Protein–RNA interactions for Protein: Q96BI3

APH1A, Gamma-secretase subunit APH-1A, humanhuman

Predictions only

Length 265 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APH1AQ96BI3 PDS5A-201ENST00000303538 7176 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
APH1AQ96BI3 DCAF4-201ENST00000353777 1940 ntTSL 1 (best) BASIC15.52■□□□□ 0.07
APH1AQ96BI3 BCS1L-202ENST00000392109 1583 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
APH1AQ96BI3 BCS1L-204ENST00000392111 1584 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
APH1AQ96BI3 NOC2LP2-201ENST00000407594 1944 ntBASIC15.52■□□□□ 0.07
APH1AQ96BI3 AL356309.3-201ENST00000624132 1934 ntBASIC15.52■□□□□ 0.07
APH1AQ96BI3 BAG3-201ENST00000369085 2571 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
APH1AQ96BI3 BORCS6-201ENST00000389017 2575 ntAPPRIS P1 BASIC15.52■□□□□ 0.07
APH1AQ96BI3 AC134043.2-201ENST00000624206 2238 ntBASIC15.52■□□□□ 0.07
APH1AQ96BI3 PTPRJ-202ENST00000440289 3158 ntTSL 1 (best) BASIC15.52■□□□□ 0.07
APH1AQ96BI3 PCCB-207ENST00000466072 1844 ntAPPRIS ALT2 TSL 3 BASIC15.52■□□□□ 0.07
APH1AQ96BI3 SREK1-216ENST00000612404 2128 ntTSL 1 (best) BASIC15.52■□□□□ 0.07
APH1AQ96BI3 ACTN4-201ENST00000252699 4963 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
APH1AQ96BI3 DIDO1-203ENST00000370366 2383 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
APH1AQ96BI3 SVOPL-204ENST00000436657 1420 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
APH1AQ96BI3 CYP2D6-204ENST00000389970 1714 ntTSL 5 BASIC15.51■□□□□ 0.07
APH1AQ96BI3 HS3ST2-201ENST00000261374 2314 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
APH1AQ96BI3 ARMC10-209ENST00000454559 2347 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
APH1AQ96BI3 MCU-201ENST00000357157 2874 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
APH1AQ96BI3 DAPK1-202ENST00000408954 5892 ntAPPRIS P1 TSL 2 BASIC15.51■□□□□ 0.07
APH1AQ96BI3 TRIM15-207ENST00000376694 2214 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
APH1AQ96BI3 PCDHA1-202ENST00000394633 2204 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
APH1AQ96BI3 ALAS2-203ENST00000396198 1936 ntTSL 5 BASIC15.51■□□□□ 0.07
APH1AQ96BI3 CGB7-202ENST00000596965 1949 ntAPPRIS P1 TSL 2 BASIC15.51■□□□□ 0.07
APH1AQ96BI3 HLA-J-201ENST00000462773 1622 ntBASIC15.51■□□□□ 0.07
APH1AQ96BI3 AL355312.1-201ENST00000407115 2176 ntBASIC15.51■□□□□ 0.07
APH1AQ96BI3 LINC00304-203ENST00000565008 1864 ntBASIC15.51■□□□□ 0.07
APH1AQ96BI3 GPSM2-201ENST00000264126 3032 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
APH1AQ96BI3 BRPF1-201ENST00000383829 4736 ntAPPRIS ALT1 TSL 1 (best) BASIC15.51■□□□□ 0.07
APH1AQ96BI3 RNASEH2A-201ENST00000221486 1165 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
APH1AQ96BI3 ZNHIT1-201ENST00000305105 1225 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
APH1AQ96BI3 SIGLEC8-202ENST00000340550 1293 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
