Protein–RNA interactions for Protein: Q8NEP3

DNAAF1, Dynein assembly factor 1, axonemal, humanhuman

Predictions only

Length 725 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DNAAF1Q8NEP3 VEGFA-205ENST00000372067 3535 ntAPPRIS ALT2 TSL 1 (best) BASIC15.43■□□□□ 0.06
DNAAF1Q8NEP3 C22orf39-205ENST00000542103 1523 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
DNAAF1Q8NEP3 RGS3-202ENST00000342620 1714 ntTSL 5 BASIC15.43■□□□□ 0.06
DNAAF1Q8NEP3 XPO5-201ENST00000265351 5364 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
DNAAF1Q8NEP3 WDR13-202ENST00000376729 5469 ntAPPRIS P1 TSL 5 BASIC15.43■□□□□ 0.06
DNAAF1Q8NEP3 ZBTB5-201ENST00000307750 4627 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
DNAAF1Q8NEP3 AGGF1P2-201ENST00000426656 2106 ntBASIC15.43■□□□□ 0.06
DNAAF1Q8NEP3 MAEA-202ENST00000303400 2222 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
DNAAF1Q8NEP3 AL365277.1-202ENST00000331856 2241 ntTSL 2 BASIC15.43■□□□□ 0.06
DNAAF1Q8NEP3 PRDM5-203ENST00000428209 2338 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
DNAAF1Q8NEP3 FAM227A-201ENST00000355830 2417 ntAPPRIS P5 TSL 5 BASIC15.43■□□□□ 0.06
DNAAF1Q8NEP3 ADRA1A-204ENST00000380573 2548 ntAPPRIS P1 TSL 2 BASIC15.43■□□□□ 0.06
DNAAF1Q8NEP3 RAB33B-201ENST00000305626 4562 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
DNAAF1Q8NEP3 GIGYF1-201ENST00000275732 6530 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
DNAAF1Q8NEP3 MPC2-201ENST00000271373 798 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
DNAAF1Q8NEP3 OR10H2-201ENST00000305899 1041 ntAPPRIS P1 BASIC15.43■□□□□ 0.06
DNAAF1Q8NEP3 CHTOP-202ENST00000368687 1094 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
DNAAF1Q8NEP3 AC019068.1-202ENST00000483218 768 ntTSL 3 BASIC15.43■□□□□ 0.06
DNAAF1Q8NEP3 AC015961.2-201ENST00000589281 701 ntTSL 3 BASIC15.43■□□□□ 0.06
DNAAF1Q8NEP3 KRT89P-201ENST00000620027 1478 ntBASIC15.43■□□□□ 0.06
DNAAF1Q8NEP3 PRAG1-201ENST00000615670 4903 ntAPPRIS P1 TSL 5 BASIC15.43■□□□□ 0.06
DNAAF1Q8NEP3 MORN1-203ENST00000378531 1798 ntAPPRIS P3 TSL 2 BASIC15.43■□□□□ 0.06
DNAAF1Q8NEP3 SLC22A18-203ENST00000380574 1755 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
DNAAF1Q8NEP3 FSCN1-201ENST00000382361 2777 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
DNAAF1Q8NEP3 CDK19-202ENST00000368911 6246 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
DNAAF1Q8NEP3 FEM1C-201ENST00000274457 5816 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
DNAAF1Q8NEP3 MAP3K9-201ENST00000381250 4025 ntAPPRIS ALT2 TSL 5 BASIC15.43■□□□□ 0.06
DNAAF1Q8NEP3 NIPA2-201ENST00000337451 3233 ntAPPRIS P1 TSL 5 BASIC15.43■□□□□ 0.06
DNAAF1Q8NEP3 PRSS16-201ENST00000230582 2716 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
DNAAF1Q8NEP3 ZBTB9-201ENST00000395064 2716 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
DNAAF1Q8NEP3 LMF1-201ENST00000262301 2621 ntAPPRIS P1 TSL 5 BASIC15.43■□□□□ 0.06
