Protein–RNA interactions for Protein: Q6PJP8

DCLRE1A, DNA cross-link repair 1A protein, humanhuman

Predictions only

Length 1,040 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DCLRE1AQ6PJP8 MECP2-205ENST00000453960 1729 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
DCLRE1AQ6PJP8 BPGM-202ENST00000393132 2051 ntAPPRIS P1 TSL 5 BASIC18.65■□□□□ 0.58
DCLRE1AQ6PJP8 PKN1-201ENST00000242783 3069 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
DCLRE1AQ6PJP8 SH2B1-202ENST00000337120 6043 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
DCLRE1AQ6PJP8 CCKBR-203ENST00000525462 2138 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
DCLRE1AQ6PJP8 WSCD1-209ENST00000574232 2129 ntAPPRIS P1 TSL 5 BASIC18.65■□□□□ 0.58
DCLRE1AQ6PJP8 ANKRD17-211ENST00000639793 3486 ntTSL 5 BASIC18.65■□□□□ 0.58
DCLRE1AQ6PJP8 WNT5B-201ENST00000310594 2184 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
DCLRE1AQ6PJP8 ARNT-212ENST00000515192 2892 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
DCLRE1AQ6PJP8 MTSS1L-204ENST00000616026 2241 ntAPPRIS ALT2 TSL 5 BASIC18.65■□□□□ 0.58
DCLRE1AQ6PJP8 DOK7-201ENST00000340083 2562 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
DCLRE1AQ6PJP8 DOK7-203ENST00000507039 2551 ntTSL 2 BASIC18.65■□□□□ 0.58
DCLRE1AQ6PJP8 NPEPL1-204ENST00000525967 1917 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
DCLRE1AQ6PJP8 ENTPD6-209ENST00000433259 2654 ntTSL 5 BASIC18.65■□□□□ 0.58
DCLRE1AQ6PJP8 ZNF133-210ENST00000535822 2341 ntTSL 3 BASIC18.65■□□□□ 0.58
DCLRE1AQ6PJP8 AC125494.1-203ENST00000396799 1622 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
DCLRE1AQ6PJP8 ALKBH6-201ENST00000252984 955 ntAPPRIS ALT2 TSL 1 (best) BASIC18.65■□□□□ 0.58
DCLRE1AQ6PJP8 ENSA-206ENST00000361631 725 ntTSL 2 BASIC18.65■□□□□ 0.58
DCLRE1AQ6PJP8 LYPLA2-204ENST00000374505 907 ntTSL 3 BASIC18.65■□□□□ 0.58
DCLRE1AQ6PJP8 CD99-204ENST00000381187 892 ntAPPRIS ALT2 TSL 2 BASIC18.65■□□□□ 0.58
DCLRE1AQ6PJP8 AL121672.1-201ENST00000439423 1181 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
DCLRE1AQ6PJP8 AC002116.1-201ENST00000473572 1130 ntTSL 2 BASIC18.65■□□□□ 0.58
DCLRE1AQ6PJP8 PLA2G12A-202ENST00000502283 1189 ntAPPRIS ALT2 TSL 1 (best) BASIC18.65■□□□□ 0.58
DCLRE1AQ6PJP8 AC135050.2-203ENST00000529564 725 ntAPPRIS P1 TSL 4 BASIC18.65■□□□□ 0.58
DCLRE1AQ6PJP8 BRICD5-202ENST00000562360 783 ntTSL 2 BASIC18.65■□□□□ 0.58
DCLRE1AQ6PJP8 AC040169.1-201ENST00000565382 521 ntBASIC18.65■□□□□ 0.58
DCLRE1AQ6PJP8 C1QL3-202ENST00000619991 783 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
DCLRE1AQ6PJP8 CR381653.1-203ENST00000625153 577 ntTSL 5 BASIC18.65■□□□□ 0.58
DCLRE1AQ6PJP8 DAG1-221ENST00000541308 5676 ntAPPRIS P1 TSL 5 BASIC18.65■□□□□ 0.58
DCLRE1AQ6PJP8 ARF1-214ENST00000541182 2006 ntAPPRIS P1 TSL 2 BASIC18.65■□□□□ 0.58
DCLRE1AQ6PJP8 AC068888.1-203ENST00000546566 1650 ntTSL 2 BASIC18.65■□□□□ 0.58
DCLRE1AQ6PJP8 PWP1-202ENST00000541166 1722 ntTSL 2 BASIC18.65■□□□□ 0.58