APH1AQ96BI3 DNASE1L2-202ENST00000382437 1222 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
APH1AQ96BI3 FAM3A-205ENST00000393572 1041 ntTSL 2 BASIC15.51■□□□□ 0.07
APH1AQ96BI3 AC079781.3-201ENST00000449110 356 ntBASIC15.51■□□□□ 0.07
APH1AQ96BI3 STK25P1-201ENST00000585406 838 ntBASIC15.51■□□□□ 0.07
APH1AQ96BI3 AC087645.2-201ENST00000586321 799 ntTSL 3 BASIC15.51■□□□□ 0.07
APH1AQ96BI3 TST-204ENST00000622841 1105 ntAPPRIS P1 TSL 5 BASIC15.51■□□□□ 0.07
APH1AQ96BI3 NPAS4-204ENST00000639555 878 ntTSL 5 BASIC15.51■□□□□ 0.07
APH1AQ96BI3 AC022916.1-201ENST00000590478 2658 ntTSL 2 BASIC15.51■□□□□ 0.07
APH1AQ96BI3 ISLR2-203ENST00000435464 4259 ntAPPRIS P1 TSL 2 BASIC15.51■□□□□ 0.07
APH1AQ96BI3 ZNF205-206ENST00000620094 2309 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
APH1AQ96BI3 CTSB-204ENST00000453527 2011 ntAPPRIS P1 TSL 2 BASIC15.51■□□□□ 0.07
APH1AQ96BI3 BAGE2-202ENST00000474011 1482 ntTSL 2 BASIC15.51■□□□□ 0.07
APH1AQ96BI3 AC105411.1-202ENST00000565050 1476 ntTSL 5 BASIC15.51■□□□□ 0.07
APH1AQ96BI3 ASIC3-201ENST00000297512 1718 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
APH1AQ96BI3 CCDC92-201ENST00000238156 2787 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
APH1AQ96BI3 UQCRC1-201ENST00000203407 1985 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
APH1AQ96BI3 GABRG3-206ENST00000555083 1405 ntTSL 2 BASIC15.51■□□□□ 0.07
APH1AQ96BI3 ASB13-201ENST00000357700 2699 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
APH1AQ96BI3 COL8A2-202ENST00000397799 4670 ntAPPRIS P1 TSL 5 BASIC15.5■□□□□ 0.07
APH1AQ96BI3 MYZAP-201ENST00000267853 2361 ntAPPRIS P3 TSL 1 (best) BASIC15.5■□□□□ 0.07
APH1AQ96BI3 C16orf70-208ENST00000569600 1353 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
APH1AQ96BI3 ANAPC11-211ENST00000575195 1361 ntAPPRIS P1 TSL 2 BASIC15.5■□□□□ 0.07
APH1AQ96BI3 TRAPPC11-201ENST00000334690 4552 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
APH1AQ96BI3 PPP2R2B-203ENST00000394411 2071 ntAPPRIS P1 TSL 2 BASIC15.5■□□□□ 0.07
APH1AQ96BI3 AC132938.5-201ENST00000624980 1813 ntBASIC15.5■□□□□ 0.07
APH1AQ96BI3 HAUS8-201ENST00000253669 1568 ntAPPRIS P3 TSL 1 (best) BASIC15.5■□□□□ 0.07
APH1AQ96BI3 UBE2Q2-208ENST00000569423 2969 ntTSL 2 BASIC15.5■□□□□ 0.07
APH1AQ96BI3 PGRMC1-202ENST00000535419 1762 ntTSL 2 BASIC15.5■□□□□ 0.07
APH1AQ96BI3 PSMA1-209ENST00000530457 1527 ntTSL 5 BASIC15.5■□□□□ 0.07
APH1AQ96BI3 DCTN3-201ENST00000259632 808 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
APH1AQ96BI3 MCL1-201ENST00000307940 1110 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
APH1AQ96BI3 DMKN-206ENST00000418261 1257 ntAPPRIS ALT2 TSL 1 (best) BASIC15.5■□□□□ 0.07
APH1AQ96BI3 AL020989.1-201ENST00000422979 469 ntBASIC15.5■□□□□ 0.07
APH1AQ96BI3 STK19B-204ENST00000512515 211 ntBASIC15.5■□□□□ 0.07
APH1AQ96BI3 AC135586.2-201ENST00000537262 567 ntAPPRIS P1 TSL 4 BASIC15.5■□□□□ 0.07