DNAAF1Q8NEP3 AL512625.1-201ENST00000305709 2541 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
DNAAF1Q8NEP3 CNGA3-205ENST00000436404 2504 ntAPPRIS ALT2 TSL 1 (best) BASIC15.43■□□□□ 0.06
DNAAF1Q8NEP3 PCDHGC3-205ENST00000617641 2346 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
DNAAF1Q8NEP3 FOXD4L4-201ENST00000377413 2230 ntAPPRIS P1 BASIC15.43■□□□□ 0.06
DNAAF1Q8NEP3 ANTXR1-201ENST00000303714 5859 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
DNAAF1Q8NEP3 CLEC18C-201ENST00000314151 1934 ntAPPRIS P2 TSL 1 (best) BASIC15.43■□□□□ 0.06
DNAAF1Q8NEP3 HSPB9-201ENST00000565659 1922 ntAPPRIS P1 BASIC15.43■□□□□ 0.06
DNAAF1Q8NEP3 CLEC18A-208ENST00000568461 1934 ntAPPRIS P2 TSL 1 (best) BASIC15.43■□□□□ 0.06
DNAAF1Q8NEP3 WDSUB1-203ENST00000392796 1812 ntAPPRIS P1 TSL 2 BASIC15.43■□□□□ 0.06
DNAAF1Q8NEP3 LAT-203ENST00000395456 1616 ntAPPRIS ALT2 TSL 1 (best) BASIC15.43■□□□□ 0.06
DNAAF1Q8NEP3 LTBP4-205ENST00000396819 4764 ntAPPRIS ALT2 TSL 1 (best) BASIC15.43■□□□□ 0.06
DNAAF1Q8NEP3 PTX4-201ENST00000293922 1422 ntAPPRIS P2 TSL 1 (best) BASIC15.43■□□□□ 0.06
DNAAF1Q8NEP3 CDX1-202ENST00000616154 1343 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
DNAAF1Q8NEP3 TSHZ1-204ENST00000580243 3582 ntAPPRIS P1 TSL 2 BASIC15.42■□□□□ 0.06
DNAAF1Q8NEP3 SLC35F3-202ENST00000366618 2891 ntAPPRIS P3 TSL 2 BASIC15.42■□□□□ 0.06
DNAAF1Q8NEP3 NKAIN1-201ENST00000373736 2589 ntAPPRIS P1 TSL 2 BASIC15.42■□□□□ 0.06
DNAAF1Q8NEP3 PCDHB19P-201ENST00000570871 2371 ntBASIC15.42■□□□□ 0.06
DNAAF1Q8NEP3 PCDHA14-201ENST00000506751 2298 ntBASIC15.42■□□□□ 0.06
DNAAF1Q8NEP3 ACTN4-201ENST00000252699 4963 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
DNAAF1Q8NEP3 TVP23C-204ENST00000438826 1852 ntAPPRIS ALT1 TSL 1 (best) BASIC15.42■□□□□ 0.06
DNAAF1Q8NEP3 CCDC63-202ENST00000545036 1887 ntAPPRIS ALT2 TSL 2 BASIC15.42■□□□□ 0.06
DNAAF1Q8NEP3 PDE9A-213ENST00000398236 1776 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
DNAAF1Q8NEP3 FGFR3-204ENST00000412135 3951 ntTSL 5 BASIC15.42■□□□□ 0.06
DNAAF1Q8NEP3 PCSK5-205ENST00000545128 9538 ntAPPRIS ALT2 TSL 5 BASIC15.42■□□□□ 0.06
DNAAF1Q8NEP3 HEYL-201ENST00000372852 3661 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
DNAAF1Q8NEP3 HCLS1-202ENST00000428394 1560 ntTSL 2 BASIC15.42■□□□□ 0.06
DNAAF1Q8NEP3 PNCK-203ENST00000370145 1455 ntTSL 2 BASIC15.42■□□□□ 0.06
DNAAF1Q8NEP3 ZFC3H1-211ENST00000552037 1484 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
DNAAF1Q8NEP3 PELP1-208ENST00000572293 5272 ntAPPRIS P2 TSL 1 (best) BASIC15.42■□□□□ 0.06
DNAAF1Q8NEP3 WLS-205ENST00000370976 2332 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
DNAAF1Q8NEP3 PLPP7-201ENST00000372261 972 ntTSL 2 BASIC15.42■□□□□ 0.06
DNAAF1Q8NEP3 DHRS4L2-202ENST00000397071 1117 ntTSL 2 BASIC15.42■□□□□ 0.06
DNAAF1Q8NEP3 DMKN-208ENST00000424570 1293 ntAPPRIS ALT2 TSL 1 (best) BASIC15.42■□□□□ 0.06
DNAAF1Q8NEP3 BAIAP2-205ENST00000435091 2129 ntAPPRIS ALT2 TSL 1 (best) BASIC15.42■□□□□ 0.06
