Protein–RNA interactions for Protein: Q969V3

NCLN, Nicalin, humanhuman

Predictions only

Length 563 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NCLNQ969V3 CLCN2-204ENST00000434054 2897 ntAPPRIS ALT2 TSL 2 BASIC17.02■□□□□ 0.31
NCLNQ969V3 PRCC-201ENST00000271526 2105 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
NCLNQ969V3 CHRNB4-202ENST00000412074 1355 ntTSL 1 (best) BASIC17.02■□□□□ 0.31
NCLNQ969V3 LINC01554-202ENST00000436592 2052 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
NCLNQ969V3 CYP2U1-202ENST00000508453 3125 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
NCLNQ969V3 COL2A1-202ENST00000380518 5071 ntAPPRIS ALT1 TSL 1 (best) BASIC17.01■□□□□ 0.31
NCLNQ969V3 GBX2-203ENST00000551105 1307 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
NCLNQ969V3 DAPK2-205ENST00000558069 1473 ntTSL 5 BASIC17.01■□□□□ 0.31
NCLNQ969V3 LPAR5-202ENST00000431922 2695 ntAPPRIS P1 TSL 2 BASIC17.01■□□□□ 0.31
NCLNQ969V3 TAF1C-222ENST00000570117 2349 ntAPPRIS ALT2 TSL 2 BASIC17.01■□□□□ 0.31
NCLNQ969V3 AGBL5-202ENST00000360131 3177 ntAPPRIS P3 TSL 1 (best) BASIC17.01■□□□□ 0.31
NCLNQ969V3 LINC01126-201ENST00000623515 1646 ntBASIC17.01■□□□□ 0.31
NCLNQ969V3 SLC22A3-201ENST00000275300 3348 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
NCLNQ969V3 NDUFAF2-201ENST00000296597 719 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
NCLNQ969V3 DUS3L-201ENST00000309061 2113 ntAPPRIS P3 TSL 1 (best) BASIC17.01■□□□□ 0.31
NCLNQ969V3 NDUFA1-201ENST00000371437 766 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
NCLNQ969V3 PDLIM7-205ENST00000393551 1226 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
NCLNQ969V3 CFLAR-208ENST00000423241 2128 ntAPPRIS P3 TSL 1 (best) BASIC17.01■□□□□ 0.31
NCLNQ969V3 LY6E-209ENST00000521003 740 ntAPPRIS P2 TSL 2 BASIC17.01■□□□□ 0.31
NCLNQ969V3 KRTCAP3-207ENST00000543753 956 ntAPPRIS P1 TSL 5 BASIC17.01■□□□□ 0.31
NCLNQ969V3 AC140504.1-202ENST00000568222 652 ntTSL 5 BASIC17.01■□□□□ 0.31
NCLNQ969V3 RNF126P1-202ENST00000569893 925 ntBASIC17.01■□□□□ 0.31
NCLNQ969V3 MIR2117HG-201ENST00000588060 506 ntTSL 4 BASIC17.01■□□□□ 0.31
NCLNQ969V3 TEN1-204ENST00000588202 862 ntTSL 3 BASIC17.01■□□□□ 0.31
NCLNQ969V3 TK1-205ENST00000590862 642 ntTSL 3 BASIC17.01■□□□□ 0.31
NCLNQ969V3 AC011498.5-201ENST00000592027 486 ntBASIC17.01■□□□□ 0.31
NCLNQ969V3 SPAG6-203ENST00000376624 2605 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
NCLNQ969V3 ZNF211-211ENST00000541801 2629 ntAPPRIS ALT2 TSL 3 BASIC17.01■□□□□ 0.31
NCLNQ969V3 AC084018.2-201ENST00000613093 2607 ntBASIC17.01■□□□□ 0.31
NCLNQ969V3 RCAN3-202ENST00000374395 6802 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
NCLNQ969V3 SPSB3-201ENST00000301717 1449 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
NCLNQ969V3 POMC-204ENST00000405623 1426 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
