Protein–RNA interactions for Protein: Q8IVE0

CROCCP3, Putative ciliary rootlet coiled-coil protein-like 2 protein, humanhuman

Predictions only

Length 287 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CROCCP3Q8IVE0 LRRC38-201ENST00000376085 2209 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
CROCCP3Q8IVE0 POMT1-205ENST00000404875 2821 ntTSL 2 BASIC15.9■□□□□ 0.14
CROCCP3Q8IVE0 MTCL1-203ENST00000400050 6042 ntAPPRIS P2 TSL 5 BASIC15.89■□□□□ 0.14
CROCCP3Q8IVE0 IL12RB2-206ENST00000544434 3782 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
CROCCP3Q8IVE0 PICALM-219ENST00000532317 3474 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
CROCCP3Q8IVE0 AC005064.1-201ENST00000422488 2725 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
CROCCP3Q8IVE0 SCOC-211ENST00000614192 1959 ntAPPRIS P2 TSL 1 (best) BASIC15.89■□□□□ 0.13
CROCCP3Q8IVE0 ZNF276-201ENST00000289816 4589 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
CROCCP3Q8IVE0 AC021683.3-202ENST00000592572 4440 ntTSL 5 BASIC15.89■□□□□ 0.13
CROCCP3Q8IVE0 PYURF-201ENST00000273968 1361 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
CROCCP3Q8IVE0 LGALS9-202ENST00000313648 1378 ntTSL 3 BASIC15.89■□□□□ 0.13
CROCCP3Q8IVE0 SLK-201ENST00000335753 7673 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
CROCCP3Q8IVE0 SOWAHA-201ENST00000378693 3211 ntAPPRIS P1 BASIC15.89■□□□□ 0.13
CROCCP3Q8IVE0 SLC22A23-210ENST00000490273 2043 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
CROCCP3Q8IVE0 SMARCA4-203ENST00000429416 5691 ntTSL 2 BASIC15.89■□□□□ 0.13
CROCCP3Q8IVE0 C14orf79-205ENST00000549240 2503 ntAPPRIS ALT2 TSL 2 BASIC15.89■□□□□ 0.13
CROCCP3Q8IVE0 SAP130-201ENST00000259234 4140 ntAPPRIS P1 TSL 5 BASIC15.89■□□□□ 0.13
CROCCP3Q8IVE0 CD70-201ENST00000245903 913 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
CROCCP3Q8IVE0 PTPA-216ENST00000432651 857 ntTSL 2 BASIC15.89■□□□□ 0.13
CROCCP3Q8IVE0 RNF135-204ENST00000443677 1261 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
CROCCP3Q8IVE0 GATS-209ENST00000454084 1030 ntTSL 3 BASIC15.89■□□□□ 0.13
CROCCP3Q8IVE0 AL359182.2-201ENST00000457720 606 ntTSL 3 BASIC15.89■□□□□ 0.13
CROCCP3Q8IVE0 ALKBH6-212ENST00000485128 959 ntTSL 5 BASIC15.89■□□□□ 0.13
CROCCP3Q8IVE0 MFSD14C-203ENST00000602917 786 ntAPPRIS P5 TSL 1 (best) BASIC15.89■□□□□ 0.13
CROCCP3Q8IVE0 ZNF385A-203ENST00000394313 2430 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
CROCCP3Q8IVE0 CXXC1-202ENST00000412036 2280 ntAPPRIS ALT1 TSL 1 (best) BASIC15.89■□□□□ 0.13
CROCCP3Q8IVE0 KCNC1-202ENST00000379472 7965 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
CROCCP3Q8IVE0 KCTD11-201ENST00000333751 2783 ntAPPRIS P1 BASIC15.89■□□□□ 0.13
CROCCP3Q8IVE0 AL445931.1-201ENST00000412181 2112 ntTSL 2 BASIC15.89■□□□□ 0.13
CROCCP3Q8IVE0 PTGER3-203ENST00000354608 1470 ntAPPRIS ALT2 TSL 5 BASIC15.89■□□□□ 0.13
CROCCP3Q8IVE0 NBPF21P-201ENST00000425093 1451 ntBASIC15.89■□□□□ 0.13
CROCCP3Q8IVE0 PCBP4-201ENST00000322099 1964 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
