Protein–RNA interactions for Protein: Q53FP2

TMEM35A, Transmembrane protein 35A, humanhuman

Predictions only

Length 167 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM35AQ53FP2 LRP4-201ENST00000378623 8076 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
TMEM35AQ53FP2 ST8SIA5-201ENST00000315087 2716 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
TMEM35AQ53FP2 VRK1-201ENST00000216639 1745 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
TMEM35AQ53FP2 DIAPH2-205ENST00000373061 4983 ntAPPRIS ALT2 TSL 5 BASIC16.64■□□□□ 0.25
TMEM35AQ53FP2 ENPP1-201ENST00000360971 7442 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
TMEM35AQ53FP2 BPIFB4-201ENST00000375483 2159 ntAPPRIS P1 TSL 5 BASIC16.64■□□□□ 0.25
TMEM35AQ53FP2 STRN4-204ENST00000539396 2608 ntTSL 2 BASIC16.64■□□□□ 0.25
TMEM35AQ53FP2 IRF5-210ENST00000477535 1374 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
TMEM35AQ53FP2 WIZ-201ENST00000263381 5695 ntAPPRIS P2 TSL 2 BASIC16.63■□□□□ 0.25
TMEM35AQ53FP2 AC139713.2-201ENST00000641328 2723 ntBASIC16.63■□□□□ 0.25
TMEM35AQ53FP2 UBFD1-201ENST00000395878 5110 ntAPPRIS P2 TSL 2 BASIC16.63■□□□□ 0.25
TMEM35AQ53FP2 CYP2W1-201ENST00000308919 2304 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
TMEM35AQ53FP2 PTPN21-208ENST00000556564 6166 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
TMEM35AQ53FP2 TRIM17-204ENST00000366698 1748 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
TMEM35AQ53FP2 TCEAL3-201ENST00000243286 1124 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
TMEM35AQ53FP2 CRELD2-202ENST00000403427 1242 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
TMEM35AQ53FP2 UBE2E1-AS1-201ENST00000426702 778 ntTSL 3 BASIC16.63■□□□□ 0.25
TMEM35AQ53FP2 GNB2-207ENST00000427895 1146 ntTSL 5 BASIC16.63■□□□□ 0.25
TMEM35AQ53FP2 CTDNEP1-207ENST00000572043 857 ntTSL 3 BASIC16.63■□□□□ 0.25
TMEM35AQ53FP2 ZNF554-204ENST00000591265 1148 ntTSL 5 BASIC16.63■□□□□ 0.25
TMEM35AQ53FP2 CHMP2A-208ENST00000601220 885 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
TMEM35AQ53FP2 IGHV3OR16-7-201ENST00000604106 360 ntBASIC16.63■□□□□ 0.25
TMEM35AQ53FP2 LCE1C-202ENST00000607093 644 ntAPPRIS P2 BASIC16.63■□□□□ 0.25
TMEM35AQ53FP2 MUC1-224ENST00000611577 1023 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
TMEM35AQ53FP2 PTPN11-207ENST00000639857 801 ntTSL 5 BASIC16.63■□□□□ 0.25
TMEM35AQ53FP2 NIPAL2-201ENST00000341166 4581 ntTSL 2 BASIC16.63■□□□□ 0.25
TMEM35AQ53FP2 POC1A-203ENST00000474012 1760 ntAPPRIS ALT2 TSL 2 BASIC16.63■□□□□ 0.25
TMEM35AQ53FP2 LINC00905-202ENST00000588117 1768 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
TMEM35AQ53FP2 CDK16-223ENST00000622098 2968 ntTSL 2 BASIC16.63■□□□□ 0.25
TMEM35AQ53FP2 OBSL1-201ENST00000289656 2274 ntTSL 5 BASIC16.63■□□□□ 0.25
TMEM35AQ53FP2 SEMA6B-201ENST00000586582 3986 ntAPPRIS P2 TSL 1 (best) BASIC16.63■□□□□ 0.25
TMEM35AQ53FP2 CDC25A-201ENST00000302506 3783 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
