Protein–RNA interactions for Protein: Q6P499

NIPAL3, NIPA-like protein 3, humanhuman

Predictions only

Length 406 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NIPAL3Q6P499 ISCA1-202ENST00000326094 1264 ntTSL 3 BASIC15.96■□□□□ 0.15
NIPAL3Q6P499 DDX43P3-201ENST00000441064 443 ntBASIC15.96■□□□□ 0.15
NIPAL3Q6P499 VCX3B-203ENST00000444481 812 ntAPPRIS ALT2 TSL 5 BASIC15.96■□□□□ 0.15
NIPAL3Q6P499 RBM14-RBM4-203ENST00000500635 829 ntTSL 2 BASIC15.96■□□□□ 0.15
NIPAL3Q6P499 NTF4-201ENST00000593537 932 ntAPPRIS P1 BASIC15.96■□□□□ 0.15
NIPAL3Q6P499 ZNF575-205ENST00000601282 1086 ntAPPRIS P1 TSL 2 BASIC15.96■□□□□ 0.15
NIPAL3Q6P499 AL121672.3-201ENST00000608644 468 ntBASIC15.96■□□□□ 0.15
NIPAL3Q6P499 VCX3A-203ENST00000612369 812 ntAPPRIS ALT2 TSL 5 BASIC15.96■□□□□ 0.15
NIPAL3Q6P499 IGHV3-41-201ENST00000613121 348 ntBASIC15.96■□□□□ 0.15
NIPAL3Q6P499 CALM2-209ENST00000628793 1103 ntTSL 5 BASIC15.96■□□□□ 0.15
NIPAL3Q6P499 ANKRD20A8P-203ENST00000641373 517 ntBASIC15.96■□□□□ 0.15
NIPAL3Q6P499 ELN-207ENST00000380562 2240 ntAPPRIS ALT2 TSL 1 (best) BASIC15.96■□□□□ 0.15
NIPAL3Q6P499 SCUBE2-202ENST00000450649 2912 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
NIPAL3Q6P499 CDCP1-201ENST00000296129 6006 ntAPPRIS P3 TSL 1 (best) BASIC15.96■□□□□ 0.15
NIPAL3Q6P499 ARHGAP9-204ENST00000430041 2323 ntAPPRIS ALT2 TSL 1 (best) BASIC15.96■□□□□ 0.15
NIPAL3Q6P499 PYCR1-217ENST00000629768 1740 ntTSL 5 BASIC15.96■□□□□ 0.15
NIPAL3Q6P499 VKORC1L1-201ENST00000360768 5899 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.14
NIPAL3Q6P499 KMT5C-212ENST00000630497 2037 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
NIPAL3Q6P499 SNX14-210ENST00000505648 3193 ntTSL 2 BASIC15.95■□□□□ 0.14
NIPAL3Q6P499 TBC1D2-202ENST00000375063 2100 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
NIPAL3Q6P499 DNAJA3-202ENST00000355296 2591 ntAPPRIS ALT1 TSL 1 (best) BASIC15.95■□□□□ 0.14
NIPAL3Q6P499 ICA1-201ENST00000265577 2309 ntAPPRIS ALT1 TSL 5 BASIC15.95■□□□□ 0.14
NIPAL3Q6P499 UNC119-204ENST00000470125 2050 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
NIPAL3Q6P499 AL079303.2-201ENST00000555107 2613 ntTSL 3 BASIC15.95■□□□□ 0.14
NIPAL3Q6P499 XKR7-201ENST00000562532 7844 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
NIPAL3Q6P499 BCL2L10-201ENST00000260442 1249 ntAPPRIS P3 TSL 1 (best) BASIC15.95■□□□□ 0.14
NIPAL3Q6P499 GPR32-201ENST00000270590 1269 ntAPPRIS P1 BASIC15.95■□□□□ 0.14
NIPAL3Q6P499 AURKAIP1-202ENST00000338338 1047 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
NIPAL3Q6P499 AC008610.1-201ENST00000504573 393 ntTSL 2 BASIC15.95■□□□□ 0.14
NIPAL3Q6P499 AL161669.1-201ENST00000559843 386 ntTSL 3 BASIC15.95■□□□□ 0.14
NIPAL3Q6P499 AC004771.4-201ENST00000576752 474 ntTSL 5 BASIC15.95■□□□□ 0.14
NIPAL3Q6P499 AL449423.1-201ENST00000578935 435 ntTSL 3 BASIC15.95■□□□□ 0.14
NIPAL3Q6P499 AC091076.1-201ENST00000610741 619 ntBASIC15.95■□□□□ 0.14