NCLNQ969V3 A4GALT-202ENST00000381278 1935 ntAPPRIS P1 TSL 5 BASIC17.01■□□□□ 0.31
NCLNQ969V3 AL731569.1-201ENST00000428940 3058 ntTSL 2 BASIC17.01■□□□□ 0.31
NCLNQ969V3 ZNF302-201ENST00000423823 2590 ntAPPRIS P3 TSL 1 (best) BASIC17.01■□□□□ 0.31
NCLNQ969V3 TPBG-203ENST00000543496 2881 ntAPPRIS P1 TSL 2 BASIC17.01■□□□□ 0.31
NCLNQ969V3 DHCR7-201ENST00000355527 2666 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
NCLNQ969V3 IRGC-201ENST00000244314 1662 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
NCLNQ969V3 FGFR4-207ENST00000502906 2638 ntAPPRIS P4 TSL 1 (best) BASIC17■□□□□ 0.31
NCLNQ969V3 RBCK1-202ENST00000356286 2774 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
NCLNQ969V3 RASA4-202ENST00000449970 2787 ntAPPRIS ALT1 TSL 2 BASIC17■□□□□ 0.31
NCLNQ969V3 GABARAPL1-201ENST00000266458 1957 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
NCLNQ969V3 ARID5A-203ENST00000454558 3079 ntTSL 1 (best) BASIC17■□□□□ 0.31
NCLNQ969V3 COQ6-201ENST00000334571 2118 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
NCLNQ969V3 MSLNL-201ENST00000442466 2109 ntAPPRIS P1 TSL 5 BASIC17■□□□□ 0.31
NCLNQ969V3 FLJ16779-201ENST00000612722 7638 ntBASIC17■□□□□ 0.31
NCLNQ969V3 ZNF211-201ENST00000240731 2440 ntAPPRIS P4 TSL 2 BASIC17■□□□□ 0.31
NCLNQ969V3 PDE4A-201ENST00000293683 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC17■□□□□ 0.31
NCLNQ969V3 INPP5J-207ENST00000405300 2515 ntTSL 1 (best) BASIC17■□□□□ 0.31
NCLNQ969V3 YKT6-201ENST00000223369 2696 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
NCLNQ969V3 RHOT1-201ENST00000333942 3133 ntAPPRIS ALT1 TSL 1 (best) BASIC17■□□□□ 0.31
NCLNQ969V3 ELF2-204ENST00000394235 4012 ntAPPRIS P1 TSL 5 BASIC17■□□□□ 0.31
NCLNQ969V3 FAM86B2-202ENST00000309608 806 ntTSL 3 BASIC17■□□□□ 0.31
NCLNQ969V3 ATP6V0C-201ENST00000330398 1175 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
NCLNQ969V3 RRM2-202ENST00000360566 3673 ntTSL 1 (best) BASIC17■□□□□ 0.31
NCLNQ969V3 DNM3-203ENST00000367733 2322 ntTSL 1 (best) BASIC17■□□□□ 0.31
NCLNQ969V3 TBPL1-203ENST00000367871 808 ntTSL 2 BASIC17■□□□□ 0.31
NCLNQ969V3 PRDM1-203ENST00000369096 5164 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
NCLNQ969V3 CYP2D6-204ENST00000389970 1714 ntTSL 5 BASIC17■□□□□ 0.31
NCLNQ969V3 SEMA3B-204ENST00000433753 2755 ntAPPRIS ALT1 TSL 1 (best) BASIC17■□□□□ 0.31
NCLNQ969V3 DMKN-212ENST00000443640 842 ntAPPRIS ALT2 TSL 5 BASIC17■□□□□ 0.31
NCLNQ969V3 HOXB-AS3-203ENST00000465846 434 ntTSL 3 BASIC17■□□□□ 0.31
NCLNQ969V3 SURF4-206ENST00000485435 1206 ntTSL 1 (best) BASIC17■□□□□ 0.31
NCLNQ969V3 ACY1-210ENST00000494103 1298 ntTSL 3 BASIC17■□□□□ 0.31
NCLNQ969V3 NTF4-201ENST00000593537 932 ntAPPRIS P1 BASIC17■□□□□ 0.31
NCLNQ969V3 AC093458.2-201ENST00000623150 629 ntBASIC17■□□□□ 0.31
