Protein–RNA interactions for Protein: Q8N228

SCML4, Sex comb on midleg-like protein 4, humanhuman

Predictions only

Length 414 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCML4Q8N228 RANBP3-220ENST00000591092 1783 ntAPPRIS ALT2 TSL 1 (best) BASIC18.14■□□□□ 0.49
SCML4Q8N228 C16orf89-202ENST00000472572 1444 ntAPPRIS ALT2 TSL 1 (best) BASIC18.14■□□□□ 0.49
SCML4Q8N228 PTPA-206ENST00000358994 2664 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
SCML4Q8N228 PAQR4-202ENST00000318782 2793 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
SCML4Q8N228 FOXP1-210ENST00000484350 1996 ntTSL 2 BASIC18.13■□□□□ 0.49
SCML4Q8N228 SLC9A6-201ENST00000370695 4725 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
SCML4Q8N228 ZNF454-202ENST00000519564 2142 ntAPPRIS P1 TSL 2 BASIC18.13■□□□□ 0.49
SCML4Q8N228 AC116353.5-201ENST00000638148 1699 ntBASIC18.13■□□□□ 0.49
SCML4Q8N228 SH2B1-202ENST00000337120 6043 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
SCML4Q8N228 SUPT20H-202ENST00000356185 2681 ntAPPRIS P3 TSL 1 (best) BASIC18.13■□□□□ 0.49
SCML4Q8N228 AC003002.1-202ENST00000596755 1743 ntAPPRIS P1 BASIC18.13■□□□□ 0.49
SCML4Q8N228 PHF1-201ENST00000374512 2224 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
SCML4Q8N228 PLEKHB1-203ENST00000398492 2275 ntAPPRIS ALT1 TSL 1 (best) BASIC18.13■□□□□ 0.49
SCML4Q8N228 HBQ1-201ENST00000199708 536 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
SCML4Q8N228 TSPY2-201ENST00000320701 1161 ntAPPRIS P5 TSL 1 (best) BASIC18.13■□□□□ 0.49
SCML4Q8N228 GSTZ1-202ENST00000349555 867 ntTSL 2 BASIC18.13■□□□□ 0.49
SCML4Q8N228 SLC25A1P3-201ENST00000395415 828 ntBASIC18.13■□□□□ 0.49
SCML4Q8N228 ODF3B-205ENST00000428989 762 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
SCML4Q8N228 TSPY2-203ENST00000429039 779 ntAPPRIS ALT2 TSL 2 BASIC18.13■□□□□ 0.49
SCML4Q8N228 RMDN1-202ENST00000430676 1106 ntTSL 2 BASIC18.13■□□□□ 0.49
SCML4Q8N228 AL450267.1-201ENST00000557174 520 ntTSL 5 BASIC18.13■□□□□ 0.49
SCML4Q8N228 ZFPM1-204ENST00000563351 808 ntTSL 2 BASIC18.13■□□□□ 0.49
SCML4Q8N228 AL049840.3-201ENST00000602669 611 ntBASIC18.13■□□□□ 0.49
SCML4Q8N228 SCN5A-214ENST00000612060 714 ntTSL 5 BASIC18.13■□□□□ 0.49
SCML4Q8N228 PGM5P2-202ENST00000637225 1043 ntBASIC18.13■□□□□ 0.49
SCML4Q8N228 GGT5-201ENST00000263112 2334 ntAPPRIS ALT2 TSL 1 (best) BASIC18.13■□□□□ 0.49
SCML4Q8N228 QKI-201ENST00000275262 6964 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
SCML4Q8N228 PCBP4-203ENST00000428823 1835 ntTSL 5 BASIC18.13■□□□□ 0.49
SCML4Q8N228 ZCWPW1-202ENST00000398027 2356 ntAPPRIS P3 TSL 1 (best) BASIC18.13■□□□□ 0.49
SCML4Q8N228 CCDC120-206ENST00000603986 2379 ntAPPRIS ALT2 TSL 2 BASIC18.13■□□□□ 0.49
SCML4Q8N228 AL590787.1-201ENST00000568856 1315 ntBASIC18.13■□□□□ 0.49
SCML4Q8N228 RNF166-203ENST00000541206 2419 ntTSL 2 BASIC18.13■□□□□ 0.49