NIPAL3Q6P499 ASAH1-251ENST00000637561 929 ntTSL 2 BASIC15.95■□□□□ 0.14
NIPAL3Q6P499 VPS72-207ENST00000640458 689 ntTSL 5 BASIC15.95■□□□□ 0.14
NIPAL3Q6P499 GOSR1-201ENST00000225724 6039 ntAPPRIS P3 TSL 1 (best) BASIC15.95■□□□□ 0.14
NIPAL3Q6P499 CNTRL-208ENST00000373865 1917 ntTSL 5 BASIC15.95■□□□□ 0.14
NIPAL3Q6P499 PODXL-201ENST00000322985 2011 ntAPPRIS ALT2 TSL 1 (best) BASIC15.95■□□□□ 0.14
NIPAL3Q6P499 TMED3-201ENST00000299705 1475 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
NIPAL3Q6P499 DHRS7B-206ENST00000579303 1479 ntAPPRIS ALT1 TSL 5 BASIC15.95■□□□□ 0.14
NIPAL3Q6P499 BCAM-206ENST00000589651 2686 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
NIPAL3Q6P499 HADHB-208ENST00000537713 2142 ntTSL 2 BASIC15.95■□□□□ 0.14
NIPAL3Q6P499 EXD3-201ENST00000340951 2872 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
NIPAL3Q6P499 LINC00905-202ENST00000588117 1768 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
NIPAL3Q6P499 ANAPC2-201ENST00000323927 2632 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
NIPAL3Q6P499 SFTPB-202ENST00000409383 1867 ntAPPRIS P2 TSL 1 (best) BASIC15.95■□□□□ 0.14
NIPAL3Q6P499 GALNT11-205ENST00000430044 2727 ntAPPRIS P1 TSL 5 BASIC15.95■□□□□ 0.14
NIPAL3Q6P499 CRELD1-201ENST00000326434 1994 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
NIPAL3Q6P499 RNF128-201ENST00000255499 2817 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
NIPAL3Q6P499 ASB6-203ENST00000450050 4535 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
NIPAL3Q6P499 C12orf56-207ENST00000543942 3242 ntAPPRIS P1 TSL 5 BASIC15.94■□□□□ 0.14
NIPAL3Q6P499 ARHGAP6-202ENST00000337414 5117 ntAPPRIS P4 TSL 1 (best) BASIC15.94■□□□□ 0.14
NIPAL3Q6P499 AP003717.1-202ENST00000537019 1412 ntTSL 5 BASIC15.94■□□□□ 0.14
NIPAL3Q6P499 MYO1B-204ENST00000392318 5082 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
NIPAL3Q6P499 IMP4-201ENST00000259239 1740 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
NIPAL3Q6P499 RABL6-203ENST00000371663 3078 ntAPPRIS ALT2 TSL 1 (best) BASIC15.94■□□□□ 0.14
NIPAL3Q6P499 ATOH1-201ENST00000306011 2212 ntAPPRIS P1 BASIC15.94■□□□□ 0.14
NIPAL3Q6P499 IGFBP3-203ENST00000381086 2322 ntTSL 2 BASIC15.94■□□□□ 0.14
NIPAL3Q6P499 MEST-202ENST00000341441 2443 ntAPPRIS ALT1 TSL 1 (best) BASIC15.94■□□□□ 0.14
NIPAL3Q6P499 HMGXB3-201ENST00000502717 4974 ntAPPRIS P2 TSL 1 (best) BASIC15.94■□□□□ 0.14
NIPAL3Q6P499 CD320-201ENST00000301458 1250 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
NIPAL3Q6P499 TYMSOS-201ENST00000323813 844 ntTSL 1 (best) BASIC15.94■□□□□ 0.14
NIPAL3Q6P499 BET1L-202ENST00000332865 533 ntTSL 5 BASIC15.94■□□□□ 0.14
NIPAL3Q6P499 ROMO1-204ENST00000374078 498 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
NIPAL3Q6P499 CXorf40A-202ENST00000393985 1148 ntAPPRIS P3 TSL 1 (best) BASIC15.94■□□□□ 0.14
NIPAL3Q6P499 PLAC8-202ENST00000411416 786 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
