Protein–RNA interactions for Protein: Q8NBF2

NHLRC2, NHL repeat-containing protein 2, humanhuman

Predictions only

Length 726 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NHLRC2Q8NBF2 KCNJ8-201ENST00000240662 2389 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
NHLRC2Q8NBF2 CDC42EP4-201ENST00000335793 3272 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
NHLRC2Q8NBF2 ZFHX2-205ENST00000615307 1972 ntTSL 2 BASIC13.54□□□□□ -0.24
NHLRC2Q8NBF2 TRIM24-202ENST00000415680 3799 ntAPPRIS ALT2 TSL 1 (best) BASIC13.54□□□□□ -0.24
NHLRC2Q8NBF2 AC036111.1-201ENST00000533973 1582 ntBASIC13.54□□□□□ -0.24
NHLRC2Q8NBF2 NAP1L4-222ENST00000620138 2479 ntTSL 2 BASIC13.54□□□□□ -0.24
NHLRC2Q8NBF2 C4A-259ENST00000498271 5269 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
NHLRC2Q8NBF2 XRCC3-209ENST00000554913 2539 ntAPPRIS P1 TSL 2 BASIC13.54□□□□□ -0.24
NHLRC2Q8NBF2 KDM3A-201ENST00000312912 4886 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
NHLRC2Q8NBF2 UNC13B-201ENST00000378495 6303 ntAPPRIS P3 TSL 1 (best) BASIC13.54□□□□□ -0.24
NHLRC2Q8NBF2 RELT-201ENST00000064780 3535 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
NHLRC2Q8NBF2 LRRTM1-202ENST00000409148 2126 ntAPPRIS P1 TSL 4 BASIC13.54□□□□□ -0.24
NHLRC2Q8NBF2 PML-221ENST00000569965 2148 ntAPPRIS ALT2 TSL 1 (best) BASIC13.54□□□□□ -0.24
NHLRC2Q8NBF2 AKT1-214ENST00000555528 3066 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
NHLRC2Q8NBF2 BMP7-201ENST00000395863 4013 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
NHLRC2Q8NBF2 MYB-201ENST00000316528 3571 ntTSL 5 BASIC13.54□□□□□ -0.24
NHLRC2Q8NBF2 MYB-241ENST00000616088 3573 ntTSL 5 BASIC13.54□□□□□ -0.24
NHLRC2Q8NBF2 GRIN2A-201ENST00000330684 5031 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
NHLRC2Q8NBF2 TIMM8A-201ENST00000372902 1664 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
NHLRC2Q8NBF2 SEPT9-237ENST00000591198 2160 ntTSL 2 BASIC13.54□□□□□ -0.24
NHLRC2Q8NBF2 PLPPR2-201ENST00000251473 2727 ntAPPRIS P3 TSL 1 (best) BASIC13.54□□□□□ -0.24
NHLRC2Q8NBF2 MCF2L2-208ENST00000473233 4748 ntAPPRIS ALT2 TSL 5 BASIC13.54□□□□□ -0.24
NHLRC2Q8NBF2 MINDY2-203ENST00000559228 9238 ntAPPRIS P3 TSL 2 BASIC13.54□□□□□ -0.24
NHLRC2Q8NBF2 PRPF31-202ENST00000391755 1767 ntTSL 5 BASIC13.54□□□□□ -0.24
NHLRC2Q8NBF2 CLTA-202ENST00000345519 1073 ntAPPRIS ALT1 TSL 1 (best) BASIC13.54□□□□□ -0.24
NHLRC2Q8NBF2 FAM167B-201ENST00000373582 936 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
NHLRC2Q8NBF2 CRIP2-202ENST00000483017 1176 ntTSL 2 BASIC13.54□□□□□ -0.24
NHLRC2Q8NBF2 CHAC1-203ENST00000487220 853 ntTSL 3 BASIC13.54□□□□□ -0.24
NHLRC2Q8NBF2 LY6E-205ENST00000519611 635 ntTSL 3 BASIC13.54□□□□□ -0.24
NHLRC2Q8NBF2 LY6E-212ENST00000522024 868 ntAPPRIS P2 TSL 5 BASIC13.54□□□□□ -0.24
NHLRC2Q8NBF2 AC091564.2-201ENST00000527191 399 ntTSL 3 BASIC13.54□□□□□ -0.24
NHLRC2Q8NBF2 AC022167.3-201ENST00000564485 427 ntTSL 2 BASIC13.54□□□□□ -0.24
NHLRC2Q8NBF2 CR392000.1-201ENST00000624770 1228 ntBASIC13.54□□□□□ -0.24