SCML4Q8N228 PDE4D-204ENST00000358923 2969 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
SCML4Q8N228 CHRNG-201ENST00000389492 1398 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
SCML4Q8N228 KRT85-202ENST00000544265 1387 ntTSL 2 BASIC18.13■□□□□ 0.49
SCML4Q8N228 AC018470.1-201ENST00000624790 3129 ntBASIC18.13■□□□□ 0.49
SCML4Q8N228 LMCD1-204ENST00000426878 1431 ntTSL 2 BASIC18.13■□□□□ 0.49
SCML4Q8N228 EIF3J-201ENST00000261868 2569 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
SCML4Q8N228 ZNF211-203ENST00000299871 2577 ntAPPRIS ALT2 TSL 3 BASIC18.13■□□□□ 0.49
SCML4Q8N228 ZNF74-202ENST00000400451 3159 ntAPPRIS P2 TSL 1 (best) BASIC18.13■□□□□ 0.49
SCML4Q8N228 CMPK2-201ENST00000256722 2884 ntAPPRIS P3 TSL 1 (best) BASIC18.13■□□□□ 0.49
SCML4Q8N228 ZNF419-201ENST00000221735 2309 ntAPPRIS ALT2 TSL 1 (best) BASIC18.12■□□□□ 0.49
SCML4Q8N228 RALGPS1-208ENST00000424082 2362 ntTSL 2 BASIC18.12■□□□□ 0.49
SCML4Q8N228 PCMTD1-206ENST00000521344 1712 ntTSL 3 BASIC18.12■□□□□ 0.49
SCML4Q8N228 ATP6AP2-224ENST00000637327 1929 ntAPPRIS ALT2 TSL 2 BASIC18.12■□□□□ 0.49
SCML4Q8N228 HINT1-201ENST00000304043 1081 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
SCML4Q8N228 CARMIL2-201ENST00000334583 4687 ntAPPRIS P3 TSL 1 (best) BASIC18.12■□□□□ 0.49
SCML4Q8N228 ITM2B-201ENST00000378549 805 ntTSL 5 BASIC18.12■□□□□ 0.49
SCML4Q8N228 SERF1B-202ENST00000380751 703 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
SCML4Q8N228 YDJC-202ENST00000398873 1066 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
SCML4Q8N228 AQP12A-202ENST00000429564 1110 ntAPPRIS P5 TSL 5 BASIC18.12■□□□□ 0.49
SCML4Q8N228 HFE-210ENST00000470149 1123 ntAPPRIS ALT2 TSL 1 (best) BASIC18.12■□□□□ 0.49
SCML4Q8N228 RPS29-206ENST00000557111 488 ntTSL 2 BASIC18.12■□□□□ 0.49
SCML4Q8N228 PRSS8-206ENST00000568261 1214 ntTSL 2 BASIC18.12■□□□□ 0.49
SCML4Q8N228 IER2-202ENST00000587885 1291 ntAPPRIS P1 TSL 3 BASIC18.12■□□□□ 0.49
SCML4Q8N228 KCNQ5-202ENST00000355194 6566 ntAPPRIS ALT1 TSL 5 BASIC18.12■□□□□ 0.49
SCML4Q8N228 KCNQ5-206ENST00000402622 6596 ntAPPRIS ALT2 TSL 5 BASIC18.12■□□□□ 0.49
SCML4Q8N228 QPRT-202ENST00000395384 2343 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
SCML4Q8N228 SKP2-201ENST00000274254 1537 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
SCML4Q8N228 ZNF22-201ENST00000298299 2551 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
SCML4Q8N228 ATP6V0E2-202ENST00000425642 1649 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
SCML4Q8N228 TMCO1-207ENST00000580248 1735 ntTSL 2 BASIC18.12■□□□□ 0.49
SCML4Q8N228 RUVBL1-201ENST00000322623 1761 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
SCML4Q8N228 TSPAN7-202ENST00000378482 1909 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
SCML4Q8N228 GNAZ-203ENST00000615612 3333 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
SCML4Q8N228 EVC-201ENST00000264956 6431 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