TMEM35AQ53FP2 GYPC-202ENST00000356887 2067 ntAPPRIS ALT2 TSL 1 (best) BASIC16.63■□□□□ 0.25
TMEM35AQ53FP2 PILRB-208ENST00000452089 2099 ntAPPRIS P2 TSL 2 BASIC16.63■□□□□ 0.25
TMEM35AQ53FP2 GMDS-AS1-201ENST00000456943 2308 ntTSL 2 BASIC16.63■□□□□ 0.25
TMEM35AQ53FP2 WDR13-201ENST00000218056 2124 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
TMEM35AQ53FP2 TINF2-201ENST00000267415 1852 ntAPPRIS P4 TSL 1 (best) BASIC16.63■□□□□ 0.25
TMEM35AQ53FP2 P2RY6-202ENST00000393590 2398 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
TMEM35AQ53FP2 XKR6-203ENST00000416569 3382 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
TMEM35AQ53FP2 PRR29-AS1-202ENST00000580942 2926 ntTSL 2 BASIC16.63■□□□□ 0.25
TMEM35AQ53FP2 GCSH-209ENST00000639689 2412 ntTSL 5 BASIC16.62■□□□□ 0.25
TMEM35AQ53FP2 TMEM25-225ENST00000533102 1410 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
TMEM35AQ53FP2 HFE2-201ENST00000336751 2234 ntAPPRIS P1 TSL 2 BASIC16.62■□□□□ 0.25
TMEM35AQ53FP2 MUM1-216ENST00000627377 2235 ntAPPRIS ALT2 TSL 5 BASIC16.62■□□□□ 0.25
TMEM35AQ53FP2 WDR90-202ENST00000315764 1454 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
TMEM35AQ53FP2 CHGA-202ENST00000334654 1474 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
TMEM35AQ53FP2 TUBB2B-201ENST00000259818 2020 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
TMEM35AQ53FP2 PCDHA13-201ENST00000289272 5260 ntAPPRIS P2 TSL 1 (best) BASIC16.62■□□□□ 0.25
TMEM35AQ53FP2 EPHA10-201ENST00000319637 2050 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
TMEM35AQ53FP2 TRIB3-202ENST00000422053 1533 ntAPPRIS ALT2 TSL 2 BASIC16.62■□□□□ 0.25
TMEM35AQ53FP2 TMUB2-213ENST00000589856 1505 ntTSL 2 BASIC16.62■□□□□ 0.25
TMEM35AQ53FP2 ATPIF1-201ENST00000335514 494 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
TMEM35AQ53FP2 ASGR1-202ENST00000380920 944 ntTSL 3 BASIC16.62■□□□□ 0.25
TMEM35AQ53FP2 FOXD3-AS1-201ENST00000418244 941 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
TMEM35AQ53FP2 RBSN-204ENST00000449050 903 ntTSL 2 BASIC16.62■□□□□ 0.25
TMEM35AQ53FP2 AC125616.1-201ENST00000540369 1015 ntTSL 3 BASIC16.62■□□□□ 0.25
TMEM35AQ53FP2 RAP1B-229ENST00000543393 874 ntTSL 3 BASIC16.62■□□□□ 0.25
TMEM35AQ53FP2 AC026336.2-201ENST00000563922 763 ntTSL 2 BASIC16.62■□□□□ 0.25
TMEM35AQ53FP2 PRELID1P1-202ENST00000567272 903 ntBASIC16.62■□□□□ 0.25
TMEM35AQ53FP2 PRR29-207ENST00000580752 458 ntTSL 3 BASIC16.62■□□□□ 0.25
TMEM35AQ53FP2 AC008105.3-202ENST00000585471 1077 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
TMEM35AQ53FP2 REXO2-220ENST00000611665 1158 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
TMEM35AQ53FP2 AL162497.1-201ENST00000615635 518 ntTSL 4 BASIC16.62■□□□□ 0.25
TMEM35AQ53FP2 MED16-213ENST00000616387 1078 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
TMEM35AQ53FP2 SERPINB6-207ENST00000612421 1570 ntTSL 2 BASIC16.62■□□□□ 0.25
TMEM35AQ53FP2 ASPRV1-201ENST00000320256 2177 ntAPPRIS P1 BASIC16.62■□□□□ 0.25
TMEM35AQ53FP2 GJA8-201ENST00000369235 1302 ntAPPRIS P1 BASIC16.62■□□□□ 0.25