DCLRE1AQ6PJP8 CBLC-202ENST00000341505 1441 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
DCLRE1AQ6PJP8 GALNT10-201ENST00000297107 5961 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
DCLRE1AQ6PJP8 TGDS-201ENST00000261296 1905 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.58
DCLRE1AQ6PJP8 WAC-202ENST00000347934 2839 ntTSL 5 BASIC18.64■□□□□ 0.58
DCLRE1AQ6PJP8 TNFSF13-205ENST00000396545 1593 ntAPPRIS ALT1 TSL 1 (best) BASIC18.64■□□□□ 0.58
DCLRE1AQ6PJP8 MST1R-214ENST00000613534 2025 ntTSL 1 (best) BASIC18.64■□□□□ 0.58
DCLRE1AQ6PJP8 CFC1-202ENST00000615342 1554 ntTSL 5 BASIC18.64■□□□□ 0.58
DCLRE1AQ6PJP8 ULK3-220ENST00000569437 2611 ntAPPRIS ALT1 TSL 1 (best) BASIC18.64■□□□□ 0.57
DCLRE1AQ6PJP8 EIF2B5-201ENST00000273783 2655 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
DCLRE1AQ6PJP8 NOC2LP1-202ENST00000452600 2235 ntBASIC18.64■□□□□ 0.57
DCLRE1AQ6PJP8 SLC35E4-201ENST00000343605 2714 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
DCLRE1AQ6PJP8 CRYGEP-201ENST00000412192 528 ntBASIC18.64■□□□□ 0.57
DCLRE1AQ6PJP8 SLC25A6P5-201ENST00000435663 894 ntBASIC18.64■□□□□ 0.57
DCLRE1AQ6PJP8 HMGN1P19-201ENST00000436976 333 ntBASIC18.64■□□□□ 0.57
DCLRE1AQ6PJP8 TUBB4A-209ENST00000598006 565 ntTSL 2 BASIC18.64■□□□□ 0.57
DCLRE1AQ6PJP8 CRB3-204ENST00000600229 1078 ntAPPRIS ALT2 TSL 2 BASIC18.64■□□□□ 0.57
DCLRE1AQ6PJP8 AC064836.3-201ENST00000607928 673 ntBASIC18.64■□□□□ 0.57
DCLRE1AQ6PJP8 AC244517.5-205ENST00000623615 575 ntTSL 4 BASIC18.64■□□□□ 0.57
DCLRE1AQ6PJP8 AL805961.1-202ENST00000641562 540 ntBASIC18.64■□□□□ 0.57
DCLRE1AQ6PJP8 GYG1-214ENST00000627418 1831 ntTSL 5 BASIC18.64■□□□□ 0.57
DCLRE1AQ6PJP8 PSMC3IP-204ENST00000587209 1381 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
DCLRE1AQ6PJP8 DYRK1B-203ENST00000430012 2007 ntAPPRIS ALT1 TSL 5 BASIC18.64■□□□□ 0.57
DCLRE1AQ6PJP8 SEPT4-201ENST00000317256 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC18.64■□□□□ 0.57
DCLRE1AQ6PJP8 ZNF302-206ENST00000505242 2849 ntAPPRIS P3 TSL 1 (best) BASIC18.64■□□□□ 0.57
DCLRE1AQ6PJP8 TBC1D1-203ENST00000402522 1567 ntTSL 2 BASIC18.64■□□□□ 0.57
DCLRE1AQ6PJP8 ELN-202ENST00000320399 2274 ntAPPRIS ALT2 TSL 5 BASIC18.63■□□□□ 0.57
DCLRE1AQ6PJP8 MBD1-206ENST00000382948 2434 ntAPPRIS P3 TSL 2 BASIC18.63■□□□□ 0.57
DCLRE1AQ6PJP8 LRP3-201ENST00000253193 3807 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
DCLRE1AQ6PJP8 USP25-204ENST00000400183 5341 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
DCLRE1AQ6PJP8 ARPC4-201ENST00000397261 2582 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
DCLRE1AQ6PJP8 BTBD11-201ENST00000280758 5767 ntAPPRIS P3 TSL 5 BASIC18.63■□□□□ 0.57
DCLRE1AQ6PJP8 RAB4A-205ENST00000618010 2799 ntTSL 3 BASIC18.63■□□□□ 0.57
DCLRE1AQ6PJP8 SCP2-202ENST00000371513 2003 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
DCLRE1AQ6PJP8 RAI2-203ENST00000415486 2037 ntTSL 2 BASIC18.63■□□□□ 0.57
