Protein–RNA interactions for Protein: Q6P2S7

TTC41P, Putative tetratricopeptide repeat protein 41, humanhuman

Predictions only

Length 1,318 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TTC41PQ6P2S7 POMT2-201ENST00000261534 4876 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
TTC41PQ6P2S7 VPS13B-201ENST00000355155 2822 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
TTC41PQ6P2S7 T-201ENST00000296946 2436 ntAPPRIS P1 TSL 5 BASIC21.22■□□□□ 0.99
TTC41PQ6P2S7 APBB1-224ENST00000621678 1907 ntTSL 5 BASIC21.22■□□□□ 0.99
TTC41PQ6P2S7 ASB10-202ENST00000377867 1738 ntTSL 2 BASIC21.22■□□□□ 0.99
TTC41PQ6P2S7 AC093525.9-201ENST00000624961 1746 ntBASIC21.22■□□□□ 0.99
TTC41PQ6P2S7 DBNL-213ENST00000452943 1513 ntTSL 2 BASIC21.22■□□□□ 0.99
TTC41PQ6P2S7 JMJD4-201ENST00000366758 2595 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
TTC41PQ6P2S7 PCDHA2-203ENST00000526136 5254 ntAPPRIS P2 TSL 1 (best) BASIC21.22■□□□□ 0.99
TTC41PQ6P2S7 GTF2IP1-210ENST00000622829 3605 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
TTC41PQ6P2S7 PFKFB3-215ENST00000536985 2094 ntTSL 2 BASIC21.22■□□□□ 0.99
TTC41PQ6P2S7 EPHX2-204ENST00000518379 1959 ntAPPRIS ALT2 TSL 5 BASIC21.22■□□□□ 0.99
TTC41PQ6P2S7 RANBP3-220ENST00000591092 1783 ntAPPRIS ALT2 TSL 1 (best) BASIC21.22■□□□□ 0.99
TTC41PQ6P2S7 IFNL4-204ENST00000634967 1493 ntAPPRIS ALT2 TSL 1 (best) BASIC21.22■□□□□ 0.99
TTC41PQ6P2S7 THAP3-201ENST00000054650 1366 ntAPPRIS ALT2 TSL 1 (best) BASIC21.22■□□□□ 0.99
TTC41PQ6P2S7 PAN3-AS1-201ENST00000563843 1351 ntBASIC21.22■□□□□ 0.99
TTC41PQ6P2S7 NRP1-204ENST00000374822 2213 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
TTC41PQ6P2S7 PTPMT1-201ENST00000326656 928 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
TTC41PQ6P2S7 SIGLEC8-202ENST00000340550 1293 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
TTC41PQ6P2S7 HOXB-AS4-202ENST00000480386 566 ntTSL 4 BASIC21.22■□□□□ 0.99
TTC41PQ6P2S7 REXO2-206ENST00000539275 710 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
TTC41PQ6P2S7 AC092725.1-201ENST00000565783 499 ntTSL 4 BASIC21.22■□□□□ 0.99
TTC41PQ6P2S7 AC011455.1-201ENST00000593830 504 ntTSL 3 BASIC21.22■□□□□ 0.99
TTC41PQ6P2S7 AC002985.2-201ENST00000601106 957 ntTSL 4 BASIC21.22■□□□□ 0.99
TTC41PQ6P2S7 AC132872.3-201ENST00000620937 629 ntTSL 5 BASIC21.22■□□□□ 0.99
TTC41PQ6P2S7 MTA1-207ENST00000435036 2888 ntTSL 5 BASIC21.22■□□□□ 0.99
TTC41PQ6P2S7 GOLGA2P9-203ENST00000600260 2033 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
TTC41PQ6P2S7 AL356309.3-201ENST00000624132 1934 ntBASIC21.22■□□□□ 0.99
TTC41PQ6P2S7 CLDN4-201ENST00000340958 1831 ntAPPRIS P1 BASIC21.22■□□□□ 0.99
TTC41PQ6P2S7 HMOX2-217ENST00000619528 1829 ntAPPRIS P1 TSL 5 BASIC21.22■□□□□ 0.99
TTC41PQ6P2S7 RMDN3-202ENST00000338376 2251 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
TTC41PQ6P2S7 GHRHR-205ENST00000409904 1613 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
