Protein–RNA interactions for Protein: Q969T4

UBE2E3, Ubiquitin-conjugating enzyme E2 E3, humanhuman

Predictions only

Length 207 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2E3Q969T4 VRK1-201ENST00000216639 1745 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
UBE2E3Q969T4 HAUS8-201ENST00000253669 1568 ntAPPRIS P3 TSL 1 (best) BASIC16.83■□□□□ 0.28
UBE2E3Q969T4 OBSL1-201ENST00000289656 2274 ntTSL 5 BASIC16.83■□□□□ 0.28
UBE2E3Q969T4 ST8SIA5-201ENST00000315087 2716 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
UBE2E3Q969T4 EXOC5-201ENST00000340918 2632 ntTSL 2 BASIC16.83■□□□□ 0.28
UBE2E3Q969T4 RPA2-202ENST00000373909 1162 ntTSL 3 BASIC16.83■□□□□ 0.28
UBE2E3Q969T4 KRTAP5-6-201ENST00000382160 561 ntAPPRIS P1 BASIC16.83■□□□□ 0.28
UBE2E3Q969T4 ANHX-201ENST00000419717 1765 ntAPPRIS P1 TSL 2 BASIC16.83■□□□□ 0.28
UBE2E3Q969T4 IGHV3-47-201ENST00000425060 335 ntBASIC16.83■□□□□ 0.28
UBE2E3Q969T4 CROCCP1-201ENST00000426910 5675 ntBASIC16.83■□□□□ 0.28
UBE2E3Q969T4 LAMTOR4-205ENST00000468582 621 ntTSL 2 BASIC16.83■□□□□ 0.28
UBE2E3Q969T4 AC096582.2-201ENST00000510860 516 ntBASIC16.83■□□□□ 0.28
UBE2E3Q969T4 TNIP1-211ENST00000521591 2274 ntAPPRIS P3 TSL 1 (best) BASIC16.83■□□□□ 0.28
UBE2E3Q969T4 MPI-205ENST00000562606 1052 ntTSL 3 BASIC16.83■□□□□ 0.28
UBE2E3Q969T4 ANAPC11-211ENST00000575195 1361 ntAPPRIS P1 TSL 2 BASIC16.83■□□□□ 0.28
UBE2E3Q969T4 AC020916.1-201ENST00000587762 1774 ntBASIC16.83■□□□□ 0.28
UBE2E3Q969T4 SLC7A9-202ENST00000587772 1568 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
UBE2E3Q969T4 TK1-204ENST00000590430 683 ntTSL 3 BASIC16.83■□□□□ 0.28
UBE2E3Q969T4 SMIM8-209ENST00000608868 815 ntAPPRIS P1 TSL 5 BASIC16.83■□□□□ 0.28
UBE2E3Q969T4 AC139713.2-201ENST00000641328 2723 ntBASIC16.83■□□□□ 0.28
UBE2E3Q969T4 PRR29-AS1-202ENST00000580942 2926 ntTSL 2 BASIC16.83■□□□□ 0.28
UBE2E3Q969T4 TCIRG1-201ENST00000265686 2677 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
UBE2E3Q969T4 STRN4-204ENST00000539396 2608 ntTSL 2 BASIC16.83■□□□□ 0.28
UBE2E3Q969T4 SLC29A2-206ENST00000546034 2509 ntAPPRIS P1 TSL 5 BASIC16.83■□□□□ 0.28
UBE2E3Q969T4 RECK-201ENST00000377966 4888 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
UBE2E3Q969T4 C9orf64-203ENST00000376344 2443 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
UBE2E3Q969T4 SAMD3-202ENST00000368134 2377 ntAPPRIS P1 TSL 2 BASIC16.82■□□□□ 0.28
UBE2E3Q969T4 GMDS-AS1-201ENST00000456943 2308 ntTSL 2 BASIC16.82■□□□□ 0.28
UBE2E3Q969T4 PP12613-201ENST00000424958 2230 ntBASIC16.82■□□□□ 0.28
UBE2E3Q969T4 BPIFB4-201ENST00000375483 2159 ntAPPRIS P1 TSL 5 BASIC16.82■□□□□ 0.28
UBE2E3Q969T4 RNH1-205ENST00000397615 2014 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
UBE2E3Q969T4 FAM234A-202ENST00000301679 1936 ntTSL 2 BASIC16.82■□□□□ 0.28
UBE2E3Q969T4 A4GALT-202ENST00000381278 1935 ntAPPRIS P1 TSL 5 BASIC16.82■□□□□ 0.28
UBE2E3Q969T4 ROCK2-209ENST00000616279 6401 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
