Protein–RNA interactions for Protein: Q8IYR6

TMEFF1, Tomoregulin-1, humanhuman

Predictions only

Length 380 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMEFF1Q8IYR6 BX276092.7-203ENST00000637198 1536 ntBASIC17.32■□□□□ 0.36
TMEFF1Q8IYR6 BID-205ENST00000399774 2167 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
TMEFF1Q8IYR6 DTX3-204ENST00000548804 2067 ntAPPRIS P3 TSL 5 BASIC17.32■□□□□ 0.36
TMEFF1Q8IYR6 HDAC4-201ENST00000345617 8976 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
TMEFF1Q8IYR6 HDAC4-215ENST00000543185 8990 ntTSL 5 BASIC17.32■□□□□ 0.36
TMEFF1Q8IYR6 SLC22A11-202ENST00000377581 1975 ntTSL 5 BASIC17.32■□□□□ 0.36
TMEFF1Q8IYR6 LDHD-202ENST00000450168 1966 ntAPPRIS ALT2 TSL 1 (best) BASIC17.32■□□□□ 0.36
TMEFF1Q8IYR6 THUMPD2-204ENST00000505747 1970 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
TMEFF1Q8IYR6 SPNS1-204ENST00000352260 1948 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
TMEFF1Q8IYR6 C9orf116-202ENST00000371789 1278 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
TMEFF1Q8IYR6 DDT-204ENST00000404092 805 ntTSL 3 BASIC17.32■□□□□ 0.36
TMEFF1Q8IYR6 AP000695.1-201ENST00000429588 893 ntTSL 3 BASIC17.32■□□□□ 0.36
TMEFF1Q8IYR6 ACTG1P14-201ENST00000446382 1122 ntBASIC17.32■□□□□ 0.36
TMEFF1Q8IYR6 PTGES3-204ENST00000448157 1017 ntTSL 2 BASIC17.32■□□□□ 0.36
TMEFF1Q8IYR6 SEC24B-AS1-201ENST00000499359 957 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
TMEFF1Q8IYR6 SEC24B-AS1-204ENST00000510971 554 ntTSL 4 BASIC17.32■□□□□ 0.36
TMEFF1Q8IYR6 DDIAS-202ENST00000524921 607 ntAPPRIS ALT2 TSL 4 BASIC17.32■□□□□ 0.36
TMEFF1Q8IYR6 NDUFS7-216ENST00000546283 1060 ntTSL 2 BASIC17.32■□□□□ 0.36
TMEFF1Q8IYR6 KLK6-204ENST00000594641 842 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
TMEFF1Q8IYR6 TUBB4A-209ENST00000598006 565 ntTSL 2 BASIC17.32■□□□□ 0.36
TMEFF1Q8IYR6 SLC29A4-202ENST00000396872 5685 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
TMEFF1Q8IYR6 FGFR3-205ENST00000440486 4287 ntAPPRIS P3 TSL 5 BASIC17.32■□□□□ 0.36
TMEFF1Q8IYR6 TLE4-205ENST00000376544 4871 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
TMEFF1Q8IYR6 RNF146-203ENST00000368314 2369 ntAPPRIS ALT1 TSL 2 BASIC17.32■□□□□ 0.36
TMEFF1Q8IYR6 AC087500.1-202ENST00000571689 1715 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
TMEFF1Q8IYR6 PI4KAP1-204ENST00000612579 1703 ntBASIC17.32■□□□□ 0.36
TMEFF1Q8IYR6 MYO15B-232ENST00000610510 9195 ntAPPRIS P1 TSL 5 BASIC17.32■□□□□ 0.36
TMEFF1Q8IYR6 NSUN5-201ENST00000252594 1672 ntAPPRIS ALT2 TSL 1 (best) BASIC17.32■□□□□ 0.36
TMEFF1Q8IYR6 ACADVL-205ENST00000543245 2227 ntTSL 2 BASIC17.32■□□□□ 0.36
TMEFF1Q8IYR6 FBXO41-204ENST00000520530 3293 ntAPPRIS P1 TSL 5 BASIC17.32■□□□□ 0.36
TMEFF1Q8IYR6 CTSH-201ENST00000220166 2190 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
TMEFF1Q8IYR6 CYTH1-209ENST00000589296 2159 ntTSL 5 BASIC17.32■□□□□ 0.36
TMEFF1Q8IYR6 GHRHR-205ENST00000409904 1613 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