TTC41PQ6P2S7 IVNS1ABP-202ENST00000367498 4199 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
TTC41PQ6P2S7 AC016757.1-205ENST00000470346 1888 ntTSL 2 BASIC21.21■□□□□ 0.99
TTC41PQ6P2S7 ATOH1-201ENST00000306011 2212 ntAPPRIS P1 BASIC21.21■□□□□ 0.99
TTC41PQ6P2S7 SLC29A4-202ENST00000396872 5685 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
TTC41PQ6P2S7 ATP6AP2-224ENST00000637327 1929 ntAPPRIS ALT2 TSL 2 BASIC21.21■□□□□ 0.99
TTC41PQ6P2S7 DDX28-201ENST00000332395 2169 ntAPPRIS P1 BASIC21.21■□□□□ 0.99
TTC41PQ6P2S7 RAB11FIP2-201ENST00000355624 6061 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
TTC41PQ6P2S7 TRIM11-202ENST00000366699 2511 ntTSL 2 BASIC21.21■□□□□ 0.99
TTC41PQ6P2S7 UXT-202ENST00000335890 701 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
TTC41PQ6P2S7 CMTM2-202ENST00000379486 904 ntAPPRIS ALT2 TSL 1 (best) BASIC21.21■□□□□ 0.99
TTC41PQ6P2S7 LINC02247-201ENST00000417135 743 ntTSL 3 BASIC21.21■□□□□ 0.99
TTC41PQ6P2S7 ACTG1P4-201ENST00000425123 1122 ntBASIC21.21■□□□□ 0.99
TTC41PQ6P2S7 GLI4-207ENST00000521682 1082 ntTSL 3 BASIC21.21■□□□□ 0.99
TTC41PQ6P2S7 SELENOS-203ENST00000526049 1188 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
TTC41PQ6P2S7 AF238378.1-201ENST00000526806 358 ntBASIC21.21■□□□□ 0.99
TTC41PQ6P2S7 NKAPP1-205ENST00000585790 367 ntBASIC21.21■□□□□ 0.99
TTC41PQ6P2S7 FTSJ1-201ENST00000019019 1986 ntAPPRIS ALT1 TSL 2 BASIC21.21■□□□□ 0.99
TTC41PQ6P2S7 C2CD2L-201ENST00000336702 4771 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
TTC41PQ6P2S7 AC004817.3-201ENST00000602957 2129 ntBASIC21.21■□□□□ 0.99
TTC41PQ6P2S7 MBOAT1-201ENST00000324607 1794 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
TTC41PQ6P2S7 PPARD-202ENST00000337400 2041 ntTSL 5 BASIC21.21■□□□□ 0.99
TTC41PQ6P2S7 GPBAR1-204ENST00000522678 2003 ntAPPRIS P1 TSL 2 BASIC21.21■□□□□ 0.99
TTC41PQ6P2S7 CCT7-215ENST00000539919 2031 ntTSL 2 BASIC21.21■□□□□ 0.99
TTC41PQ6P2S7 FGFR4-207ENST00000502906 2638 ntAPPRIS P4 TSL 1 (best) BASIC21.21■□□□□ 0.99
TTC41PQ6P2S7 CHRM2-201ENST00000320658 1694 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
TTC41PQ6P2S7 MAN2A1-201ENST00000261483 4667 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.99
TTC41PQ6P2S7 INPP4A-205ENST00000409851 3365 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
TTC41PQ6P2S7 CACNA1A-246ENST00000637736 8340 ntAPPRIS ALT2 TSL 5 BASIC21.2■□□□□ 0.98
TTC41PQ6P2S7 ETNK2-203ENST00000367202 2434 ntAPPRIS P3 TSL 1 (best) BASIC21.2■□□□□ 0.98
TTC41PQ6P2S7 PHF20L1-201ENST00000220847 3297 ntTSL 5 BASIC21.2■□□□□ 0.98
TTC41PQ6P2S7 C8orf33-201ENST00000331434 2677 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
TTC41PQ6P2S7 B3GNT9-201ENST00000449549 2917 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
TTC41PQ6P2S7 PCDHGC3-205ENST00000617641 2346 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
TTC41PQ6P2S7 OTUD5-204ENST00000428668 1493 ntTSL 2 BASIC21.2■□□□□ 0.98
