Protein–RNA interactions for Protein: Q71DI3

HIST2H3A, Histone H3.2, humanhuman

Predictions only

Length 136 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HIST2H3AQ71DI3 Metazoa_SRP.104-201ENST00000622099 280 ntBASIC15.39■□□□□ 0.05
HIST2H3AQ71DI3 LRRC23-215ENST00000622489 1061 ntTSL 5 BASIC15.39■□□□□ 0.05
HIST2H3AQ71DI3 ALDH3B1-204ENST00000614849 2280 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
HIST2H3AQ71DI3 AC009779.2-201ENST00000552576 1443 ntTSL 4 BASIC15.39■□□□□ 0.05
HIST2H3AQ71DI3 ECSIT-202ENST00000270517 1700 ntAPPRIS P3 TSL 1 (best) BASIC15.39■□□□□ 0.05
HIST2H3AQ71DI3 ISYNA1-202ENST00000457269 1703 ntTSL 2 BASIC15.39■□□□□ 0.05
HIST2H3AQ71DI3 SNX16-201ENST00000345957 1853 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
HIST2H3AQ71DI3 MFSD2A-202ENST00000372811 2154 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
HIST2H3AQ71DI3 GPR149-201ENST00000389740 2323 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
HIST2H3AQ71DI3 CDK11B-201ENST00000340677 2534 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
HIST2H3AQ71DI3 SPATA18-202ENST00000419395 2816 ntTSL 2 BASIC15.39■□□□□ 0.05
HIST2H3AQ71DI3 PLPPR4-202ENST00000370185 5369 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
HIST2H3AQ71DI3 RABEP1-202ENST00000537505 5365 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
HIST2H3AQ71DI3 AMT-250ENST00000637682 1823 ntTSL 5 BASIC15.38■□□□□ 0.05
HIST2H3AQ71DI3 RAB22A-201ENST00000244040 8670 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
HIST2H3AQ71DI3 IER3-202ENST00000376377 1350 ntBASIC15.38■□□□□ 0.05
HIST2H3AQ71DI3 KLHL22-201ENST00000328879 2616 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
HIST2H3AQ71DI3 SPAG6-203ENST00000376624 2605 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
HIST2H3AQ71DI3 TAF1C-222ENST00000570117 2349 ntAPPRIS ALT2 TSL 2 BASIC15.38■□□□□ 0.05
HIST2H3AQ71DI3 PACS1-201ENST00000320580 4392 ntAPPRIS P2 TSL 1 (best) BASIC15.38■□□□□ 0.05
HIST2H3AQ71DI3 SEPT11-209ENST00000510515 1886 ntTSL 2 BASIC15.38■□□□□ 0.05
HIST2H3AQ71DI3 MSL1-206ENST00000579565 1401 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
HIST2H3AQ71DI3 HFE2-201ENST00000336751 2234 ntAPPRIS P1 TSL 2 BASIC15.38■□□□□ 0.05
HIST2H3AQ71DI3 PFN1-201ENST00000225655 1291 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
HIST2H3AQ71DI3 KHDC1-201ENST00000257765 1134 ntAPPRIS P3 TSL 1 (best) BASIC15.38■□□□□ 0.05
HIST2H3AQ71DI3 ISCA1-202ENST00000326094 1264 ntTSL 3 BASIC15.38■□□□□ 0.05
HIST2H3AQ71DI3 MYCLP1-201ENST00000372451 1075 ntBASIC15.38■□□□□ 0.05
HIST2H3AQ71DI3 C6orf48-204ENST00000375639 712 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
HIST2H3AQ71DI3 PDLIM7-205ENST00000393551 1226 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
HIST2H3AQ71DI3 FAM220CP-201ENST00000395253 831 ntBASIC15.38■□□□□ 0.05
HIST2H3AQ71DI3 ATP5J-203ENST00000400090 647 ntAPPRIS P1 TSL 2 BASIC15.38■□□□□ 0.05