APH1AQ96BI3 BLOC1S1-204ENST00000549147 1229 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
APH1AQ96BI3 AL160237.2-201ENST00000556165 472 ntBASIC15.5■□□□□ 0.07
APH1AQ96BI3 AC127496.4-201ENST00000571591 549 ntTSL 4 BASIC15.5■□□□□ 0.07
APH1AQ96BI3 FAM25C-201ENST00000617224 319 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
APH1AQ96BI3 TGDS-201ENST00000261296 1905 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
APH1AQ96BI3 AATK-201ENST00000326724 5257 ntAPPRIS P3 TSL 5 BASIC15.5■□□□□ 0.07
APH1AQ96BI3 SOD2-215ENST00000546087 2558 ntTSL 2 BASIC15.5■□□□□ 0.07
APH1AQ96BI3 AC133963.1-201ENST00000504166 1679 ntBASIC15.5■□□□□ 0.07
APH1AQ96BI3 ARHGAP11A-201ENST00000361627 5898 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
APH1AQ96BI3 STAP2-201ENST00000594605 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC15.5■□□□□ 0.07
APH1AQ96BI3 CALM3-201ENST00000291295 2289 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
APH1AQ96BI3 TBPL1-208ENST00000613034 1625 ntAPPRIS P1 TSL 2 BASIC15.5■□□□□ 0.07
APH1AQ96BI3 AC079776.2-201ENST00000641154 1609 ntBASIC15.5■□□□□ 0.07
APH1AQ96BI3 EIF2AK4-201ENST00000263791 5499 ntAPPRIS P1 TSL 2 BASIC15.5■□□□□ 0.07
APH1AQ96BI3 CHAC1-202ENST00000446533 1849 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
APH1AQ96BI3 SCP2-202ENST00000371513 2003 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
APH1AQ96BI3 CTTN-203ENST00000376561 2247 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
APH1AQ96BI3 MICA-209ENST00000449934 1386 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
APH1AQ96BI3 SEC14L2-215ENST00000617837 2632 ntTSL 2 BASIC15.49■□□□□ 0.07
APH1AQ96BI3 HHATL-201ENST00000310417 1750 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
APH1AQ96BI3 ZNF804A-201ENST00000302277 4690 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
APH1AQ96BI3 NRBP1-203ENST00000379852 2163 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
APH1AQ96BI3 GNE-204ENST00000539208 2190 ntTSL 2 BASIC15.49■□□□□ 0.07
APH1AQ96BI3 SDR39U1-206ENST00000553930 1325 ntTSL 5 BASIC15.49■□□□□ 0.07
APH1AQ96BI3 APOA5-203ENST00000542499 1929 ntAPPRIS P1 TSL 5 BASIC15.49■□□□□ 0.07
APH1AQ96BI3 DUS3L-201ENST00000309061 2113 ntAPPRIS P3 TSL 1 (best) BASIC15.49■□□□□ 0.07
APH1AQ96BI3 IL17RC-206ENST00000416074 2342 ntAPPRIS ALT2 TSL 1 (best) BASIC15.49■□□□□ 0.07
APH1AQ96BI3 CTSB-202ENST00000353047 3875 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
APH1AQ96BI3 AC127496.1-202ENST00000573602 2091 ntTSL 2 BASIC15.49■□□□□ 0.07
APH1AQ96BI3 THEG-201ENST00000342640 1877 ntAPPRIS P4 TSL 1 (best) BASIC15.49■□□□□ 0.07
APH1AQ96BI3 WDR1-205ENST00000502702 1691 ntTSL 5 BASIC15.49■□□□□ 0.07
APH1AQ96BI3 IFNL4-204ENST00000634967 1493 ntAPPRIS ALT2 TSL 1 (best) BASIC15.49■□□□□ 0.07
APH1AQ96BI3 PRSS27-201ENST00000302641 1130 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Retrieved 100 of 98,524 protein–RNA pairs in 37.4 ms