CROCCP3Q8IVE0 GPR42-201ENST00000454971 1804 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
CROCCP3Q8IVE0 ELP5-202ENST00000356683 2197 ntTSL 5 BASIC15.89■□□□□ 0.13
CROCCP3Q8IVE0 GBA2-201ENST00000378088 1672 ntTSL 2 BASIC15.89■□□□□ 0.13
CROCCP3Q8IVE0 ITGB1BP1-204ENST00000360635 4859 ntAPPRIS P1 TSL 5 BASIC15.89■□□□□ 0.13
CROCCP3Q8IVE0 CACNA1G-201ENST00000352832 7848 ntAPPRIS ALT2 TSL 1 (best) BASIC15.89■□□□□ 0.13
CROCCP3Q8IVE0 CEMP1-202ENST00000567119 1374 ntAPPRIS P2 BASIC15.88■□□□□ 0.13
CROCCP3Q8IVE0 TTBK2-208ENST00000622375 6891 ntAPPRIS ALT2 TSL 1 (best) BASIC15.88■□□□□ 0.13
CROCCP3Q8IVE0 IER2-203ENST00000588173 2934 ntAPPRIS P1 BASIC15.88■□□□□ 0.13
CROCCP3Q8IVE0 ISM2-207ENST00000493585 1739 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
CROCCP3Q8IVE0 PRPS1-204ENST00000372435 2073 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
CROCCP3Q8IVE0 TMED7-TICAM2-201ENST00000282382 3491 ntAPPRIS P1 TSL 2 BASIC15.88■□□□□ 0.13
CROCCP3Q8IVE0 UBE3D-203ENST00000369747 1917 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
CROCCP3Q8IVE0 DCLK2-204ENST00000506325 2298 ntAPPRIS ALT2 TSL 5 BASIC15.88■□□□□ 0.13
CROCCP3Q8IVE0 SEC14L4-201ENST00000255858 2499 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
CROCCP3Q8IVE0 FERMT3-201ENST00000279227 2489 ntAPPRIS P4 TSL 1 (best) BASIC15.88■□□□□ 0.13
CROCCP3Q8IVE0 FERMT3-202ENST00000345728 2481 ntAPPRIS ALT1 TSL 1 (best) BASIC15.88■□□□□ 0.13
CROCCP3Q8IVE0 SERINC2-202ENST00000373710 2146 ntTSL 2 BASIC15.88■□□□□ 0.13
CROCCP3Q8IVE0 GHDC-201ENST00000301671 2650 ntAPPRIS P1 TSL 2 BASIC15.88■□□□□ 0.13
CROCCP3Q8IVE0 INA-201ENST00000369849 3231 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
CROCCP3Q8IVE0 SLAIN2-201ENST00000264313 6299 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
CROCCP3Q8IVE0 CDC42EP5-201ENST00000301200 864 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
CROCCP3Q8IVE0 HCFC1R1-202ENST00000354679 765 ntTSL 2 BASIC15.88■□□□□ 0.13
CROCCP3Q8IVE0 PMEPA1-204ENST00000395814 800 ntTSL 3 BASIC15.88■□□□□ 0.13
CROCCP3Q8IVE0 MIPEPP3-201ENST00000412105 444 ntBASIC15.88■□□□□ 0.13
CROCCP3Q8IVE0 A3GALT2-201ENST00000442999 1023 ntAPPRIS P1 TSL 5 BASIC15.88■□□□□ 0.13
CROCCP3Q8IVE0 FEZ1-205ENST00000524435 750 ntTSL 2 BASIC15.88■□□□□ 0.13
CROCCP3Q8IVE0 AP001363.2-201ENST00000538101 391 ntTSL 3 BASIC15.88■□□□□ 0.13
CROCCP3Q8IVE0 MIR6821-201ENST00000617625 74 ntBASIC15.88■□□□□ 0.13
CROCCP3Q8IVE0 ADORA1-208ENST00000618295 862 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
CROCCP3Q8IVE0 DPY19L2P4-202ENST00000497063 2018 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
CROCCP3Q8IVE0 SLC39A6-202ENST00000440549 1657 ntAPPRIS ALT2 TSL 1 (best) BASIC15.88■□□□□ 0.13
CROCCP3Q8IVE0 WASHC2C-202ENST00000359860 4471 ntAPPRIS ALT2 TSL 5 BASIC15.88■□□□□ 0.13
CROCCP3Q8IVE0 SULT1C4-201ENST00000272452 1860 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
CROCCP3Q8IVE0 CNTNAP3-202ENST00000358144 4885 ntTSL 5 BASIC15.88■□□□□ 0.13
CROCCP3Q8IVE0 CCDC43-202ENST00000457422 2058 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