TMEFF1Q8IYR6 AC009336.1-201ENST00000608941 1553 ntBASIC17.32■□□□□ 0.36
TMEFF1Q8IYR6 CHAC1-204ENST00000617768 1560 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
TMEFF1Q8IYR6 CD248-201ENST00000311330 2558 ntAPPRIS P1 BASIC17.32■□□□□ 0.36
TMEFF1Q8IYR6 PKN1-201ENST00000242783 3069 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
TMEFF1Q8IYR6 MAPK8IP3-216ENST00000610761 5626 ntAPPRIS ALT1 TSL 1 (best) BASIC17.32■□□□□ 0.36
TMEFF1Q8IYR6 HAPLN3-204ENST00000562889 1547 ntTSL 5 BASIC17.31■□□□□ 0.36
TMEFF1Q8IYR6 RNF114-201ENST00000244061 2503 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
TMEFF1Q8IYR6 ACSM2A-201ENST00000219054 1988 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
TMEFF1Q8IYR6 NCCRP1-201ENST00000339852 1978 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
TMEFF1Q8IYR6 WDTC1-201ENST00000319394 4819 ntAPPRIS ALT1 TSL 1 (best) BASIC17.31■□□□□ 0.36
TMEFF1Q8IYR6 APCDD1-201ENST00000355285 3809 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
TMEFF1Q8IYR6 GRAMD2B-219ENST00000544396 2822 ntTSL 2 BASIC17.31■□□□□ 0.36
TMEFF1Q8IYR6 VMAC-201ENST00000339485 2254 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
TMEFF1Q8IYR6 WNK2-202ENST00000395477 6834 ntAPPRIS ALT2 TSL 5 BASIC17.31■□□□□ 0.36
TMEFF1Q8IYR6 RBM24-202ENST00000379052 2703 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
TMEFF1Q8IYR6 HACE1-202ENST00000369125 3102 ntTSL 2 BASIC17.31■□□□□ 0.36
TMEFF1Q8IYR6 MTMR12-201ENST00000264934 2215 ntTSL 2 BASIC17.31■□□□□ 0.36
TMEFF1Q8IYR6 GRB10-205ENST00000401949 2627 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
TMEFF1Q8IYR6 TTC19-201ENST00000261647 3002 ntAPPRIS P2 TSL 1 (best) BASIC17.31■□□□□ 0.36
TMEFF1Q8IYR6 PSRC1-203ENST00000369907 1717 ntAPPRIS P3 TSL 1 (best) BASIC17.31■□□□□ 0.36
TMEFF1Q8IYR6 PSRC1-206ENST00000409267 1730 ntAPPRIS P3 TSL 5 BASIC17.31■□□□□ 0.36
TMEFF1Q8IYR6 SLC9A6-201ENST00000370695 4725 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
TMEFF1Q8IYR6 KCNA3-201ENST00000369769 2569 ntAPPRIS P1 BASIC17.31■□□□□ 0.36
TMEFF1Q8IYR6 WIPF1-206ENST00000409891 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC17.31■□□□□ 0.36
TMEFF1Q8IYR6 KANK4-204ENST00000371153 4665 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
TMEFF1Q8IYR6 TCF20-203ENST00000404876 1058 ntTSL 3 BASIC17.31■□□□□ 0.36
TMEFF1Q8IYR6 NRSN2-AS1-202ENST00000442637 762 ntTSL 3 BASIC17.31■□□□□ 0.36
TMEFF1Q8IYR6 AL391069.3-201ENST00000455503 618 ntTSL 2 BASIC17.31■□□□□ 0.36
TMEFF1Q8IYR6 AC020659.2-201ENST00000510176 585 ntTSL 4 BASIC17.31■□□□□ 0.36
TMEFF1Q8IYR6 AC002398.2-201ENST00000587767 660 ntTSL 5 BASIC17.31■□□□□ 0.36
TMEFF1Q8IYR6 PRELID3A-208ENST00000590956 777 ntTSL 2 BASIC17.31■□□□□ 0.36
TMEFF1Q8IYR6 AC090164.3-201ENST00000610780 2143 ntBASIC17.31■□□□□ 0.36
TMEFF1Q8IYR6 RGS20-203ENST00000344277 1667 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
TMEFF1Q8IYR6 PXK-206ENST00000463280 2825 ntTSL 2 BASIC17.31■□□□□ 0.36
