Protein–RNA interactions for Protein: Q8IWT1

SCN4B, Sodium channel subunit beta-4, humanhuman

Predictions only

Length 228 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCN4BQ8IWT1 AC011530.1-201ENST00000593999 558 ntTSL 2 BASIC18.46■□□□□ 0.55
SCN4BQ8IWT1 REXO1L11P-201ENST00000620964 1927 ntBASIC18.46■□□□□ 0.55
SCN4BQ8IWT1 TLK2-202ENST00000343388 3227 ntAPPRIS ALT1 TSL 1 (best) BASIC18.46■□□□□ 0.55
SCN4BQ8IWT1 KIF1BP-204ENST00000626493 2337 ntTSL 5 BASIC18.46■□□□□ 0.55
SCN4BQ8IWT1 BTG3-202ENST00000348354 1456 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.54
SCN4BQ8IWT1 GPN3-202ENST00000537466 1491 ntTSL 1 (best) BASIC18.46■□□□□ 0.54
SCN4BQ8IWT1 NADK-201ENST00000341426 3235 ntAPPRIS P3 TSL 2 BASIC18.45■□□□□ 0.54
SCN4BQ8IWT1 ZNF131-206ENST00000505606 3209 ntAPPRIS P1 TSL 5 BASIC18.45■□□□□ 0.54
SCN4BQ8IWT1 TACC1-202ENST00000317827 7802 ntAPPRIS P3 TSL 1 (best) BASIC18.45■□□□□ 0.54
SCN4BQ8IWT1 PRR14-202ENST00000300835 2198 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
SCN4BQ8IWT1 TTC29-201ENST00000325106 1785 ntAPPRIS P3 TSL 1 (best) BASIC18.45■□□□□ 0.54
SCN4BQ8IWT1 TTC29-205ENST00000504425 1777 ntAPPRIS ALT2 TSL 5 BASIC18.45■□□□□ 0.54
SCN4BQ8IWT1 FBXW11-202ENST00000296933 4539 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
SCN4BQ8IWT1 EWSR1-207ENST00000406548 2207 ntAPPRIS ALT2 TSL 1 (best) BASIC18.45■□□□□ 0.54
SCN4BQ8IWT1 COQ9-201ENST00000262507 1677 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
SCN4BQ8IWT1 UQCRC1-201ENST00000203407 1985 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
SCN4BQ8IWT1 HDAC10-202ENST00000349505 1950 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
SCN4BQ8IWT1 ISCA2-201ENST00000298818 851 ntTSL 5 BASIC18.45■□□□□ 0.54
SCN4BQ8IWT1 DUSP12-201ENST00000367943 1270 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
SCN4BQ8IWT1 MYCLP1-201ENST00000372451 1075 ntBASIC18.45■□□□□ 0.54
SCN4BQ8IWT1 MSANTD3-201ENST00000374885 786 ntTSL 2 BASIC18.45■□□□□ 0.54
SCN4BQ8IWT1 HDAC11-202ENST00000402259 1000 ntTSL 3 BASIC18.45■□□□□ 0.54
SCN4BQ8IWT1 AL391650.1-205ENST00000433939 579 ntAPPRIS P1 TSL 3 BASIC18.45■□□□□ 0.54
SCN4BQ8IWT1 NDUFB2-208ENST00000471136 499 ntTSL 3 BASIC18.45■□□□□ 0.54
SCN4BQ8IWT1 HOXB-AS4-202ENST00000480386 566 ntTSL 4 BASIC18.45■□□□□ 0.54
SCN4BQ8IWT1 S100A2-206ENST00000497140 697 ntTSL 2 BASIC18.45■□□□□ 0.54
SCN4BQ8IWT1 RPL18-208ENST00000549920 1004 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
SCN4BQ8IWT1 RPL18-209ENST00000550645 463 ntTSL 5 BASIC18.45■□□□□ 0.54
SCN4BQ8IWT1 RPL18-214ENST00000552588 559 ntTSL 3 BASIC18.45■□□□□ 0.54
SCN4BQ8IWT1 NAA60-217ENST00000572942 1089 ntTSL 2 BASIC18.45■□□□□ 0.54
SCN4BQ8IWT1 CYGB-205ENST00000590175 830 ntTSL 3 BASIC18.45■□□□□ 0.54
SCN4BQ8IWT1 SLC26A1-205ENST00000622731 1057 ntTSL 5 BASIC18.45■□□□□ 0.54
SCN4BQ8IWT1 PSMA6-216ENST00000627895 484 ntTSL 5 BASIC18.45■□□□□ 0.54