TMEM35AQ53FP2 LAT-203ENST00000395456 1616 ntAPPRIS ALT2 TSL 1 (best) BASIC16.62■□□□□ 0.25
TMEM35AQ53FP2 TBPL1-208ENST00000613034 1625 ntAPPRIS P1 TSL 2 BASIC16.62■□□□□ 0.25
TMEM35AQ53FP2 ING5-201ENST00000313552 5196 ntAPPRIS P3 TSL 1 (best) BASIC16.62■□□□□ 0.25
TMEM35AQ53FP2 CXorf67-201ENST00000342995 1929 ntAPPRIS P1 BASIC16.62■□□□□ 0.25
TMEM35AQ53FP2 A4GALT-202ENST00000381278 1935 ntAPPRIS P1 TSL 5 BASIC16.62■□□□□ 0.25
TMEM35AQ53FP2 TM2D3-201ENST00000333202 1381 ntAPPRIS P4 TSL 1 (best) BASIC16.62■□□□□ 0.25
TMEM35AQ53FP2 PDE9A-203ENST00000335440 1728 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
TMEM35AQ53FP2 TCIRG1-201ENST00000265686 2677 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
TMEM35AQ53FP2 PRMT2-203ENST00000355680 2688 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
TMEM35AQ53FP2 KXD1-201ENST00000222307 1426 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
TMEM35AQ53FP2 AL645608.8-201ENST00000606034 2086 ntBASIC16.61■□□□□ 0.25
TMEM35AQ53FP2 RUVBL1-201ENST00000322623 1761 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
TMEM35AQ53FP2 MIPEP-201ENST00000382172 2400 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
TMEM35AQ53FP2 CCDC188-201ENST00000439765 1475 ntAPPRIS P1 TSL 5 BASIC16.61■□□□□ 0.25
TMEM35AQ53FP2 KLHL21-202ENST00000377663 6445 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
TMEM35AQ53FP2 PKD1P1-201ENST00000458669 6805 ntBASIC16.61■□□□□ 0.25
TMEM35AQ53FP2 TFAP2E-201ENST00000373235 2189 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
TMEM35AQ53FP2 USH1C-205ENST00000527020 2159 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
TMEM35AQ53FP2 HNRNPUL1-203ENST00000378215 2864 ntTSL 2 BASIC16.61■□□□□ 0.25
TMEM35AQ53FP2 C11orf68-203ENST00000530188 1528 ntAPPRIS ALT2 BASIC16.61■□□□□ 0.25
TMEM35AQ53FP2 MOGS-205ENST00000452063 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC16.61■□□□□ 0.25
TMEM35AQ53FP2 PNPO-201ENST00000225573 2256 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
TMEM35AQ53FP2 MTG1-201ENST00000317502 1560 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
TMEM35AQ53FP2 CTSB-232ENST00000534510 1989 ntAPPRIS P1 TSL 5 BASIC16.61■□□□□ 0.25
TMEM35AQ53FP2 HHIPL1-201ENST00000330710 7390 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
TMEM35AQ53FP2 NSDHL-203ENST00000440023 1630 ntAPPRIS P2 TSL 5 BASIC16.61■□□□□ 0.25
TMEM35AQ53FP2 PSMA7-201ENST00000370858 925 ntTSL 2 BASIC16.61■□□□□ 0.25
TMEM35AQ53FP2 PSMA7-203ENST00000370873 996 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
TMEM35AQ53FP2 ANKRD13D-218ENST00000515828 1111 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
TMEM35AQ53FP2 AP1S2-206ENST00000545766 576 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
TMEM35AQ53FP2 AC079385.1-201ENST00000551505 570 ntTSL 4 BASIC16.61■□□□□ 0.25
TMEM35AQ53FP2 GSTZ1-207ENST00000553586 979 ntAPPRIS ALT1 TSL 5 BASIC16.61■□□□□ 0.25
TMEM35AQ53FP2 METRN-205ENST00000568415 612 ntAPPRIS ALT2 TSL 3 BASIC16.61■□□□□ 0.25
Retrieved 100 of 98,524 protein–RNA pairs in 38.5 ms