST00000603301 3256 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
IFT43Q96FT9 GINM1-201ENST00000367419 2024 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
IFT43Q96FT9 CLUH-201ENST00000435359 5224 ntAPPRIS P2 TSL 5 BASIC18.05■□□□□ 0.48
IFT43Q96FT9 C6orf15-201ENST00000259870 1140 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
IFT43Q96FT9 HDDC3-201ENST00000330334 1047 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
IFT43Q96FT9 RPL8-202ENST00000394920 965 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
IFT43Q96FT9 CRELD2-202ENST00000403427 1242 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
IFT43Q96FT9 ZNF655-218ENST00000454654 571 ntTSL 4 BASIC18.05■□□□□ 0.48
IFT43Q96FT9 ARSK-202ENST00000504763 1088 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
IFT43Q96FT9 COX6C-204ENST00000520271 571 ntAPPRIS P1 TSL 2 BASIC18.05■□□□□ 0.48
IFT43Q96FT9 MYL6-209ENST00000548293 753 ntAPPRIS P3 TSL 2 BASIC18.05■□□□□ 0.48
IFT43Q96FT9 FCGRT-210ENST00000596975 1054 ntTSL 5 BASIC18.05■□□□□ 0.48
IFT43Q96FT9 HNF4A-208ENST00000609795 1192 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
IFT43Q96FT9 CYP1B1-AS1-214ENST00000620177 554 ntTSL 4 BASIC18.05■□□□□ 0.48
IFT43Q96FT9 NAA50-201ENST00000240922 6135 ntAPPRIS P3 TSL 1 (best) BASIC18.05■□□□□ 0.48
IFT43Q96FT9 SALL3-202ENST00000537592 6555 ntAPPRIS P1 TSL 5 BASIC18.05■□□□□ 0.48
IFT43Q96FT9 MFSD2A-202ENST00000372811 2154 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
IFT43Q96FT9 AC002310.2-202ENST00000492040 1488 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
IFT43Q96FT9 SNRK-204ENST00000454177 2961 ntAPPRIS P1 TSL 2 BASIC18.05■□□□□ 0.48
IFT43Q96FT9 IRF3-202ENST00000377135 1442 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
IFT43Q96FT9 VGLL4-210ENST00000426568 1428 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
IFT43Q96FT9 BLCAP-201ENST00000373537 2073 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
IFT43Q96FT9 PGRMC2-207ENST00000520121 3785 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
IFT43Q96FT9 TSSK2-201ENST00000399635 1816 ntAPPRIS P1 BASIC18.05■□□□□ 0.48
IFT43Q96FT9 PDS5A-201ENST00000303538 7176 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
IFT43Q96FT9 APEH-202ENST00000438011 2249 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
IFT43Q96FT9 NAA50-209ENST00000497525 1385 ntTSL 2 BASIC18.04■□□□□ 0.48
IFT43Q96FT9 ZAP70-201ENST00000264972 2437 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
IFT43Q96FT9 DKK3-201ENST00000326932 2636 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
IFT43Q96FT9 KLK5-201ENST00000336334 1563 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
IFT43Q96FT9 GPANK1-201ENST00000375893 1598 ntAPPRIS P1 TSL 5 BASIC18.04■□□□□ 0.48
IFT43Q96FT9 PPRC1-201ENST00000278070 5330 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
IFT43Q96FT9 CTSB-232ENST00000534510 1989 ntAPPRIS P1 TSL 5 BASIC18.04■□□□□ 0.48
IFT43Q96FT9 SLC8A3-203ENST00000357887 5259 ntTSL 5 BASIC18.04■□□□□ 0.48
IFT43Q96FT9 SLC8A3-204ENST00000381269 5268 ntAPPRIS ALT1 TSL 1 (best) BASIC18.04■□□□□ 0.48
IFT43Q96FT9 MYZAP-201ENST00000267853 2361 ntAPPRIS P3 TSL 1 (best) BASIC18.04■□□□□ 0.48
IFT43Q96FT9 A4GALT-203ENST00000401850 2321 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
IFT43Q96FT9 ARHGAP11A-201ENST00000361627 5898 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
IFT43Q96FT9 RNPS1-203ENST00000397086 2069 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
IFT43Q96FT9 AC008969.1-203ENST00000313957 1897 ntTSL 2 BASIC18.04■□□□□ 0.48
IFT43Q96FT9 THEG-201ENST00000342640 1877 ntAPPRIS P4 TSL 1 (best) BASIC18.04■□□□□ 0.48
Retrieved 100 of 98,524 protein–RNA pairs in 26.8 ms