SCN4BQ8IWT1 C16orf45-201ENST00000300006 2404 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
SCN4BQ8IWT1 KRT8-217ENST00000619952 2437 ntTSL 2 BASIC18.45■□□□□ 0.54
SCN4BQ8IWT1 KCNA3-201ENST00000369769 2569 ntAPPRIS P1 BASIC18.45■□□□□ 0.54
SCN4BQ8IWT1 PDE9A-203ENST00000335440 1728 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
SCN4BQ8IWT1 TEF-201ENST00000266304 4394 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
SCN4BQ8IWT1 CACTIN-201ENST00000221899 2797 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
SCN4BQ8IWT1 KANK3-201ENST00000330915 2787 ntAPPRIS P2 TSL 1 (best) BASIC18.45■□□□□ 0.54
SCN4BQ8IWT1 FIP1L1-207ENST00000507922 1335 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
SCN4BQ8IWT1 LHX8-201ENST00000294638 2373 ntAPPRIS P3 TSL 1 (best) BASIC18.45■□□□□ 0.54
SCN4BQ8IWT1 FKBP10-201ENST00000321562 2662 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
SCN4BQ8IWT1 GRIN3B-201ENST00000234389 3281 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
SCN4BQ8IWT1 ZNRF2-201ENST00000323037 3460 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
SCN4BQ8IWT1 NPR3-204ENST00000434067 2715 ntTSL 5 BASIC18.44■□□□□ 0.54
SCN4BQ8IWT1 AC118553.2-203ENST00000639037 2590 ntAPPRIS P5 TSL 5 BASIC18.44■□□□□ 0.54
SCN4BQ8IWT1 NME9-203ENST00000383180 2133 ntTSL 2 BASIC18.44■□□□□ 0.54
SCN4BQ8IWT1 SEMA6C-209ENST00000613223 1950 ntTSL 5 BASIC18.44■□□□□ 0.54
SCN4BQ8IWT1 SGSM2-201ENST00000268989 4863 ntAPPRIS P3 TSL 1 (best) BASIC18.44■□□□□ 0.54
SCN4BQ8IWT1 LINC02381-201ENST00000508564 1369 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
SCN4BQ8IWT1 ILF3-203ENST00000449870 6119 ntAPPRIS ALT2 TSL 1 (best) BASIC18.44■□□□□ 0.54
SCN4BQ8IWT1 BEGAIN-211ENST00000637646 2911 ntTSL 5 BASIC18.44■□□□□ 0.54
SCN4BQ8IWT1 PTPRF-209ENST00000438120 6377 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
SCN4BQ8IWT1 CDC14B-203ENST00000375242 2965 ntTSL 2 BASIC18.44■□□□□ 0.54
SCN4BQ8IWT1 MECP2-205ENST00000453960 1729 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
SCN4BQ8IWT1 AC009336.1-201ENST00000608941 1553 ntBASIC18.44■□□□□ 0.54
SCN4BQ8IWT1 ACTRT2-201ENST00000378404 1421 ntAPPRIS P1 BASIC18.44■□□□□ 0.54
SCN4BQ8IWT1 DHDH-201ENST00000221403 1081 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
SCN4BQ8IWT1 AL512785.2-202ENST00000367932 830 ntTSL 4 BASIC18.44■□□□□ 0.54
SCN4BQ8IWT1 TRIM36-203ENST00000379618 693 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
SCN4BQ8IWT1 MIR940-201ENST00000401276 94 ntBASIC18.44■□□□□ 0.54
SCN4BQ8IWT1 AC134772.1-202ENST00000435578 549 ntTSL 4 BASIC18.44■□□□□ 0.54
SCN4BQ8IWT1 AC078883.2-201ENST00000441212 558 ntTSL 3 BASIC18.44■□□□□ 0.54
SCN4BQ8IWT1 SEC23A-206ENST00000553970 574 ntTSL 4 BASIC18.44■□□□□ 0.54
SCN4BQ8IWT1 AC006557.2-201ENST00000592985 1240 ntBASIC18.44■□□□□ 0.54
SCN4BQ8IWT1 FAM71E1-202ENST00000595790 1225 ntAPPRIS P3 TSL 1 (best) BASIC18.44■□□□□ 0.54
