Protein–RNA interactions for Protein: Q643R3

LPCAT4, Lysophospholipid acyltransferase LPCAT4, humanhuman

Predictions only

Length 524 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LPCAT4Q643R3 SYT7-209ENST00000542836 1362 ntTSL 5 BASIC16.52■□□□□ 0.24
LPCAT4Q643R3 NAT9-210ENST00000580301 1860 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
LPCAT4Q643R3 CFAP77-201ENST00000343036 1818 ntAPPRIS P3 TSL 2 BASIC16.52■□□□□ 0.24
LPCAT4Q643R3 ATP5L-201ENST00000300688 1577 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
LPCAT4Q643R3 SLC25A39-202ENST00000377095 1565 ntAPPRIS ALT1 TSL 1 (best) BASIC16.52■□□□□ 0.24
LPCAT4Q643R3 MAZ-212ENST00000568282 1593 ntTSL 5 BASIC16.52■□□□□ 0.24
LPCAT4Q643R3 GATA4-201ENST00000335135 3414 ntAPPRIS P3 TSL 5 BASIC16.52■□□□□ 0.24
LPCAT4Q643R3 JRK-203ENST00000571961 2687 ntAPPRIS ALT2 TSL 1 (best) BASIC16.52■□□□□ 0.24
LPCAT4Q643R3 MAP4K1-208ENST00000589130 2654 ntTSL 5 BASIC16.52■□□□□ 0.24
LPCAT4Q643R3 BAG5-202ENST00000337322 1960 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
LPCAT4Q643R3 TMUB2-209ENST00000587989 1969 ntAPPRIS ALT1 TSL 3 BASIC16.52■□□□□ 0.24
LPCAT4Q643R3 MIEF2-202ENST00000395703 718 ntTSL 3 BASIC16.52■□□□□ 0.24
LPCAT4Q643R3 ZDHHC20-204ENST00000415724 1296 ntAPPRIS ALT2 TSL 5 BASIC16.52■□□□□ 0.24
LPCAT4Q643R3 AC091133.2-201ENST00000505903 428 ntTSL 3 BASIC16.52■□□□□ 0.24
LPCAT4Q643R3 BAALC-AS1-206ENST00000521383 736 ntTSL 3 BASIC16.52■□□□□ 0.24
LPCAT4Q643R3 AF274858.3-202ENST00000569906 755 ntTSL 3 BASIC16.52■□□□□ 0.24
LPCAT4Q643R3 AC010336.4-201ENST00000595655 438 ntTSL 5 BASIC16.52■□□□□ 0.24
LPCAT4Q643R3 AC116407.2-201ENST00000613639 860 ntBASIC16.52■□□□□ 0.24
LPCAT4Q643R3 COX10-201ENST00000261643 2873 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
LPCAT4Q643R3 REPIN1-202ENST00000425389 2876 ntAPPRIS P3 BASIC16.52■□□□□ 0.24
LPCAT4Q643R3 SFTPA2-201ENST00000372325 2189 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
LPCAT4Q643R3 ACD-215ENST00000620761 1483 ntAPPRIS ALT2 TSL 1 (best) BASIC16.52■□□□□ 0.23
LPCAT4Q643R3 PCDHA13-202ENST00000409494 4884 ntTSL 1 (best) BASIC16.52■□□□□ 0.23
LPCAT4Q643R3 CSNK1A1-202ENST00000377843 2559 ntAPPRIS ALT1 TSL 1 (best) BASIC16.52■□□□□ 0.23
LPCAT4Q643R3 FAM182B-201ENST00000376403 1681 ntAPPRIS P5 TSL 1 (best) BASIC16.52■□□□□ 0.23
LPCAT4Q643R3 SLC2A14-202ENST00000396589 2335 ntAPPRIS P3 TSL 1 (best) BASIC16.52■□□□□ 0.23
LPCAT4Q643R3 GRAMD2B-201ENST00000285689 3175 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
LPCAT4Q643R3 SCLT1-208ENST00000506368 2096 ntAPPRIS ALT2 TSL 1 (best) BASIC16.52■□□□□ 0.23
LPCAT4Q643R3 TRAF2-201ENST00000247668 2264 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
LPCAT4Q643R3 ATG5-210ENST00000636437 2261 ntTSL 5 BASIC16.52■□□□□ 0.23
LPCAT4Q643R3 DUSP18-201ENST00000334679 2479 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
LPCAT4Q643R3 ESAM-201ENST00000278927 1826 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