NHLRC2Q8NBF2 AC073648.6-201ENST00000641589 218 ntBASIC13.54□□□□□ -0.24
NHLRC2Q8NBF2 PCDHGC3-205ENST00000617641 2346 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
NHLRC2Q8NBF2 P2RX3-204ENST00000616487 1346 ntTSL 5 BASIC13.54□□□□□ -0.24
NHLRC2Q8NBF2 AC105285.1-202ENST00000499322 1866 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
NHLRC2Q8NBF2 GPS2-201ENST00000380728 1379 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
NHLRC2Q8NBF2 C9orf62-201ENST00000623103 1924 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
NHLRC2Q8NBF2 ZFP90-203ENST00000563169 2512 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
NHLRC2Q8NBF2 MIS18BP1-212ENST00000627697 1950 ntTSL 5 BASIC13.54□□□□□ -0.24
NHLRC2Q8NBF2 SLC4A5-203ENST00000377632 3123 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
NHLRC2Q8NBF2 KRT16P1-201ENST00000399124 1418 ntBASIC13.54□□□□□ -0.24
NHLRC2Q8NBF2 AC068418.2-201ENST00000577309 3703 ntBASIC13.54□□□□□ -0.24
NHLRC2Q8NBF2 ARF1-214ENST00000541182 2006 ntAPPRIS P1 TSL 2 BASIC13.54□□□□□ -0.24
NHLRC2Q8NBF2 PTPN13-203ENST00000427191 8487 ntAPPRIS ALT2 TSL 1 (best) BASIC13.54□□□□□ -0.24
NHLRC2Q8NBF2 CD164L2-202ENST00000374027 1457 ntAPPRIS P3 TSL 1 (best) BASIC13.54□□□□□ -0.24
NHLRC2Q8NBF2 NXNL2-202ENST00000375855 1457 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
NHLRC2Q8NBF2 SH2B3-202ENST00000538307 2062 ntTSL 2 BASIC13.54□□□□□ -0.24
NHLRC2Q8NBF2 COQ8A-202ENST00000366778 2743 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
NHLRC2Q8NBF2 PROK2-202ENST00000353065 1549 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
NHLRC2Q8NBF2 AC132872.4-202ENST00000622924 2756 ntBASIC13.54□□□□□ -0.24
NHLRC2Q8NBF2 SLC34A2-202ENST00000503434 2174 ntAPPRIS ALT2 TSL 1 (best) BASIC13.54□□□□□ -0.24
NHLRC2Q8NBF2 SDK1-210ENST00000615806 10258 ntAPPRIS ALT2 TSL 5 BASIC13.54□□□□□ -0.24
NHLRC2Q8NBF2 ATP5L-201ENST00000300688 1577 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
NHLRC2Q8NBF2 LAT-203ENST00000395456 1616 ntAPPRIS ALT2 TSL 1 (best) BASIC13.53□□□□□ -0.24
NHLRC2Q8NBF2 SYTL2-215ENST00000527523 3049 ntTSL 2 BASIC13.53□□□□□ -0.24
NHLRC2Q8NBF2 CYMP-AS1-201ENST00000457402 2351 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
NHLRC2Q8NBF2 AGO3-202ENST00000324350 1726 ntTSL 2 BASIC13.53□□□□□ -0.24
NHLRC2Q8NBF2 ZNF385A-203ENST00000394313 2430 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
NHLRC2Q8NBF2 JAM2-202ENST00000400532 1757 ntAPPRIS ALT2 TSL 1 (best) BASIC13.53□□□□□ -0.24
NHLRC2Q8NBF2 SEC16A-202ENST00000290037 8982 ntAPPRIS ALT2 TSL 1 (best) BASIC13.53□□□□□ -0.24
NHLRC2Q8NBF2 MAPT-204ENST00000344290 6816 ntAPPRIS ALT2 TSL 1 (best) BASIC13.53□□□□□ -0.24
NHLRC2Q8NBF2 MYBPH-201ENST00000255416 1805 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
NHLRC2Q8NBF2 ANKRD24-206ENST00000600132 4026 ntAPPRIS P2 TSL 5 BASIC13.53□□□□□ -0.24
NHLRC2Q8NBF2 DDIT4L-201ENST00000273990 2604 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