SCN4BQ8IWT1 MIR1199-201ENST00000621445 119 ntBASIC18.44■□□□□ 0.54
SCN4BQ8IWT1 NPEPL1-204ENST00000525967 1917 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
SCN4BQ8IWT1 AP5B1-201ENST00000532090 4811 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
SCN4BQ8IWT1 ELN-202ENST00000320399 2274 ntAPPRIS ALT2 TSL 5 BASIC18.44■□□□□ 0.54
SCN4BQ8IWT1 PARD3-205ENST00000374773 3420 ntTSL 5 BASIC18.44■□□□□ 0.54
SCN4BQ8IWT1 FOXP3-201ENST00000376197 1326 ntTSL 2 BASIC18.44■□□□□ 0.54
SCN4BQ8IWT1 ZNF346-208ENST00000511834 2306 ntTSL 5 BASIC18.44■□□□□ 0.54
SCN4BQ8IWT1 GUCY1A2-201ENST00000282249 3047 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
SCN4BQ8IWT1 CXADR-201ENST00000284878 6254 ntAPPRIS P3 TSL 1 (best) BASIC18.44■□□□□ 0.54
SCN4BQ8IWT1 FBXO41-204ENST00000520530 3293 ntAPPRIS P1 TSL 5 BASIC18.43■□□□□ 0.54
SCN4BQ8IWT1 LUC7L-202ENST00000337351 2097 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
SCN4BQ8IWT1 TGDS-201ENST00000261296 1905 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
SCN4BQ8IWT1 SYTL3-201ENST00000297239 2292 ntAPPRIS ALT1 TSL 1 (best) BASIC18.43■□□□□ 0.54
SCN4BQ8IWT1 RNF121-201ENST00000361756 2625 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
SCN4BQ8IWT1 ADGRB2-201ENST00000373655 5400 ntAPPRIS P4 TSL 1 (best) BASIC18.43■□□□□ 0.54
SCN4BQ8IWT1 TRPV4-208ENST00000544971 2295 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
SCN4BQ8IWT1 SMG5-201ENST00000361813 4559 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
SCN4BQ8IWT1 AC104109.2-201ENST00000602919 1418 ntBASIC18.43■□□□□ 0.54
SCN4BQ8IWT1 RCAN3-209ENST00000616511 2527 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
SCN4BQ8IWT1 CTSG-201ENST00000216336 886 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
SCN4BQ8IWT1 PIH1D1-201ENST00000262265 1192 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
SCN4BQ8IWT1 TM2D1-201ENST00000294613 1250 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
SCN4BQ8IWT1 GUK1-202ENST00000366716 940 ntAPPRIS P3 TSL 1 (best) BASIC18.43■□□□□ 0.54
SCN4BQ8IWT1 ADIPOR1-202ENST00000367254 1116 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
SCN4BQ8IWT1 TM2D1-204ENST00000371180 1248 ntTSL 5 BASIC18.43■□□□□ 0.54
SCN4BQ8IWT1 PFDN6-201ENST00000374606 740 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
SCN4BQ8IWT1 AL359915.2-201ENST00000425884 745 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
SCN4BQ8IWT1 HCG15-203ENST00000438190 1032 ntTSL 3 BASIC18.43■□□□□ 0.54
SCN4BQ8IWT1 TSPY3-202ENST00000440483 414 ntTSL 5 BASIC18.43■□□□□ 0.54
SCN4BQ8IWT1 IGHV3-22-201ENST00000520721 359 ntBASIC18.43■□□□□ 0.54
SCN4BQ8IWT1 RPS29-206ENST00000557111 488 ntTSL 2 BASIC18.43■□□□□ 0.54
SCN4BQ8IWT1 AC106730.1-201ENST00000566722 1090 ntBASIC18.43■□□□□ 0.54
SCN4BQ8IWT1 TM2D1-212ENST00000606498 969 ntAPPRIS P1 TSL 5 BASIC18.43■□□□□ 0.54
Retrieved 100 of 98,524 protein–RNA pairs in 49.2 ms