TMEFF1Q8IYR6 PPP1R7-201ENST00000234038 2386 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
TMEFF1Q8IYR6 HIBADH-201ENST00000265395 1990 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
TMEFF1Q8IYR6 ZSWIM4-201ENST00000254323 4339 ntAPPRIS P1 TSL 2 BASIC17.31■□□□□ 0.36
TMEFF1Q8IYR6 GMPPA-202ENST00000341142 1524 ntAPPRIS P1 TSL 5 BASIC17.31■□□□□ 0.36
TMEFF1Q8IYR6 PON1-201ENST00000222381 2568 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
TMEFF1Q8IYR6 GATM-201ENST00000396659 2597 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
TMEFF1Q8IYR6 ACVR1B-203ENST00000426655 1782 ntTSL 2 BASIC17.3■□□□□ 0.36
TMEFF1Q8IYR6 DAG1-221ENST00000541308 5676 ntAPPRIS P1 TSL 5 BASIC17.3■□□□□ 0.36
TMEFF1Q8IYR6 COPS7A-215ENST00000543155 2127 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
TMEFF1Q8IYR6 ARHGAP11A-208ENST00000567348 2422 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
TMEFF1Q8IYR6 POLR2C-201ENST00000219252 2057 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
TMEFF1Q8IYR6 TOM1L2-207ENST00000535933 1748 ntTSL 2 BASIC17.3■□□□□ 0.36
TMEFF1Q8IYR6 BEGAIN-202ENST00000443071 2744 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
TMEFF1Q8IYR6 ST3GAL3-206ENST00000351035 2377 ntTSL 5 BASIC17.3■□□□□ 0.36
TMEFF1Q8IYR6 GCAT-202ENST00000323205 1656 ntTSL 2 BASIC17.3■□□□□ 0.36
TMEFF1Q8IYR6 GNAS-AS1-202ENST00000443966 2341 ntTSL 5 BASIC17.3■□□□□ 0.36
TMEFF1Q8IYR6 OPCML-202ENST00000374778 1302 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
TMEFF1Q8IYR6 REM2-202ENST00000536884 1331 ntTSL 2 BASIC17.3■□□□□ 0.36
TMEFF1Q8IYR6 TIMM13-201ENST00000215570 1973 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
TMEFF1Q8IYR6 CCDC115-201ENST00000259229 1646 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
TMEFF1Q8IYR6 ARPC4-201ENST00000397261 2582 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
TMEFF1Q8IYR6 ZBTB8A-201ENST00000316459 1943 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
TMEFF1Q8IYR6 CIB3-201ENST00000269878 711 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
TMEFF1Q8IYR6 ZNF81-201ENST00000334937 610 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
TMEFF1Q8IYR6 BAX-203ENST00000354470 433 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
TMEFF1Q8IYR6 HHATL-AS1-201ENST00000423165 557 ntTSL 4 BASIC17.3■□□□□ 0.36
TMEFF1Q8IYR6 SLC25A36-204ENST00000453248 1040 ntTSL 2 BASIC17.3■□□□□ 0.36
TMEFF1Q8IYR6 AP000892.1-201ENST00000504906 488 ntTSL 3 BASIC17.3■□□□□ 0.36
TMEFF1Q8IYR6 SEC24B-AS1-203ENST00000505895 800 ntTSL 4 BASIC17.3■□□□□ 0.36
TMEFF1Q8IYR6 BRF1-219ENST00000551787 824 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
TMEFF1Q8IYR6 CYB561-216ENST00000582297 897 ntTSL 3 BASIC17.3■□□□□ 0.36
TMEFF1Q8IYR6 TK1-204ENST00000590430 683 ntTSL 3 BASIC17.3■□□□□ 0.36
TMEFF1Q8IYR6 AC004835.2-201ENST00000603762 682 ntBASIC17.3■□□□□ 0.36
Retrieved 100 of 98,524 protein–RNA pairs in 42.1 ms