CROCCP3Q8IVE0 ESPN-202ENST00000416731 1338 ntTSL 5 BASIC15.88■□□□□ 0.13
CROCCP3Q8IVE0 MIRLET7BHG-203ENST00000435439 2264 ntTSL 2 BASIC15.88■□□□□ 0.13
CROCCP3Q8IVE0 NIFK-201ENST00000285814 1734 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
CROCCP3Q8IVE0 MITF-204ENST00000352241 4814 ntAPPRIS ALT1 TSL 1 (best) BASIC15.88■□□□□ 0.13
CROCCP3Q8IVE0 POM121C-206ENST00000607367 3690 ntAPPRIS ALT2 TSL 5 BASIC15.88■□□□□ 0.13
CROCCP3Q8IVE0 AL009178.2-201ENST00000597278 2719 ntBASIC15.88■□□□□ 0.13
CROCCP3Q8IVE0 GRIK5-204ENST00000593562 3308 ntAPPRIS P1 TSL 5 BASIC15.88■□□□□ 0.13
CROCCP3Q8IVE0 AC012313.3-202ENST00000599109 3322 ntTSL 5 BASIC15.88■□□□□ 0.13
CROCCP3Q8IVE0 ASNS-201ENST00000175506 2356 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
CROCCP3Q8IVE0 ITGBL1-207ENST00000622834 2369 ntTSL 5 BASIC15.87■□□□□ 0.13
CROCCP3Q8IVE0 NLE1-202ENST00000442241 2588 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
CROCCP3Q8IVE0 SYT6-201ENST00000369547 4369 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
CROCCP3Q8IVE0 TBC1D25-201ENST00000376771 4042 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
CROCCP3Q8IVE0 AAK1-202ENST00000409068 2606 ntTSL 2 BASIC15.87■□□□□ 0.13
CROCCP3Q8IVE0 THAP8-201ENST00000292894 1825 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
CROCCP3Q8IVE0 HLA-J-201ENST00000462773 1622 ntBASIC15.87■□□□□ 0.13
CROCCP3Q8IVE0 PPP2R5D-202ENST00000394110 2894 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
CROCCP3Q8IVE0 SCAMP2-201ENST00000268099 2453 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
CROCCP3Q8IVE0 HGNC:24955-201ENST00000303177 2452 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
CROCCP3Q8IVE0 SPOCK2-202ENST00000373109 5445 ntAPPRIS P2 TSL 1 (best) BASIC15.87■□□□□ 0.13
CROCCP3Q8IVE0 AP001781.3-201ENST00000622211 2939 ntAPPRIS P1 TSL 2 BASIC15.87■□□□□ 0.13
CROCCP3Q8IVE0 INF2-204ENST00000398337 1689 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
CROCCP3Q8IVE0 CDKN2AIP-203ENST00000504169 2721 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
CROCCP3Q8IVE0 AC097376.2-201ENST00000608661 2510 ntTSL 5 BASIC15.87■□□□□ 0.13
CROCCP3Q8IVE0 ZNF580-201ENST00000325333 1261 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
CROCCP3Q8IVE0 METTL23-201ENST00000341249 1155 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
CROCCP3Q8IVE0 MRPS26-201ENST00000380325 1127 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
CROCCP3Q8IVE0 DHRS4-206ENST00000558581 1143 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
CROCCP3Q8IVE0 AC012313.6-201ENST00000599889 790 ntTSL 3 BASIC15.87■□□□□ 0.13
CROCCP3Q8IVE0 LAT2-202ENST00000344995 2363 ntAPPRIS P2 TSL 1 (best) BASIC15.87■□□□□ 0.13
CROCCP3Q8IVE0 ALG3-201ENST00000397676 1528 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
CROCCP3Q8IVE0 KCNQ2-204ENST00000359125 3253 ntAPPRIS P4 TSL 1 (best) BASIC15.87■□□□□ 0.13
CROCCP3Q8IVE0 RGL2-247ENST00000497454 3278 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
Retrieved 100 of 98,524 protein–RNA pairs in 58.2 ms