HIST2H3AQ71DI3 AC103564.2-201ENST00000432853 1299 ntBASIC15.38■□□□□ 0.05
HIST2H3AQ71DI3 CATIP-AS1-202ENST00000441749 480 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
HIST2H3AQ71DI3 AP002383.4-201ENST00000442518 975 ntBASIC15.38■□□□□ 0.05
HIST2H3AQ71DI3 DANCR-204ENST00000444958 709 ntTSL 3 BASIC15.38■□□□□ 0.05
HIST2H3AQ71DI3 SMIM4-202ENST00000476842 522 ntTSL 4 BASIC15.38■□□□□ 0.05
HIST2H3AQ71DI3 RNASEH2C-202ENST00000527610 835 ntTSL 2 BASIC15.38■□□□□ 0.05
HIST2H3AQ71DI3 AC009533.2-201ENST00000543664 586 ntBASIC15.38■□□□□ 0.05
HIST2H3AQ71DI3 AC004801.5-202ENST00000546804 530 ntTSL 4 BASIC15.38■□□□□ 0.05
HIST2H3AQ71DI3 ATP6V0C-203ENST00000565223 668 ntTSL 3 BASIC15.38■□□□□ 0.05
HIST2H3AQ71DI3 ATP6V0C-204ENST00000568562 477 ntTSL 3 BASIC15.38■□□□□ 0.05
HIST2H3AQ71DI3 SHBG-211ENST00000574539 938 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
HIST2H3AQ71DI3 AP005901.3-202ENST00000581653 237 ntBASIC15.38■□□□□ 0.05
HIST2H3AQ71DI3 AC016582.2-201ENST00000591908 446 ntTSL 3 BASIC15.38■□□□□ 0.05
HIST2H3AQ71DI3 KHDC1-207ENST00000610435 1101 ntAPPRIS P3 TSL 5 BASIC15.38■□□□□ 0.05
HIST2H3AQ71DI3 C9orf64-203ENST00000376344 2443 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
HIST2H3AQ71DI3 LAT-203ENST00000395456 1616 ntAPPRIS ALT2 TSL 1 (best) BASIC15.38■□□□□ 0.05
HIST2H3AQ71DI3 EML2-203ENST00000536630 2791 ntAPPRIS ALT2 TSL 2 BASIC15.38■□□□□ 0.05
HIST2H3AQ71DI3 WDR88-202ENST00000361680 1835 ntAPPRIS ALT2 TSL 1 (best) BASIC15.38■□□□□ 0.05
HIST2H3AQ71DI3 CAMK2D-201ENST00000296402 5820 ntAPPRIS P3 TSL 5 BASIC15.38■□□□□ 0.05
HIST2H3AQ71DI3 CAP2-208ENST00000611958 2686 ntTSL 2 BASIC15.38■□□□□ 0.05
HIST2H3AQ71DI3 PPIF-201ENST00000225174 2190 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
HIST2H3AQ71DI3 TFAP2E-201ENST00000373235 2189 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
HIST2H3AQ71DI3 SLC22A1-201ENST00000324965 1521 ntTSL 5 BASIC15.38■□□□□ 0.05
HIST2H3AQ71DI3 OSGIN1-202ENST00000361711 2230 ntAPPRIS P1 TSL 2 BASIC15.37■□□□□ 0.05
HIST2H3AQ71DI3 PARD3-205ENST00000374773 3420 ntTSL 5 BASIC15.37■□□□□ 0.05
HIST2H3AQ71DI3 ANAPC11-211ENST00000575195 1361 ntAPPRIS P1 TSL 2 BASIC15.37■□□□□ 0.05
HIST2H3AQ71DI3 OPRK1-205ENST00000612786 5196 ntTSL 1 (best) BASIC15.37■□□□□ 0.05
HIST2H3AQ71DI3 AL049757.1-201ENST00000616842 1596 ntBASIC15.37■□□□□ 0.05
HIST2H3AQ71DI3 ARHGAP6-202ENST00000337414 5117 ntAPPRIS P4 TSL 1 (best) BASIC15.37■□□□□ 0.05
HIST2H3AQ71DI3 PRKCD-201ENST00000330452 2680 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
HIST2H3AQ71DI3 GGT5-201ENST00000263112 2334 ntAPPRIS ALT2 TSL 1 (best) BASIC15.37■□□□□ 0.05
HIST2H3AQ71DI3 HOOK2-202ENST00000397668 2513 ntTSL 1 (best) BASIC15.37■□□□□ 0.05
HIST2H3AQ71DI3 ERBB2-205ENST00000578199 2526 ntTSL 1 (best) BASIC15.37■□□□□ 0.05
HIST2H3AQ71DI3 HPDL-201ENST00000334815 1629 ntAPPRIS P1 BASIC15.37■□□□□ 0.05
HIST2H3AQ71DI3 SLC27A2-202ENST00000380902 2181 ntTSL 1 (best) BASIC15.37■□□□□ 0.05