NIPAL3Q6P499 MOBP-204ENST00000420739 940 ntAPPRIS P4 TSL 5 BASIC15.94■□□□□ 0.14
NIPAL3Q6P499 CATIP-AS1-202ENST00000441749 480 ntTSL 1 (best) BASIC15.94■□□□□ 0.14
NIPAL3Q6P499 DYDC2-206ENST00000444807 1173 ntAPPRIS P3 TSL 3 BASIC15.94■□□□□ 0.14
NIPAL3Q6P499 HOXB-AS3-203ENST00000465846 434 ntTSL 3 BASIC15.94■□□□□ 0.14
NIPAL3Q6P499 AC073111.4-202ENST00000486297 585 ntTSL 4 BASIC15.94■□□□□ 0.14
NIPAL3Q6P499 AC027682.6-202ENST00000621378 795 ntTSL 2 BASIC15.94■□□□□ 0.14
NIPAL3Q6P499 AL807752.6-202ENST00000622933 765 ntAPPRIS P5 TSL 3 BASIC15.94■□□□□ 0.14
NIPAL3Q6P499 AC124864.1-201ENST00000623408 392 ntBASIC15.94■□□□□ 0.14
NIPAL3Q6P499 KRT8P47-201ENST00000604727 1398 ntBASIC15.94■□□□□ 0.14
NIPAL3Q6P499 AQP5-201ENST00000293599 1450 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
NIPAL3Q6P499 IFNLR1-205ENST00000374421 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC15.94■□□□□ 0.14
NIPAL3Q6P499 DHRS4L2-203ENST00000534993 1450 ntTSL 3 BASIC15.94■□□□□ 0.14
NIPAL3Q6P499 MED29-202ENST00000594368 1471 ntTSL 2 BASIC15.94■□□□□ 0.14
NIPAL3Q6P499 AC027312.1-201ENST00000523591 1571 ntTSL 5 BASIC15.94■□□□□ 0.14
NIPAL3Q6P499 CEACAM16-202ENST00000587331 1692 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
NIPAL3Q6P499 ELOA3-201ENST00000330682 1877 ntAPPRIS P1 BASIC15.94■□□□□ 0.14
NIPAL3Q6P499 NBL1-210ENST00000615215 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC15.94■□□□□ 0.14
NIPAL3Q6P499 NFATC4-218ENST00000554966 2506 ntAPPRIS ALT2 TSL 1 (best) BASIC15.94■□□□□ 0.14
NIPAL3Q6P499 NFATC4-225ENST00000556169 2509 ntAPPRIS ALT2 TSL 1 (best) BASIC15.94■□□□□ 0.14
NIPAL3Q6P499 BATF2-202ENST00000435842 1949 ntTSL 1 (best) BASIC15.94■□□□□ 0.14
NIPAL3Q6P499 TMEM82-201ENST00000375782 1520 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
NIPAL3Q6P499 DUSP4-201ENST00000240100 5537 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
NIPAL3Q6P499 FRMD4A-203ENST00000357447 6821 ntAPPRIS P2 TSL 1 (best) BASIC15.93■□□□□ 0.14
NIPAL3Q6P499 ARHGAP26-202ENST00000378004 9200 ntAPPRIS ALT1 TSL 1 (best) BASIC15.93■□□□□ 0.14
NIPAL3Q6P499 PFKFB3-215ENST00000536985 2094 ntTSL 2 BASIC15.93■□□□□ 0.14
NIPAL3Q6P499 KLHL33-201ENST00000344581 1863 ntTSL 5 BASIC15.93■□□□□ 0.14
NIPAL3Q6P499 CPT2-210ENST00000637252 2739 ntTSL 5 BASIC15.93■□□□□ 0.14
NIPAL3Q6P499 MATN3-201ENST00000407540 2524 ntAPPRIS P2 TSL 1 (best) BASIC15.93■□□□□ 0.14
NIPAL3Q6P499 AGPAT2-205ENST00000538402 1357 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
NIPAL3Q6P499 KCNB1-203ENST00000635465 4114 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
NIPAL3Q6P499 AL731569.1-201ENST00000428940 3058 ntTSL 2 BASIC15.93■□□□□ 0.14
NIPAL3Q6P499 PGLS-201ENST00000252603 1028 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
NIPAL3Q6P499 AC093734.1-201ENST00000416100 242 ntTSL 3 BASIC15.93■□□□□ 0.14
NIPAL3Q6P499 LINC01128-207ENST00000449005 874 ntTSL 1 (best) BASIC15.93■□□□□ 0.14
Retrieved 100 of 98,524 protein–RNA pairs in 27.8 ms