Protein–RNA interactions for Protein: Q96F63

CCDC97, Coiled-coil domain-containing protein 97, humanhuman

Predicted RBP Predictions only

Length 343 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC97Q96F63 SLC37A2-203ENST00000403796 2910 ntAPPRIS ALT1 TSL 2 BASIC17.89■□□□□ 0.46
CCDC97Q96F63 CHTF8-203ENST00000448552 2903 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.46
CCDC97Q96F63 TRIM13-206ENST00000457662 1489 ntAPPRIS P3 TSL 1 (best) BASIC17.89■□□□□ 0.45
CCDC97Q96F63 FAM157B-201ENST00000446912 1795 ntTSL 2 BASIC17.89■□□□□ 0.45
CCDC97Q96F63 DUS1L-201ENST00000306796 2068 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
CCDC97Q96F63 XRRA1-202ENST00000340360 5681 ntAPPRIS P1 TSL 5 BASIC17.89■□□□□ 0.45
CCDC97Q96F63 PAM-206ENST00000438793 5432 ntAPPRIS ALT1 TSL 1 (best) BASIC17.89■□□□□ 0.45
CCDC97Q96F63 CABIN1-202ENST00000337989 2422 ntAPPRIS ALT2 TSL 1 (best) BASIC17.89■□□□□ 0.45
CCDC97Q96F63 LBHD1-210ENST00000532208 1508 ntAPPRIS P2 TSL 5 BASIC17.89■□□□□ 0.45
CCDC97Q96F63 RUNX1T1-251ENST00000615601 7372 ntAPPRIS ALT1 TSL 5 BASIC17.89■□□□□ 0.45
CCDC97Q96F63 PPP2CA-203ENST00000481195 4649 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
CCDC97Q96F63 HIBCH-202ENST00000392332 2463 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
CCDC97Q96F63 LTF-203ENST00000426532 2494 ntTSL 2 BASIC17.89■□□□□ 0.45
CCDC97Q96F63 IFT140-203ENST00000426508 5270 ntAPPRIS P1 TSL 5 BASIC17.89■□□□□ 0.45
CCDC97Q96F63 SPAG9-205ENST00000505279 4659 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
CCDC97Q96F63 ZNF575-201ENST00000314228 1298 ntAPPRIS P1 TSL 2 BASIC17.89■□□□□ 0.45
CCDC97Q96F63 PPIH-202ENST00000372549 327 ntTSL 3 BASIC17.89■□□□□ 0.45
CCDC97Q96F63 HMGN1-203ENST00000380748 829 ntTSL 3 BASIC17.89■□□□□ 0.45
CCDC97Q96F63 AC092159.3-201ENST00000439196 571 ntTSL 4 BASIC17.89■□□□□ 0.45
CCDC97Q96F63 ARSK-202ENST00000504763 1088 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
CCDC97Q96F63 LINC01582-202ENST00000561215 452 ntTSL 4 BASIC17.89■□□□□ 0.45
CCDC97Q96F63 NAA38-203ENST00000575071 553 ntTSL 2 BASIC17.89■□□□□ 0.45
CCDC97Q96F63 AC004771.4-201ENST00000576752 474 ntTSL 5 BASIC17.89■□□□□ 0.45
CCDC97Q96F63 IL11-204ENST00000590625 1028 ntTSL 2 BASIC17.89■□□□□ 0.45
CCDC97Q96F63 SEL1L-204ENST00000555824 1631 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
CCDC97Q96F63 SH3BP4-203ENST00000409212 5231 ntAPPRIS P1 TSL 5 BASIC17.89■□□□□ 0.45
CCDC97Q96F63 C8orf49-201ENST00000525043 1968 ntBASIC17.89■□□□□ 0.45
CCDC97Q96F63 BBC3-201ENST00000300880 1347 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
CCDC97Q96F63 TRIM36-202ENST00000379617 1322 ntTSL 2 BASIC17.89■□□□□ 0.45
CCDC97Q96F63 SLC39A5-201ENST00000266980 2031 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
CCDC97Q96F63 ZBTB9-201ENST00000395064 2716 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
CCDC97Q96F63 CLEC4G-201ENST00000328853 1360 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