DCLRE1AQ6PJP8 MARK2-209ENST00000509502 2862 ntAPPRIS ALT2 TSL 2 BASIC18.63■□□□□ 0.57
DCLRE1AQ6PJP8 WDR13-201ENST00000218056 2124 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
DCLRE1AQ6PJP8 ELOF1-201ENST00000252445 1019 ntAPPRIS P1 TSL 2 BASIC18.63■□□□□ 0.57
DCLRE1AQ6PJP8 SGF29-201ENST00000317058 1153 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
DCLRE1AQ6PJP8 YIF1B-203ENST00000339413 1225 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
DCLRE1AQ6PJP8 IGKV4-1-201ENST00000390243 538 ntAPPRIS P1 BASIC18.63■□□□□ 0.57
DCLRE1AQ6PJP8 PTCHD3P3-201ENST00000403073 906 ntBASIC18.63■□□□□ 0.57
DCLRE1AQ6PJP8 ANKRD54-202ENST00000406423 954 ntTSL 3 BASIC18.63■□□□□ 0.57
DCLRE1AQ6PJP8 C6orf226-201ENST00000408925 552 ntAPPRIS P1 BASIC18.63■□□□□ 0.57
DCLRE1AQ6PJP8 ACTG1P4-201ENST00000425123 1122 ntBASIC18.63■□□□□ 0.57
DCLRE1AQ6PJP8 PRSS29P-201ENST00000440800 595 ntBASIC18.63■□□□□ 0.57
DCLRE1AQ6PJP8 CDKN2A-209ENST00000498628 926 ntTSL 2 BASIC18.63■□□□□ 0.57
DCLRE1AQ6PJP8 ZFPM1-203ENST00000562437 502 ntTSL 2 BASIC18.63■□□□□ 0.57
DCLRE1AQ6PJP8 AC008992.1-201ENST00000591132 446 ntTSL 2 BASIC18.63■□□□□ 0.57
DCLRE1AQ6PJP8 AC010327.4-202ENST00000591484 748 ntBASIC18.63■□□□□ 0.57
DCLRE1AQ6PJP8 LINC01666-201ENST00000623794 845 ntTSL 5 BASIC18.63■□□□□ 0.57
DCLRE1AQ6PJP8 LINC00574-201ENST00000420557 2318 ntTSL 2 BASIC18.63■□□□□ 0.57
DCLRE1AQ6PJP8 PCCA-203ENST00000376286 2481 ntTSL 2 BASIC18.63■□□□□ 0.57
DCLRE1AQ6PJP8 EIF3J-201ENST00000261868 2569 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
DCLRE1AQ6PJP8 NOX4-207ENST00000525196 1555 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
DCLRE1AQ6PJP8 MIOX-202ENST00000395732 1658 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
DCLRE1AQ6PJP8 SLC35G6-201ENST00000412468 1697 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
DCLRE1AQ6PJP8 HOXC6-201ENST00000243108 1733 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
DCLRE1AQ6PJP8 ST8SIA4-202ENST00000451528 1794 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
DCLRE1AQ6PJP8 CAP2-202ENST00000378990 1812 ntTSL 2 BASIC18.63■□□□□ 0.57
DCLRE1AQ6PJP8 C12orf65-202ENST00000366329 1901 ntAPPRIS P2 TSL 2 BASIC18.62■□□□□ 0.57
DCLRE1AQ6PJP8 ARSA-204ENST00000395621 1918 ntAPPRIS P1 TSL 2 BASIC18.62■□□□□ 0.57
DCLRE1AQ6PJP8 TRNT1-205ENST00000402675 1935 ntTSL 2 BASIC18.62■□□□□ 0.57
DCLRE1AQ6PJP8 UQCRC1-201ENST00000203407 1985 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
DCLRE1AQ6PJP8 HDAC10-202ENST00000349505 1950 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
DCLRE1AQ6PJP8 GNAZ-203ENST00000615612 3333 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
DCLRE1AQ6PJP8 LUC7L-202ENST00000337351 2097 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
DCLRE1AQ6PJP8 FXYD6-204ENST00000526014 2171 ntAPPRIS P2 TSL 1 (best) BASIC18.62■□□□□ 0.57
DCLRE1AQ6PJP8 SLC44A3-201ENST00000271227 2388 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Retrieved 100 of 98,524 protein–RNA pairs in 27.8 ms