LPCAT4Q643R3 SATB2-206ENST00000457245 2656 ntAPPRIS P1 TSL 2 BASIC16.52■□□□□ 0.23
LPCAT4Q643R3 MAST3-201ENST00000262811 5896 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
LPCAT4Q643R3 ARHGEF25-202ENST00000333972 2246 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
LPCAT4Q643R3 CEP72-201ENST00000264935 2434 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
LPCAT4Q643R3 C9orf64-203ENST00000376344 2443 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
LPCAT4Q643R3 CLMAT3-201ENST00000510576 1973 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
LPCAT4Q643R3 RECQL4-209ENST00000617875 3809 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
LPCAT4Q643R3 MED26-201ENST00000263390 3174 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
LPCAT4Q643R3 ARHGAP35-201ENST00000404338 8889 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
LPCAT4Q643R3 AL139130.1-201ENST00000451362 5586 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
LPCAT4Q643R3 AC006460.2-201ENST00000638173 4744 ntTSL 5 BASIC16.51■□□□□ 0.23
LPCAT4Q643R3 SPAG1-202ENST00000388798 3852 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
LPCAT4Q643R3 AL365203.3-201ENST00000609742 2057 ntBASIC16.51■□□□□ 0.23
LPCAT4Q643R3 RIMS1-210ENST00000491071 5047 ntTSL 5 BASIC16.51■□□□□ 0.23
LPCAT4Q643R3 SLC22A1-203ENST00000457470 1452 ntTSL 5 BASIC16.51■□□□□ 0.23
LPCAT4Q643R3 METTL21A-204ENST00000425132 869 ntTSL 2 BASIC16.51■□□□□ 0.23
LPCAT4Q643R3 LINC00708-201ENST00000428165 916 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
LPCAT4Q643R3 PPP1R14BP5-201ENST00000440334 435 ntBASIC16.51■□□□□ 0.23
LPCAT4Q643R3 LINC01637-201ENST00000444039 684 ntTSL 2 BASIC16.51■□□□□ 0.23
LPCAT4Q643R3 ASPHD1-203ENST00000483405 1115 ntAPPRIS ALT2 TSL 3 BASIC16.51■□□□□ 0.23
LPCAT4Q643R3 PPP1R14BP3-201ENST00000509033 445 ntBASIC16.51■□□□□ 0.23
LPCAT4Q643R3 AC140479.4-201ENST00000561715 463 ntTSL 4 BASIC16.51■□□□□ 0.23
LPCAT4Q643R3 AC083880.1-201ENST00000608266 535 ntBASIC16.51■□□□□ 0.23
LPCAT4Q643R3 AC004816.2-201ENST00000622856 284 ntTSL 5 BASIC16.51■□□□□ 0.23
LPCAT4Q643R3 CORO1B-210ENST00000627576 960 ntTSL 5 BASIC16.51■□□□□ 0.23
LPCAT4Q643R3 NEO1-201ENST00000261908 7088 ntAPPRIS P3 TSL 1 (best) BASIC16.51■□□□□ 0.23
LPCAT4Q643R3 IER2-203ENST00000588173 2934 ntAPPRIS P1 BASIC16.51■□□□□ 0.23
LPCAT4Q643R3 TOP1MT-218ENST00000523676 1982 ntTSL 5 BASIC16.51■□□□□ 0.23
LPCAT4Q643R3 AC005064.1-201ENST00000422488 2725 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
LPCAT4Q643R3 POC1A-203ENST00000474012 1760 ntAPPRIS ALT2 TSL 2 BASIC16.51■□□□□ 0.23
LPCAT4Q643R3 ACADS-202ENST00000411593 1398 ntTSL 2 BASIC16.51■□□□□ 0.23
LPCAT4Q643R3 LINC01270-201ENST00000371639 2281 ntTSL 2 BASIC16.5■□□□□ 0.23
LPCAT4Q643R3 SEPT8-204ENST00000378699 2289 ntTSL 5 BASIC16.5■□□□□ 0.23
LPCAT4Q643R3 SYNRG-223ENST00000616179 4050 ntAPPRIS ALT2 TSL 5 BASIC16.5■□□□□ 0.23