CCDC97Q96F63 PTPRN2-204ENST00000404321 1374 ntTSL 5 BASIC17.89■□□□□ 0.45
CCDC97Q96F63 AC016734.2-201ENST00000624325 1377 ntBASIC17.89■□□□□ 0.45
CCDC97Q96F63 WWOX-203ENST00000406884 1701 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
CCDC97Q96F63 ZNF385A-202ENST00000352268 2076 ntTSL 2 BASIC17.89■□□□□ 0.45
CCDC97Q96F63 SLX1B-SULT1A4-201ENST00000344620 2424 ntTSL 2 BASIC17.89■□□□□ 0.45
CCDC97Q96F63 AC068587.6-202ENST00000641839 5619 ntBASIC17.89■□□□□ 0.45
CCDC97Q96F63 ERI1-203ENST00000519292 2107 ntAPPRIS P1 TSL 2 BASIC17.89■□□□□ 0.45
CCDC97Q96F63 C19orf25-207ENST00000588871 2128 ntTSL 5 BASIC17.89■□□□□ 0.45
CCDC97Q96F63 DKK1-201ENST00000373970 1790 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
CCDC97Q96F63 FDXR-205ENST00000544854 1827 ntTSL 2 BASIC17.88■□□□□ 0.45
CCDC97Q96F63 LEMD3-201ENST00000308330 4764 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
CCDC97Q96F63 CACNB3-202ENST00000536187 1872 ntTSL 2 BASIC17.88■□□□□ 0.45
CCDC97Q96F63 AC068880.1-201ENST00000507289 2297 ntBASIC17.88■□□□□ 0.45
CCDC97Q96F63 YY1AP1-210ENST00000368339 3073 ntAPPRIS ALT2 TSL 2 BASIC17.88■□□□□ 0.45
CCDC97Q96F63 NOX4-201ENST00000263317 2388 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
CCDC97Q96F63 FOLH1-204ENST00000356696 2403 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
CCDC97Q96F63 RNFT2-204ENST00000407967 2415 ntTSL 5 BASIC17.88■□□□□ 0.45
CCDC97Q96F63 SPOCK2-202ENST00000373109 5445 ntAPPRIS P2 TSL 1 (best) BASIC17.88■□□□□ 0.45
CCDC97Q96F63 AC090206.1-201ENST00000615734 1678 ntTSL 5 BASIC17.88■□□□□ 0.45
CCDC97Q96F63 YBEY-201ENST00000329319 1019 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
CCDC97Q96F63 HIST1H2AI-201ENST00000358739 503 ntAPPRIS P1 BASIC17.88■□□□□ 0.45
CCDC97Q96F63 ISG15-201ENST00000379389 711 ntAPPRIS P2 TSL 1 (best) BASIC17.88■□□□□ 0.45
CCDC97Q96F63 YBEY-206ENST00000397701 744 ntAPPRIS P1 TSL 2 BASIC17.88■□□□□ 0.45
CCDC97Q96F63 LINC01315-202ENST00000424852 1142 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
CCDC97Q96F63 LINC01128-207ENST00000449005 874 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
CCDC97Q96F63 AC113404.2-201ENST00000507884 177 ntBASIC17.88■□□□□ 0.45
CCDC97Q96F63 VEGFA-222ENST00000520948 1199 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
CCDC97Q96F63 AC092118.1-202ENST00000568697 718 ntTSL 3 BASIC17.88■□□□□ 0.45
CCDC97Q96F63 SMIM22-203ENST00000588500 525 ntAPPRIS ALT2 TSL 1 (best) BASIC17.88■□□□□ 0.45
CCDC97Q96F63 GPR32P1-201ENST00000601788 811 ntBASIC17.88■□□□□ 0.45
CCDC97Q96F63 AL121772.3-201ENST00000610840 674 ntBASIC17.88■□□□□ 0.45
CCDC97Q96F63 GPALPP1-207ENST00000611650 899 ntBASIC17.88■□□□□ 0.45
CCDC97Q96F63 SSBP1-215ENST00000612337 884 ntAPPRIS P1 TSL 2 BASIC17.88■□□□□ 0.45
CCDC97Q96F63 NRBP1-204ENST00000379863 2174 ntTSL 5 BASIC17.88■□□□□ 0.45
CCDC97Q96F63 CPEB2-205ENST00000442003 6797 ntAPPRIS ALT2 TSL 5 BASIC17.88■□□□□ 0.45
CCDC97Q96F63 COPS7A-210ENST00000539735 1832 ntAPPRIS P1 TSL 5 BASIC17.88■□□□□ 0.45