TTC41PQ6P2S7 SULF2-201ENST00000359930 4915 ntAPPRIS P4 TSL 1 (best) BASIC21.2■□□□□ 0.98
TTC41PQ6P2S7 FOXP1-210ENST00000484350 1996 ntTSL 2 BASIC21.2■□□□□ 0.98
TTC41PQ6P2S7 NDRG4-202ENST00000356752 1375 ntTSL 2 BASIC21.2■□□□□ 0.98
TTC41PQ6P2S7 MIR202HG-201ENST00000300167 384 ntTSL 2 BASIC21.2■□□□□ 0.98
TTC41PQ6P2S7 SMOX-204ENST00000346595 982 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
TTC41PQ6P2S7 VMO1-202ENST00000354194 651 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
TTC41PQ6P2S7 CREM-211ENST00000374726 1207 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
TTC41PQ6P2S7 C6orf48-203ENST00000375638 847 ntAPPRIS P1 TSL 2 BASIC21.2■□□□□ 0.98
TTC41PQ6P2S7 C6orf48-207ENST00000375642 962 ntAPPRIS P1 TSL 2 BASIC21.2■□□□□ 0.98
TTC41PQ6P2S7 TM4SF19-TCTEX1D2-201ENST00000442633 964 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
TTC41PQ6P2S7 S100A2-206ENST00000497140 697 ntTSL 2 BASIC21.2■□□□□ 0.98
TTC41PQ6P2S7 BMF-207ENST00000559701 630 ntTSL 3 BASIC21.2■□□□□ 0.98
TTC41PQ6P2S7 COPE-211ENST00000600932 1144 ntTSL 5 BASIC21.2■□□□□ 0.98
TTC41PQ6P2S7 AL590235.2-202ENST00000602543 594 ntTSL 5 BASIC21.2■□□□□ 0.98
TTC41PQ6P2S7 MFSD2A-202ENST00000372811 2154 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
TTC41PQ6P2S7 MFGE8-201ENST00000268150 1937 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
TTC41PQ6P2S7 ARNTL-205ENST00000403510 2745 ntTSL 2 BASIC21.2■□□□□ 0.98
TTC41PQ6P2S7 DCBLD2-201ENST00000326840 6122 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
TTC41PQ6P2S7 TJP3-201ENST00000539908 2897 ntAPPRIS ALT2 TSL 2 BASIC21.2■□□□□ 0.98
TTC41PQ6P2S7 CACNA1A-218ENST00000635895 8657 ntAPPRIS ALT2 TSL 5 BASIC21.2■□□□□ 0.98
TTC41PQ6P2S7 CACNA1A-257ENST00000638009 8665 ntAPPRIS ALT2 TSL 1 (best) BASIC21.2■□□□□ 0.98
TTC41PQ6P2S7 TES-201ENST00000358204 2782 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
TTC41PQ6P2S7 KLK6-202ENST00000376851 1708 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
TTC41PQ6P2S7 CLDN15-202ENST00000401528 2131 ntAPPRIS P1 TSL 2 BASIC21.19■□□□□ 0.98
TTC41PQ6P2S7 SIL1-201ENST00000265195 1895 ntAPPRIS P1 TSL 5 BASIC21.19■□□□□ 0.98
TTC41PQ6P2S7 ERLEC1-201ENST00000185150 2433 ntAPPRIS P3 TSL 1 (best) BASIC21.19■□□□□ 0.98
TTC41PQ6P2S7 AGPAT3-201ENST00000291572 5546 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
TTC41PQ6P2S7 CHRNA4-207ENST00000615287 5643 ntTSL 5 BASIC21.19■□□□□ 0.98
TTC41PQ6P2S7 GID4-202ENST00000376345 1391 ntTSL 3 BASIC21.19■□□□□ 0.98
TTC41PQ6P2S7 RHBDF1P1-201ENST00000427504 1941 ntBASIC21.19■□□□□ 0.98
TTC41PQ6P2S7 GPER1-204ENST00000401670 1542 ntAPPRIS P1 TSL 2 BASIC21.19■□□□□ 0.98
TTC41PQ6P2S7 TFEB-201ENST00000230323 2354 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
TTC41PQ6P2S7 PCCB-201ENST00000251654 1833 ntAPPRIS P3 TSL 1 (best) BASIC21.19■□□□□ 0.98
TTC41PQ6P2S7 FBXL3-201ENST00000355619 3503 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
Retrieved 100 of 98,524 protein–RNA pairs in 24.7 ms