UBE2E3Q969T4 KMT5B-205ENST00000402789 1599 ntTSL 5 BASIC16.82■□□□□ 0.28
UBE2E3Q969T4 ZADH2-201ENST00000322342 7732 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
UBE2E3Q969T4 EIF3B-201ENST00000360876 3055 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
UBE2E3Q969T4 AL353593.2-201ENST00000602529 1483 ntBASIC16.82■□□□□ 0.28
UBE2E3Q969T4 KDM6A-211ENST00000536777 5633 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
UBE2E3Q969T4 PRKRA-203ENST00000432031 1344 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
UBE2E3Q969T4 NEK10-202ENST00000341435 2638 ntTSL 2 BASIC16.82■□□□□ 0.28
UBE2E3Q969T4 SP3-203ENST00000418194 3937 ntAPPRIS ALT2 TSL 1 (best) BASIC16.82■□□□□ 0.28
UBE2E3Q969T4 MOGS-205ENST00000452063 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC16.82■□□□□ 0.28
UBE2E3Q969T4 MRPL43-203ENST00000318364 1010 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
UBE2E3Q969T4 MRPL43-204ENST00000342071 894 ntTSL 5 BASIC16.82■□□□□ 0.28
UBE2E3Q969T4 ENSA-206ENST00000361631 725 ntTSL 2 BASIC16.82■□□□□ 0.28
UBE2E3Q969T4 NFIB-201ENST00000380921 1274 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
UBE2E3Q969T4 AC003688.1-201ENST00000577138 489 ntAPPRIS P1 TSL 3 BASIC16.82■□□□□ 0.28
UBE2E3Q969T4 STK25P1-201ENST00000585406 838 ntBASIC16.82■□□□□ 0.28
UBE2E3Q969T4 AC008687.7-201ENST00000593309 920 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
UBE2E3Q969T4 AC010422.3-201ENST00000597692 838 ntAPPRIS P1 TSL 2 BASIC16.82■□□□□ 0.28
UBE2E3Q969T4 AC114341.1-201ENST00000618070 349 ntBASIC16.82■□□□□ 0.28
UBE2E3Q969T4 LCE1E-203ENST00000619588 267 ntAPPRIS ALT2 TSL 5 BASIC16.82■□□□□ 0.28
UBE2E3Q969T4 PTPN6-204ENST00000456013 2389 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
UBE2E3Q969T4 DNM3-203ENST00000367733 2322 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
UBE2E3Q969T4 MMP9-201ENST00000372330 2336 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
UBE2E3Q969T4 HFE2-201ENST00000336751 2234 ntAPPRIS P1 TSL 2 BASIC16.82■□□□□ 0.28
UBE2E3Q969T4 ARID1A-205ENST00000457599 6268 ntAPPRIS ALT2 TSL 5 BASIC16.82■□□□□ 0.28
UBE2E3Q969T4 EPHA10-201ENST00000319637 2050 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
UBE2E3Q969T4 CBX6-202ENST00000407418 6122 ntAPPRIS P3 TSL 1 (best) BASIC16.82■□□□□ 0.28
UBE2E3Q969T4 C5orf24-202ENST00000394976 5065 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
UBE2E3Q969T4 CCT7-215ENST00000539919 2031 ntTSL 2 BASIC16.82■□□□□ 0.28
UBE2E3Q969T4 SYBU-224ENST00000529690 1983 ntAPPRIS ALT2 TSL 2 BASIC16.82■□□□□ 0.28
UBE2E3Q969T4 CXorf67-201ENST00000342995 1929 ntAPPRIS P1 BASIC16.82■□□□□ 0.28
UBE2E3Q969T4 RABEP2-202ENST00000358201 2821 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
UBE2E3Q969T4 ARHGEF5-202ENST00000471847 1862 ntAPPRIS ALT2 TSL 1 (best) BASIC16.82■□□□□ 0.28
UBE2E3Q969T4 NSUN5P2-201ENST00000388955 1789 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