CCDC97Q96F63 KL-201ENST00000380099 5006 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
CCDC97Q96F63 AL353692.3-201ENST00000407031 1396 ntBASIC17.88■□□□□ 0.45
CCDC97Q96F63 B3GALNT1-202ENST00000392779 3221 ntAPPRIS P1 TSL 2 BASIC17.88■□□□□ 0.45
CCDC97Q96F63 RABEP2-202ENST00000358201 2821 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
CCDC97Q96F63 PROSER2-201ENST00000277570 3333 ntAPPRIS P2 TSL 1 (best) BASIC17.88■□□□□ 0.45
CCDC97Q96F63 TMEM263-204ENST00000548125 3349 ntAPPRIS P1 TSL 2 BASIC17.88■□□□□ 0.45
CCDC97Q96F63 ATP6AP2-214ENST00000636287 1904 ntAPPRIS ALT2 TSL 5 BASIC17.88■□□□□ 0.45
CCDC97Q96F63 SLC22A1-203ENST00000457470 1452 ntTSL 5 BASIC17.88■□□□□ 0.45
CCDC97Q96F63 SLC22A11-202ENST00000377581 1975 ntTSL 5 BASIC17.88■□□□□ 0.45
CCDC97Q96F63 PGAP3-203ENST00000378011 2533 ntTSL 2 BASIC17.88■□□□□ 0.45
CCDC97Q96F63 MCOLN1-201ENST00000264079 2082 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
CCDC97Q96F63 AC008764.6-201ENST00000595909 2069 ntBASIC17.87■□□□□ 0.45
CCDC97Q96F63 BTNL9-202ENST00000376841 1626 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
CCDC97Q96F63 DSCR9-201ENST00000454482 1644 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
CCDC97Q96F63 AC134043.2-201ENST00000624206 2238 ntBASIC17.87■□□□□ 0.45
CCDC97Q96F63 FAM72C-201ENST00000369175 1658 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
CCDC97Q96F63 PRELID3A-203ENST00000587735 1694 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
CCDC97Q96F63 FAM72B-207ENST00000619376 1659 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
CCDC97Q96F63 CD40-202ENST00000372285 1729 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
CCDC97Q96F63 MRI1-201ENST00000040663 1735 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
CCDC97Q96F63 QPRT-202ENST00000395384 2343 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
CCDC97Q96F63 IL17RC-206ENST00000416074 2342 ntAPPRIS ALT2 TSL 1 (best) BASIC17.87■□□□□ 0.45
CCDC97Q96F63 MAGEA3-203ENST00000598245 1762 ntAPPRIS P1 TSL 2 BASIC17.87■□□□□ 0.45
CCDC97Q96F63 MAGEA6-204ENST00000616035 1762 ntAPPRIS P1 TSL 5 BASIC17.87■□□□□ 0.45
CCDC97Q96F63 PIGQ-203ENST00000321878 3006 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
CCDC97Q96F63 STXBP2-201ENST00000221283 1876 ntAPPRIS P3 TSL 1 (best) BASIC17.87■□□□□ 0.45
CCDC97Q96F63 CYP4F8-210ENST00000612078 1889 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
CCDC97Q96F63 CPZ-203ENST00000382480 2538 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
CCDC97Q96F63 ZNF414-201ENST00000255616 1178 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
CCDC97Q96F63 HAAO-201ENST00000294973 1265 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
CCDC97Q96F63 GNG5-202ENST00000370645 790 ntAPPRIS P1 TSL 2 BASIC17.87■□□□□ 0.45
CCDC97Q96F63 CST3-202ENST00000398409 832 ntAPPRIS P1 TSL 3 BASIC17.87■□□□□ 0.45
Retrieved 100 of 98,524 protein–RNA pairs in 31.2 ms