NCLNQ969V3 FZD4-201ENST00000531380 7383 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
NCLNQ969V3 ALDH3B1-204ENST00000614849 2280 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
NCLNQ969V3 WDR13-201ENST00000218056 2124 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
NCLNQ969V3 EWSR1-202ENST00000332035 1989 ntAPPRIS ALT2 TSL 2 BASIC17■□□□□ 0.31
NCLNQ969V3 SLC22A11-202ENST00000377581 1975 ntTSL 5 BASIC17■□□□□ 0.31
NCLNQ969V3 ZNF256-202ENST00000598928 1958 ntTSL 1 (best) BASIC17■□□□□ 0.31
NCLNQ969V3 RECQL4-210ENST00000621189 3896 ntTSL 1 (best) BASIC17■□□□□ 0.31
NCLNQ969V3 RIMS1-210ENST00000491071 5047 ntTSL 5 BASIC17■□□□□ 0.31
NCLNQ969V3 CLEC4G-201ENST00000328853 1360 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
NCLNQ969V3 DNM2-201ENST00000355667 3541 ntTSL 1 (best) BASIC17■□□□□ 0.31
NCLNQ969V3 IGSF8-201ENST00000314485 2343 ntAPPRIS P2 TSL 1 (best) BASIC16.99■□□□□ 0.31
NCLNQ969V3 AC026954.2-202ENST00000575474 2571 ntAPPRIS P5 TSL 5 BASIC16.99■□□□□ 0.31
NCLNQ969V3 PIANP-204ENST00000540656 2432 ntAPPRIS P3 TSL 2 BASIC16.99■□□□□ 0.31
NCLNQ969V3 DOCK7-203ENST00000404627 2678 ntTSL 2 BASIC16.99■□□□□ 0.31
NCLNQ969V3 CAMK2B-203ENST00000347193 1577 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
NCLNQ969V3 LINC00311-201ENST00000366314 1566 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
NCLNQ969V3 TBC1D9B-201ENST00000355235 5119 ntAPPRIS P3 TSL 5 BASIC16.99■□□□□ 0.31
NCLNQ969V3 TRIM11-202ENST00000366699 2511 ntTSL 2 BASIC16.99■□□□□ 0.31
NCLNQ969V3 CSTB-204ENST00000640406 2354 ntTSL 2 BASIC16.99■□□□□ 0.31
NCLNQ969V3 SPAG9-205ENST00000505279 4659 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
NCLNQ969V3 CARD11-203ENST00000396946 4366 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
NCLNQ969V3 ZNF414-201ENST00000255616 1178 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
NCLNQ969V3 UFSP1-201ENST00000388761 996 ntAPPRIS P1 BASIC16.99■□□□□ 0.31
NCLNQ969V3 SCO2-202ENST00000395693 992 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
NCLNQ969V3 GGT1-208ENST00000404920 657 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
NCLNQ969V3 VCX3B-203ENST00000444481 812 ntAPPRIS ALT2 TSL 5 BASIC16.99■□□□□ 0.31
NCLNQ969V3 MHENCR-202ENST00000449500 801 ntTSL 2 BASIC16.99■□□□□ 0.31
NCLNQ969V3 GGTLC2-203ENST00000480559 657 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
NCLNQ969V3 LINC01582-202ENST00000561215 452 ntTSL 4 BASIC16.99■□□□□ 0.31
NCLNQ969V3 LIMD2-211ENST00000583211 1298 ntTSL 3 BASIC16.99■□□□□ 0.31
NCLNQ969V3 AC005332.3-201ENST00000589904 676 ntBASIC16.99■□□□□ 0.31
NCLNQ969V3 AC069148.1-201ENST00000608741 768 ntBASIC16.99■□□□□ 0.31
NCLNQ969V3 VCX3A-203ENST00000612369 812 ntAPPRIS ALT2 TSL 5 BASIC16.99■□□□□ 0.31
NCLNQ969V3 KRT13-201ENST00000246635 1699 ntAPPRIS P4 TSL 1 (best) BASIC16.99■□□□□ 0.31
Retrieved 100 of 98,524 protein–RNA pairs in 29.5 ms