UBE2E3Q969T4 LINC00905-202ENST00000588117 1768 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
UBE2E3Q969T4 MAPKAPK3-201ENST00000357955 2500 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
UBE2E3Q969T4 PLTP-202ENST00000372420 1530 ntTSL 2 BASIC16.81■□□□□ 0.28
UBE2E3Q969T4 SMARCA4-215ENST00000590574 5282 ntAPPRIS ALT1 TSL 5 BASIC16.81■□□□□ 0.28
UBE2E3Q969T4 APOA4-201ENST00000357780 1473 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
UBE2E3Q969T4 NKIRAS2-207ENST00000449471 1461 ntTSL 2 BASIC16.81■□□□□ 0.28
UBE2E3Q969T4 NFATC1-210ENST00000587635 2195 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
UBE2E3Q969T4 ABHD11-205ENST00000437775 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC16.81■□□□□ 0.28
UBE2E3Q969T4 KRT8P10-201ENST00000450021 1447 ntBASIC16.81■□□□□ 0.28
UBE2E3Q969T4 AL645608.8-201ENST00000606034 2086 ntBASIC16.81■□□□□ 0.28
UBE2E3Q969T4 ORAI2-205ENST00000478730 5531 ntAPPRIS P1 TSL 2 BASIC16.81■□□□□ 0.28
UBE2E3Q969T4 PPP1R3E-201ENST00000452015 4773 ntAPPRIS P1 TSL 2 BASIC16.81■□□□□ 0.28
UBE2E3Q969T4 ARHGAP4-204ENST00000393721 2721 ntTSL 5 BASIC16.81■□□□□ 0.28
UBE2E3Q969T4 SLC12A9-202ENST00000415287 1912 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
UBE2E3Q969T4 HSPA1A-202ENST00000608703 1909 ntTSL 2 BASIC16.81■□□□□ 0.28
UBE2E3Q969T4 C6orf15-201ENST00000259870 1140 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
UBE2E3Q969T4 AC003669.1-201ENST00000334569 611 ntBASIC16.81■□□□□ 0.28
UBE2E3Q969T4 NPFFR2-202ENST00000344413 1234 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
UBE2E3Q969T4 BOLA1-201ENST00000369150 811 ntAPPRIS P1 TSL 3 BASIC16.81■□□□□ 0.28
UBE2E3Q969T4 PFDN6-201ENST00000374606 740 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
UBE2E3Q969T4 UBE2J2-204ENST00000400929 1057 ntTSL 3 BASIC16.81■□□□□ 0.28
UBE2E3Q969T4 AC069368.1-202ENST00000437723 750 ntAPPRIS P1 TSL 5 BASIC16.81■□□□□ 0.28
UBE2E3Q969T4 AL162258.2-202ENST00000469931 831 ntTSL 5 BASIC16.81■□□□□ 0.28
UBE2E3Q969T4 NDUFB9-202ENST00000517367 636 ntTSL 3 BASIC16.81■□□□□ 0.28
UBE2E3Q969T4 NBPF14-202ENST00000593495 1082 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
UBE2E3Q969T4 BNIP3P18-201ENST00000593976 575 ntBASIC16.81■□□□□ 0.28
UBE2E3Q969T4 AC092119.3-201ENST00000612618 583 ntBASIC16.81■□□□□ 0.28
UBE2E3Q969T4 ADGRB2-206ENST00000398556 4879 ntAPPRIS ALT2 TSL 5 BASIC16.81■□□□□ 0.28
UBE2E3Q969T4 MZT1-201ENST00000377818 2299 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
UBE2E3Q969T4 FBXL5-202ENST00000412094 2837 ntAPPRIS ALT1 TSL 1 (best) BASIC16.81■□□□□ 0.28
UBE2E3Q969T4 U2AF2-201ENST00000308924 1698 ntAPPRIS P3 TSL 1 (best) BASIC16.81■□□□□ 0.28
UBE2E3Q969T4 SH2D3C-203ENST00000373277 2750 ntAPPRIS ALT2 TSL 1 (best) BASIC16.81■□□□□ 0.28
UBE2E3Q969T4 TSC2-204ENST00000401874 5421 ntAPPRIS ALT2 TSL 1 (best) BASIC16.81■□□□□ 0.28
Retrieved 100 of 98,524 protein–RNA pairs in 56.4 ms