NHLRC2Q8NBF2 AC008969.1-203ENST00000313957 1897 ntTSL 2 BASIC13.53□□□□□ -0.24
NHLRC2Q8NBF2 GPER1-202ENST00000397088 2639 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
NHLRC2Q8NBF2 TVP23C-204ENST00000438826 1852 ntAPPRIS ALT1 TSL 1 (best) BASIC13.53□□□□□ -0.24
NHLRC2Q8NBF2 AL024508.2-201ENST00000607749 1894 ntBASIC13.53□□□□□ -0.24
NHLRC2Q8NBF2 AC116565.2-201ENST00000637674 1854 ntTSL 2 BASIC13.53□□□□□ -0.24
NHLRC2Q8NBF2 EIF4H-201ENST00000265753 2679 ntAPPRIS P4 TSL 2 BASIC13.53□□□□□ -0.24
NHLRC2Q8NBF2 PCDHA1-201ENST00000378133 2726 ntBASIC13.53□□□□□ -0.24
NHLRC2Q8NBF2 ZNF767P-201ENST00000463567 3520 ntTSL 2 BASIC13.53□□□□□ -0.24
NHLRC2Q8NBF2 LONRF1-201ENST00000398246 3594 ntAPPRIS P1 TSL 5 BASIC13.53□□□□□ -0.24
NHLRC2Q8NBF2 C9orf172-201ENST00000436881 4387 ntAPPRIS P1 BASIC13.53□□□□□ -0.24
NHLRC2Q8NBF2 UNC13A-204ENST00000550896 5200 ntAPPRIS ALT2 TSL 5 BASIC13.53□□□□□ -0.24
NHLRC2Q8NBF2 TCTEX1D1-201ENST00000282670 2001 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
NHLRC2Q8NBF2 SLC9A5-201ENST00000299798 3736 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
NHLRC2Q8NBF2 PRSS57-201ENST00000329267 1025 ntAPPRIS ALT2 TSL 1 (best) BASIC13.53□□□□□ -0.24
NHLRC2Q8NBF2 LYPD5-202ENST00000414615 2137 ntAPPRIS P3 TSL 2 BASIC13.53□□□□□ -0.24
NHLRC2Q8NBF2 RPL29-202ENST00000466397 742 ntAPPRIS P1 TSL 2 BASIC13.53□□□□□ -0.24
NHLRC2Q8NBF2 PSMB5-205ENST00000493471 1117 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
NHLRC2Q8NBF2 TMEM235-204ENST00000551068 1187 ntAPPRIS P1 TSL 5 BASIC13.53□□□□□ -0.24
NHLRC2Q8NBF2 MIR4651-201ENST00000582622 73 ntBASIC13.53□□□□□ -0.24
NHLRC2Q8NBF2 MIR3180-5-201ENST00000583743 153 ntBASIC13.53□□□□□ -0.24
NHLRC2Q8NBF2 PRSS57-202ENST00000613411 1090 ntAPPRIS P3 TSL 1 (best) BASIC13.53□□□□□ -0.24
NHLRC2Q8NBF2 RECQL4-209ENST00000617875 3809 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
NHLRC2Q8NBF2 REST-211ENST00000640168 1268 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
NHLRC2Q8NBF2 MRPL4-202ENST00000307422 1320 ntAPPRIS P2 TSL 5 BASIC13.53□□□□□ -0.24
NHLRC2Q8NBF2 SACS-AS1-201ENST00000443092 2234 ntTSL 2 BASIC13.53□□□□□ -0.24
NHLRC2Q8NBF2 NIPA2-204ENST00000398014 3130 ntAPPRIS P1 TSL 5 BASIC13.53□□□□□ -0.24
NHLRC2Q8NBF2 ROPN1-209ENST00000495093 1376 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
NHLRC2Q8NBF2 SERPINH1-212ENST00000530284 1358 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
NHLRC2Q8NBF2 EPB41-205ENST00000373797 2402 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
NHLRC2Q8NBF2 FOXP1-218ENST00000498215 2400 ntAPPRIS P3 TSL 2 BASIC13.53□□□□□ -0.24
NHLRC2Q8NBF2 OR2C3-203ENST00000617752 2481 ntAPPRIS P1 BASIC13.53□□□□□ -0.24
NHLRC2Q8NBF2 ARHGEF10-201ENST00000349830 5590 ntAPPRIS P3 TSL 1 (best) BASIC13.53□□□□□ -0.24
NHLRC2Q8NBF2 AC005329.1-201ENST00000501448 3571 ntTSL 2 BASIC13.53□□□□□ -0.24
NHLRC2Q8NBF2 EIF4G1-212ENST00000424196 5653 ntTSL 2 BASIC13.53□□□□□ -0.24
Retrieved 100 of 98,524 protein–RNA pairs in 38.4 ms