DNAAF1Q8NEP3 CR769775.1-204ENST00000439760 747 ntTSL 5 BASIC15.42■□□□□ 0.06
DNAAF1Q8NEP3 CHCHD6-204ENST00000508789 1159 ntAPPRIS ALT2 TSL 1 (best) BASIC15.42■□□□□ 0.06
DNAAF1Q8NEP3 LINC02199-203ENST00000510229 496 ntTSL 3 BASIC15.42■□□□□ 0.06
DNAAF1Q8NEP3 TMA16-209ENST00000513272 803 ntTSL 2 BASIC15.42■□□□□ 0.06
DNAAF1Q8NEP3 AL132780.2-201ENST00000557615 1021 ntTSL 3 BASIC15.42■□□□□ 0.06
DNAAF1Q8NEP3 AC021739.3-201ENST00000557908 855 ntTSL 2 BASIC15.42■□□□□ 0.06
DNAAF1Q8NEP3 DET1-205ENST00000558413 583 ntTSL 4 BASIC15.42■□□□□ 0.06
DNAAF1Q8NEP3 AC025259.3-201ENST00000564531 542 ntTSL 3 BASIC15.42■□□□□ 0.06
DNAAF1Q8NEP3 AC006942.1-201ENST00000600669 520 ntTSL 2 BASIC15.42■□□□□ 0.06
DNAAF1Q8NEP3 AL157888.1-201ENST00000631930 593 ntBASIC15.42■□□□□ 0.06
DNAAF1Q8NEP3 AC141257.4-201ENST00000634557 245 ntBASIC15.42■□□□□ 0.06
DNAAF1Q8NEP3 AC136944.6-201ENST00000634818 245 ntBASIC15.42■□□□□ 0.06
DNAAF1Q8NEP3 ZNF496-201ENST00000294753 5336 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
DNAAF1Q8NEP3 AC060834.1-201ENST00000443027 2032 ntBASIC15.42■□□□□ 0.06
DNAAF1Q8NEP3 SCRIB-202ENST00000356994 5218 ntAPPRIS P4 TSL 2 BASIC15.42■□□□□ 0.06
DNAAF1Q8NEP3 PCDHA3-201ENST00000522353 5260 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
DNAAF1Q8NEP3 DICER1-AS1-204ENST00000554631 1709 ntTSL 2 BASIC15.42■□□□□ 0.06
DNAAF1Q8NEP3 KLHL42-201ENST00000381271 6703 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
DNAAF1Q8NEP3 JRK-211ENST00000615982 2823 ntAPPRIS ALT2 TSL 1 (best) BASIC15.42■□□□□ 0.06
DNAAF1Q8NEP3 CYP2D7-208ENST00000614967 1504 ntTSL 5 BASIC15.42■□□□□ 0.06
DNAAF1Q8NEP3 NTRK1-202ENST00000368196 2701 ntAPPRIS ALT2 TSL 1 (best) BASIC15.42■□□□□ 0.06
DNAAF1Q8NEP3 TNK2-AS1-201ENST00000458180 2096 ntTSL 2 BASIC15.42■□□□□ 0.06
DNAAF1Q8NEP3 SERINC2-205ENST00000536384 2062 ntTSL 2 BASIC15.42■□□□□ 0.06
DNAAF1Q8NEP3 TRIM73-205ENST00000450434 1425 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
DNAAF1Q8NEP3 GMDS-208ENST00000530927 1440 ntAPPRIS ALT2 TSL 1 (best) BASIC15.42■□□□□ 0.06
DNAAF1Q8NEP3 OGG1-206ENST00000349503 1950 ntTSL 5 BASIC15.42■□□□□ 0.06
DNAAF1Q8NEP3 TOP1MT-218ENST00000523676 1982 ntTSL 5 BASIC15.42■□□□□ 0.06
DNAAF1Q8NEP3 TMUB2-204ENST00000538716 1953 ntAPPRIS ALT1 TSL 2 BASIC15.42■□□□□ 0.06
DNAAF1Q8NEP3 GUCY1A2-202ENST00000347596 2532 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
DNAAF1Q8NEP3 H1FNT-201ENST00000335017 1300 ntAPPRIS P1 BASIC15.42■□□□□ 0.06
DNAAF1Q8NEP3 PSMD4-201ENST00000368881 1333 ntTSL 5 BASIC15.42■□□□□ 0.06
DNAAF1Q8NEP3 PROC-201ENST00000234071 1773 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
DNAAF1Q8NEP3 GPAT2-201ENST00000359548 2761 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
DNAAF1Q8NEP3 PFKP-202ENST00000381075 2769 ntTSL 2 BASIC15.41■□□□□ 0.06
DNAAF1Q8NEP3 DMPK-204ENST00000447742 2754 ntAPPRIS ALT2 TSL 1 (best) BASIC15.41■□□□□ 0.06
Retrieved 100 of 98,524 protein–RNA pairs in 28 ms