LPCAT4Q643R3 ZDHHC20-209ENST00000542645 5315 ntAPPRIS ALT2 TSL 2 BASIC16.5■□□□□ 0.23
LPCAT4Q643R3 AGER-205ENST00000375069 1538 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
LPCAT4Q643R3 ZFAND5-205ENST00000376962 2785 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
LPCAT4Q643R3 PPP1CB-202ENST00000358506 4771 ntAPPRIS P1 TSL 5 BASIC16.5■□□□□ 0.23
LPCAT4Q643R3 GALE-201ENST00000374497 1488 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
LPCAT4Q643R3 AL079301.1-201ENST00000424580 1633 ntTSL 2 BASIC16.5■□□□□ 0.23
LPCAT4Q643R3 SARS2-212ENST00000600042 1630 ntTSL 2 BASIC16.5■□□□□ 0.23
LPCAT4Q643R3 C10orf76-201ENST00000311122 724 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
LPCAT4Q643R3 SBK2-201ENST00000344158 1056 ntAPPRIS P1 TSL 2 BASIC16.5■□□□□ 0.23
LPCAT4Q643R3 SBK2-202ENST00000413299 1085 ntAPPRIS P1 TSL 5 BASIC16.5■□□□□ 0.23
LPCAT4Q643R3 FAM207BP-201ENST00000447172 505 ntBASIC16.5■□□□□ 0.23
LPCAT4Q643R3 TSPY6P-201ENST00000448518 926 ntBASIC16.5■□□□□ 0.23
LPCAT4Q643R3 SNHG6-203ENST00000520944 638 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
LPCAT4Q643R3 AC011611.3-201ENST00000552367 569 ntTSL 4 BASIC16.5■□□□□ 0.23
LPCAT4Q643R3 C17orf62-238ENST00000585064 1074 ntAPPRIS P1 TSL 2 BASIC16.5■□□□□ 0.23
LPCAT4Q643R3 AC003102.1-201ENST00000588279 569 ntTSL 4 BASIC16.5■□□□□ 0.23
LPCAT4Q643R3 ZNF599-203ENST00000588760 948 ntTSL 2 BASIC16.5■□□□□ 0.23
LPCAT4Q643R3 TEAD2-204ENST00000593945 2141 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
LPCAT4Q643R3 PFKL-212ENST00000628044 129 ntTSL 3 BASIC16.5■□□□□ 0.23
LPCAT4Q643R3 INTS11-247ENST00000540437 2629 ntTSL 2 BASIC16.5■□□□□ 0.23
LPCAT4Q643R3 MTHFD1L-203ENST00000367321 3604 ntAPPRIS P3 TSL 1 (best) BASIC16.5■□□□□ 0.23
LPCAT4Q643R3 BNC1-201ENST00000345382 4610 ntAPPRIS P3 TSL 1 (best) BASIC16.5■□□□□ 0.23
LPCAT4Q643R3 ASIC1-202ENST00000447966 3778 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
LPCAT4Q643R3 CXorf40A-209ENST00000441248 2411 ntAPPRIS P3 TSL 1 (best) BASIC16.5■□□□□ 0.23
LPCAT4Q643R3 IMP4-201ENST00000259239 1740 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
LPCAT4Q643R3 AFMID-201ENST00000327898 1700 ntAPPRIS ALT2 TSL 1 (best) BASIC16.5■□□□□ 0.23
LPCAT4Q643R3 POM121C-206ENST00000607367 3690 ntAPPRIS ALT2 TSL 5 BASIC16.5■□□□□ 0.23
LPCAT4Q643R3 MSC-201ENST00000325509 2023 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
LPCAT4Q643R3 KCNK4-205ENST00000538767 1389 ntTSL 2 BASIC16.5■□□□□ 0.23
LPCAT4Q643R3 KLHL36-204ENST00000564996 2173 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
LPCAT4Q643R3 SLC22A1-201ENST00000324965 1521 ntTSL 5 BASIC16.5■□□□□ 0.23
LPCAT4Q643R3 AL109955.1-201ENST00000417346 1540 ntTSL 2 BASIC16.5■□□□□ 0.23
LPCAT4Q643R3 MDFIC-202ENST00000393486 4393 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
LPCAT4Q643R3 SOCS7-201ENST00000612932 7857 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Retrieved 100 of 98,524 protein–RNA pairs in 49.6 ms