HIST2H3AQ71DI3 MOS-201ENST00000311923 1041 ntAPPRIS P1 BASIC15.37■□□□□ 0.05
HIST2H3AQ71DI3 PPIH-202ENST00000372549 327 ntTSL 3 BASIC15.37■□□□□ 0.05
HIST2H3AQ71DI3 RPS9-203ENST00000391752 772 ntAPPRIS P1 TSL 2 BASIC15.37■□□□□ 0.05
HIST2H3AQ71DI3 KLK14-202ENST00000391802 1133 ntAPPRIS P1 TSL 5 BASIC15.37■□□□□ 0.05
HIST2H3AQ71DI3 ING5-202ENST00000406941 946 ntAPPRIS ALT1 TSL 1 (best) BASIC15.37■□□□□ 0.05
HIST2H3AQ71DI3 RPS14-203ENST00000407193 784 ntAPPRIS P1 TSL 2 BASIC15.37■□□□□ 0.05
HIST2H3AQ71DI3 C2orf82-202ENST00000409230 663 ntAPPRIS P2 TSL 3 BASIC15.37■□□□□ 0.05
HIST2H3AQ71DI3 MAGI2-AS3-203ENST00000424477 520 ntTSL 4 BASIC15.37■□□□□ 0.05
HIST2H3AQ71DI3 VENTXP7-201ENST00000475503 772 ntBASIC15.37■□□□□ 0.05
HIST2H3AQ71DI3 AC079848.1-202ENST00000507924 444 ntTSL 3 BASIC15.37■□□□□ 0.05
HIST2H3AQ71DI3 RBPMS-AS1-202ENST00000519753 1031 ntTSL 5 BASIC15.37■□□□□ 0.05
HIST2H3AQ71DI3 TPSP2-201ENST00000561760 610 ntBASIC15.37■□□□□ 0.05
HIST2H3AQ71DI3 AC027682.5-201ENST00000567122 530 ntTSL 3 BASIC15.37■□□□□ 0.05
HIST2H3AQ71DI3 AC008687.7-201ENST00000593309 920 ntTSL 1 (best) BASIC15.37■□□□□ 0.05
HIST2H3AQ71DI3 GNAS-AS1-203ENST00000598163 548 ntTSL 4 BASIC15.37■□□□□ 0.05
HIST2H3AQ71DI3 SPACA6-213ENST00000637797 1073 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
HIST2H3AQ71DI3 AP000550.4-202ENST00000639755 178 ntBASIC15.37■□□□□ 0.05
HIST2H3AQ71DI3 SUSD4-208ENST00000494793 1833 ntTSL 5 BASIC15.37■□□□□ 0.05
HIST2H3AQ71DI3 CYP2W1-202ENST00000340150 2361 ntTSL 2 BASIC15.37■□□□□ 0.05
HIST2H3AQ71DI3 FOXE1-201ENST00000375123 3462 ntAPPRIS P1 BASIC15.37■□□□□ 0.05
HIST2H3AQ71DI3 RAB33B-201ENST00000305626 4562 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
HIST2H3AQ71DI3 ARHGAP11A-201ENST00000361627 5898 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
HIST2H3AQ71DI3 PDLIM2-206ENST00000409141 1463 ntTSL 2 BASIC15.37■□□□□ 0.05
HIST2H3AQ71DI3 PLCG1-AS1-201ENST00000454626 1462 ntTSL 1 (best) BASIC15.37■□□□□ 0.05
HIST2H3AQ71DI3 NFATC4-223ENST00000555802 1476 ntTSL 1 (best) BASIC15.37■□□□□ 0.05
HIST2H3AQ71DI3 AC105411.1-202ENST00000565050 1476 ntTSL 5 BASIC15.37■□□□□ 0.05
HIST2H3AQ71DI3 CARD10-202ENST00000403299 4113 ntAPPRIS P1 TSL 5 BASIC15.37■□□□□ 0.05
HIST2H3AQ71DI3 CCT6P1-202ENST00000442266 1317 ntTSL 2 BASIC15.37■□□□□ 0.05
HIST2H3AQ71DI3 ADAMTS13-206ENST00000371929 4934 ntAPPRIS P4 TSL 1 (best) BASIC15.37■□□□□ 0.05
HIST2H3AQ71DI3 WDR13-201ENST00000218056 2124 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
HIST2H3AQ71DI3 AC233702.3-201ENST00000578656 1387 ntBASIC15.36■□□□□ 0.05
HIST2H3AQ71DI3 HAS3-205ENST00000569188 2170 ntAPPRIS P1 TSL 2 BASIC15.36■□□□□ 0.05
HIST2H3AQ71DI3 JMJD4-201ENST00000366758 2595 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
HIST2H3AQ71DI3 COL4A2-201ENST00000360467 6281 ntAPPRIS P1 TSL 5 BASIC15.36■□□□□ 0.05
Retrieved 100 of 98,524 protein–RNA pairs in 27.8 ms