SCML4Q8N228 NARFL-218ENST00000568545 2486 ntTSL 2 BASIC18.11■□□□□ 0.49
SCML4Q8N228 APP-203ENST00000354192 3167 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
SCML4Q8N228 MYH14-208ENST00000598205 6137 ntAPPRIS P3 TSL 5 BASIC18.11■□□□□ 0.49
SCML4Q8N228 AC136632.2-201ENST00000512891 861 ntBASIC18.11■□□□□ 0.49
SCML4Q8N228 EEF1D-238ENST00000531621 840 ntTSL 3 BASIC18.11■□□□□ 0.49
SCML4Q8N228 DHRS4-205ENST00000558263 1089 ntTSL 5 BASIC18.11■□□□□ 0.49
SCML4Q8N228 DHRS4L2-207ENST00000558753 556 ntTSL 2 BASIC18.11■□□□□ 0.49
SCML4Q8N228 UBE2Q2P1-205ENST00000559871 534 ntTSL 5 BASIC18.11■□□□□ 0.49
SCML4Q8N228 AC009061.1-201ENST00000567261 475 ntTSL 3 BASIC18.11■□□□□ 0.49
SCML4Q8N228 LITAF-211ENST00000572255 516 ntTSL 4 BASIC18.11■□□□□ 0.49
SCML4Q8N228 LITAF-215ENST00000574763 717 ntAPPRIS P1 TSL 3 BASIC18.11■□□□□ 0.49
SCML4Q8N228 LINC01197-204ENST00000611265 956 ntTSL 5 BASIC18.11■□□□□ 0.49
SCML4Q8N228 AL805961.1-202ENST00000641562 540 ntBASIC18.11■□□□□ 0.49
SCML4Q8N228 PDCL3-201ENST00000264254 1337 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
SCML4Q8N228 IL2RG-202ENST00000374188 1432 ntTSL 5 BASIC18.11■□□□□ 0.49
SCML4Q8N228 AC068888.1-203ENST00000546566 1650 ntTSL 2 BASIC18.11■□□□□ 0.49
SCML4Q8N228 ISPD-201ENST00000399310 1709 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
SCML4Q8N228 ABCC3-202ENST00000427699 1881 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
SCML4Q8N228 CLDN7-203ENST00000538261 1923 ntTSL 5 BASIC18.11■□□□□ 0.49
SCML4Q8N228 TSNARE1-204ENST00000519651 2110 ntAPPRIS ALT2 TSL 1 (best) BASIC18.11■□□□□ 0.49
SCML4Q8N228 PPM1M-202ENST00000323588 2193 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
SCML4Q8N228 P2RY6-208ENST00000540124 2351 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
SCML4Q8N228 VPS13B-201ENST00000355155 2822 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
SCML4Q8N228 KCNC4-204ENST00000438661 2953 ntAPPRIS ALT2 TSL 1 (best) BASIC18.1■□□□□ 0.49
SCML4Q8N228 DVL2-209ENST00000575458 2659 ntAPPRIS ALT2 TSL 2 BASIC18.1■□□□□ 0.49
SCML4Q8N228 C19orf54-203ENST00000470681 2521 ntTSL 2 BASIC18.1■□□□□ 0.49
SCML4Q8N228 ZNF394-201ENST00000337673 2179 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
SCML4Q8N228 PPARD-202ENST00000337400 2041 ntTSL 5 BASIC18.1■□□□□ 0.49
SCML4Q8N228 CMTM3-214ENST00000567572 1934 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
SCML4Q8N228 SIL1-201ENST00000265195 1895 ntAPPRIS P1 TSL 5 BASIC18.1■□□□□ 0.49
SCML4Q8N228 GPBAR1-201ENST00000479077 1869 ntAPPRIS P1 TSL 2 BASIC18.1■□□□□ 0.49
SCML4Q8N228 AP005717.1-201ENST00000500705 1899 ntTSL 5 BASIC18.1■□□□□ 0.49
SCML4Q8N228 TFAP2D-201ENST00000008391 1711 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
SCML4Q8N228 OTUD5-204ENST00000428668 1493 ntTSL 2 BASIC18.1■□□□□ 0.49
Retrieved 100 of 98,524 protein–RNA pairs in 42.6 ms